Nucleotide Global Alignment
Description
- Query:
- TRCN0000478282
- Subject:
- NR_144394.1
- Aligned Length:
- 3279
- Identities:
- 188
- Gaps:
- 3064
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 TTTTTTTTTTTTTTTTCTAATTTTTGGTTGGTGGCGGCGGTGCTGGGCCAGGGGAAGGAAGGGACACGGAGGCC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GCCCTCGCCCCGCCACCTCCTACCAGCTTCCCCCCAGCCCCGGCTCCGGGAGATGTGCCGGGCGGGGGGCCCGG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GTTCGCCGAGCCGCAGGAGAGACACGCTGGGCCGACCCCAGAGCGGCGCTGGACAGGAAAACATTTAAAGTTGA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 TGATATGTTATCAAAAGTAGAGAAAATGAAAGGAGAGCAAGAATCTCATAGCTTGTCAGCTCATTTGCAGCTTA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CATTTTTGGTTTCTTCCACAAAAATGATAAGCCATCACCAAACTCAGAAAATGAACAAAATTCTGTTACCCTGG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 AAGTCCTGCTTGTGAAAGTTTGCCACAAAAAAAGAAAGGATGTATGTTGTCCAATAAGGCAAGTTCCCACAGGT 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 AAAAAGCAGGTGCCTTTGAATCCTGACCTCAATCAAACAAAACCTGGAAATTTCCCGTCCCTTGCAGTTTCCAG 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 TAATGAATTTGAACCTAGTAACAGCCACATGGTGAAGTCTTACTCGTTGCTATTTAGAGTGACTCGTCCAAGAA 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 GAAGAGAGTTTAATGGAATGATTAATGGAGAAACCATGAAAATATTGATGTCAGTGAAGAGCTTCCAGCCAGAA 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 GAAAATGAAATCGTGAGGATGGGGAAAAGACATTTGTTGCACAAATGACAGTATTTGATAAAAACAGAGTTTCA 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 CTCTTGTTGCCCAGGCTGGAGTGCAGTGGCATGATCTGGACTCACTGCAACCTCCACCTCCCAGGTTTAAGCAG 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 TTCTCCTGCCTGAGCCTCTCGGATTACAGATGTCAGTACTTTGTGTGCTCTTGAAATAGGAAATGTACAGATCC 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 CTATTGCCAGACACATCATTCTCTCCATCCAGAAAGCCAACTTTGCAAGGACAAAAAAAAAAATTAGTGTGAAA 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 CAAAATGTGGCTTTTCCAAAGACAGATGTGATTATTTATAGTCAATGTGGCCTCAAAATGTCATTGATTGTGAA 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 ATAGCAAACATGCAGGATCATAATATTTGGACGGAATCTTGCACTGTCTCCCAGGCTGGAGTGCAGTGGCACGA 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 TCTCTGCTCACTGCAACCTCCGCCTCCAGGCTTCCAGTGATTCTCCTGCTTCAGCCTCCCGAGTAGCTGGGACT 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 ACAGGCGCACCTCACCACACCCAGCTAATTTTTAGTATTTTTAGTAGAGACGAGGTTTCACTATGTTGGCCAGG 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 ATGGTCTCGATCTCCTGACCTCGTGATCTGCCCACCTCGGCCTCCCAAAGTGCTGGGATAATATGCATGAGCCA 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 CAGTGCCCGGCCTATGCTTTTTTTCTTTTTTTTGAGACGGAGTCTCGCTCAGTCACCCAGGCTGGAGTACAGTG 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 GCGCGATCTCAGCTCACTGTAACCTCTGCCTCCCAGGCTCAAGCAATTCTCATGCCTCAGCCTCCTGAGTGGCT 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 GGGATTATAGGTGTGTGCCACCACACCCTGCTAATTTTTTTTTTCTTTTTGAGACGGGTCTTGCCCTGTTGCCA 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 GGCTGAAGTGCAATGGCTCACTGCAACATTTGCCTCCCGGGTTCAAGTGATTCTCCTGCCTCACTCTCCCTAGT 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 TGCTGGGATTACAGGTGTGCACTACCACATCCAGCTAATTTTTGTATTTTTAGTAAAGATGGGGTTTCACCATG 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 TTGGCCAGGGTGGTGTCTTGATCTCCTAACCTTGTGATCCACCCACCTCAGCCTCCCGAAGTGCTGGGATTACA 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 GGCGGGAGCCATTGCGCCTGTCCTAATATTTGTATTTTTAGTAAAGATGGGGTTTTACCAGGTTGACCAGGCTG 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 GTCTCGAACTCCTGACCACAAGTGATCCAACCGCCTCGGCCTCCCAAAGTGCTGGGATTACAAGTGTGAGCCAC 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 TGCGTCCAGTCTCTTGGCCTCTAAAATTTTTTTTTTTTTTGAAACGGAGTCTTGCTGTGTCGCCCAGGCTGGAG 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 TGCAGTGGCGTGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCG 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 AGTAGCTGGGACCACAGACACCCACCACCATGTCCGGCTAATTTTTTTATTTATAGTAGAGATGGGGTTTCACC 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 ATGTTAGCCAGGATGTTCTCAATCTCCTGACCTCGTGATCCGCCCGCCTCAGCCTCCCAAAGTGCTGGGATTAC 2220
Query 1 ---------------------------------------------------------------------ATGGA 5
.|.||
Sbjct 2221 AAGTGTGAGCCACCGTGCCTGGCCAGGCCTCTAAATTTTTAAGATTTACTTTTTAATTTTGTGTGTGTGTTTGA 2294
Query 6 GTCTCA--TTC-----TGTCGCCCAGACTGGAGTGAAGTGGCATGATCTCGGCTCACTGCAACCTCTGCCTCTC 72
|.|.|| ||| |||.||||||.||||||||.|.||||||||||||.||||||||||||||||||||||.
Sbjct 2295 GACACAGTTTCGCTCTTGTTGCCCAGGCTGGAGTGCAATGGCATGATCTCAGCTCACTGCAACCTCTGCCTCTT 2368
Query 73 GAGGTCAAGCGATTCTCCTGCCTCGGCCTCCGGAGTAGCTGGGATTACAGGCACA--CGCAACCATGCCCGGCT 144
|.|.||||||.|||||||||||||.||||||..|||||||||||||.||||||.| .||.|||||||||||||
Sbjct 2369 GGGTTCAAGCAATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGATTGCAGGCATATGTGCCACCATGCCCGGCT 2442
Query 145 AATTTTTTTTGTATTTTTAGTAGAGATGGGGTTTCACCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAA 218
.| |||||||||||||||||||||||||||||.||||||||..||||.||||||||||||||.|||||||.
Sbjct 2443 GA----TTTTGTATTTTTAGTAGAGATGGGGTTTCTCCATGTTGCTCAGGTTGGTCTCGAACTCCCGACCTCAG 2512
Query 219 G------------------------------------------------------------------------- 219
|
Sbjct 2513 GTGATCCACCTGCCTCGGCCTACCAAAGTGCTGGGGTTACAGGTGTGAACCACTATGCCCAGCCTAAGATTGAC 2586
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2587 TTTTGAGAGATACTCTACTTACCTCTACTTACCAAGAGGAAAAGAGATATAAACATATTAAATAACAAGCATTT 2660
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2661 TATATACATTTCCCAGTTAATCTACGTAATAACCCTGTGAATACAGATGAGAAAACTACAGCTACAGGAAATAA 2734
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2735 AGAAGCCTTCCCACAGTAACACTGCCTATAAATGACGGAATAAACTCAGGATGTTTTGAATTCAAAGCTTATGT 2808
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2809 ATGCTCTATGCACTTCACTCTGCTTCCTGAGGCAGGTGAGATGTTTTAATATCTACTTGCCTGAATGTTAATGT 2882
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2883 CTGCCCACAGAAATAAGTCGGAGCTCTGGAGTAGAGAACACCCGATGATTCAGAATCGTTCCGAAGTGCTATAT 2956
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2957 TTCTTCGACTGCTCAGACTGTACCCCTCAAAACCAGCTGTCCACTCTTTTTCAAAGCAAAGATATTGAAAACTG 3030
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3031 TTAGAATCTCTTGAGGGATATCTTCAATACAGACACGTTAAATAAAACATGGAAATGGGAGACTACTCTTAGGG 3104
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3105 GCCATGGTCAAGTTCAATAAAATAAAAGATTCCATTAACAGGGTATCATGATCAGTCCCACAAATTACAAAAGA 3178
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3179 TTTTAGTATATTCCTGCATAATTTTGACATAATAAATCACACAAGTGTTATCTCTTATCTAATAAAATCATTGT 3252
Query 220 ----------------------- 219
Sbjct 3253 ACAAGCAAAAAAAAAAAAAAAAA 3275
