Nucleotide Global Alignment
Description
- Query:
- TRCN0000478282
- Subject:
- NR_146580.1
- Aligned Length:
- 4988
- Identities:
- 190
- Gaps:
- 4771
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 CTTCCGCCCGCCTCTTCAACGCGCACGCTGCTACCGAGCTGCAGGAGGCCGCGGGCGCGAGACTGGGAATGCGC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 AGGGCCCCCGCCTGGCTCTACAAGCCCGGGCCGCGGCCCCCGCCTTCCCCGCCGCCTCCCGGCGCTCCGTGCCC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GCCCCACGAGGCCGGCGGCTGCTGCTACCTGGGGCCGTTGCTGCTTGTGCCGTGAGCGACGGCCAGCCATTGTC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CCCGCCGCTCCGTCAGCCGCGCCCGGCCGCGCGCGCACCGGAAGGCGCATTGGCGTCTTGCGGGCTCCGGGCCG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GGTGGGCAGGATGGCCTCCACAAGCCGCATGGCGCGCATGGGGAGCCTCCGTTGATGCCGCCGCGCCGCCCTCC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 GAGGCTGCATCCGCGGAAGCCCGGCTCCCCGAGCGCTCCGGCCCGGCCCGGCGCCCCGGACCTGAGTGCGTCCC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CATGAAGGCGCCCGGGCTGGCCCAGGCGGCCGTGGCAGAGGAGACCCCGGACTGGGCGCCCGAGCTCTGCCCCA 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GCCCCGAGTCGCGGTCGCCGGAGCCGCCTGCCAACCGCCTTCAAGACTTCGACACGCTGGTCACCGTGGGAAAG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 CAACTAGAAGCCATTTGTGTCAAGGTAACGTCTGGAGAAACAAAAGGTCAGGAACGGCCAACGTCCCTACTGGC 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 CACAGTCTAGCCCCAATCTGCAAGACAGAGCCAGCCGCCCCGGGGGAATTCCCGCCTGGTGGGACTCCACGTCA 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 CCAGCCCCCAGCTGCTCAGGGTACAGCCCCTCGTGAGAACCGAGCCACAGTCATGTTTCCTACATCAGCCTCCT 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 GCTCAGGGGTTTGTACAGAGACCACTGCCAGCCCTCTAGGTGGTCCCTGCAAAGAAAGTCCCAGCTCCCAAGGC 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 TCCAAATGGACAGGGCACCATGTTGACCCCTTCGTTGGCCTCCAGTTCGCCGACTGTAACATGTTTCATCCAGT 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 TCAGGACGTTTATTTATTTCCAACTTGCATACAAAACATACTGAGAAACTAAAACCATCGTTAAAAGTGAAGAC 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 ACGTTGAGACAGGTATCTCGACCTGCCAAGTATACAGCTAAAGCTGAGTTCATAAAAAGGGATGATTTGGCCGA 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 CGGTCATCTGCCAGATTCTGATGATGATTCAGAAGTCAGTGTGGAAGAAGATCAGAGGGAGAGGCAGGCGCTCT 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 TTGACTTATCAAGCTGCTCCCTGAGGCCCAAAAGCTTCAAGTGTCAGACTTGTAAAAAGTCATATATAGGGAAG 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 TGGGGACTGGCCCAGCATTTTAAACTTAATCCAGGCCATGGCCAGCTGGACCCTGAGATGGTGCTATCTGAGAA 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 AGCCAATGGGAGCACCCTCCGGGGGTGCACAGAGGAAAGGACGCTCAGCCTGACCTTCCCGAGGCTGTCCGTGC 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 CAGCGGCTCCGCGTGAGGGAGGGGCCCGCTCCTGCTTGGTGAGAGAGTCAGCACGCGGTGGCCTGGTCTCACTC 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 TGTCGCCCAGGCTGGAGTACAGTGGAGCAGTCTGAGTTCACTACAACCTCCACCTCCCAGGTTCAAGTGATTCT 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 CCTGCCTCAACCTCCCGAGTAGCTGGGACTACAGTCACGTACCACCAGTTGAAAAAGATCATCTAGCAAAGCCT 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 TTTTTCCCAGCTACATATAAGGAATTTGAAAGTCGCATAAAATGGTTAAGAAAATGTGCCAAGATTACCTCAGT 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 AATTCTGGTCTGTGTTCTCAGGAGACCCTGGAAATAAACAATGTGTCTTCTGTGGCTTCAGCGTCACCTAGTGC 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 AGGCTGCCATTCAACAAACGCATTGTCAACAGTCAACCAAAAGAAACCCATTGGCCACCATACCCTGAGGACTA 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 ACCCTGACACAGATGCCCTTCCAGATGCCCTCAGTAGTCTAACTGATTCCATCGCCCCAGCCTTGGGGGAGAAG 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 CACTGCTGCCTATGCACTCCATTTACAGGTGAACTGTCACCCCTACAACTCAGCTTGCAACCAGCCCTGGCCAC 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 CACCAGTTTCCCCACACTGAGCTGAATATTGGACATGCCCATCTTAGACATTCCAGCCCATTCTGAAATTCCAC 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 ATCGATTCACCCGACAAAGTCTGAAGTTCCAGGGCAATTTATCTGGAAAAGCTCACCTGGAATCATGTGTCATT 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 TCAACCAACAACTGTTGAAGAGGACGTGGCATCAAAACCAAGTATTGGAGACCAGGAATCTGAGATCAAGGTGT 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 GGGCAGGGGTGCGCTCCCCCTGGAGGTTCTAGGAGAGGATCCTTCCTGCCTCTTCCAGCTCCTGGTGGCTCCAG 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 GTGTCCCTGGGCTTGTGGCCACATCACTACATTCTCTGCCTCCATCTCCACGTGACCTTTTCCTCTGTGTCTGT 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 GTCTCCTCTTCTGTCTCTTAGAAGGACACTGGTCATTGGATTTAAAGGCCACCTGGGTAATTTATAGTGATCTA 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 ATCTCAAGAATCTTTCCTTAATTACATGCAAATACTCTTTATCCAAATTAGTTTGCATTCACAAATTCTGGAGC 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 TTAGTACTTGGACATATATTTTGGGGGGTTGATGGTTGGAGGGGCTTTTATTCAACTCAGTACATCTTAATAAG 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 GAATTAATGCCCCCCAACTTGCCTTACAAGTCATATATTAAAAACAATGTTGGCCTGGCACAGTGGCTCATGCC 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 CGTAATCTCAACACTTTGGGAAGCCAAGGGAGGAGGATCACTTGAGCCCAGGAGTTGGAGACCAGCCTGGATAA 2738
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2739 CAAAGGGAGACCCAGTTTCTACAAAATATTTAAAAATTAGCCAGGCATGATGGTGCATGCCTGTGGTCCTAGCT 2812
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2813 ATTCAGGAAACTGAGGTGGGAGGATCACTTGAGCCTGGAAGTTCAAGACAGCAGTGAGCTATGCTCACACCACT 2886
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2887 GCACTCCATCCTGGGCAACAGAGCTGGACTCTGTCTCAAAAAACATAACACTAAAACATCAAAATTAAAAAAAA 2960
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2961 AAAAACAATGAAAGTAGCCTCCACTTACAAACTAATTACTCTTTCTTGAAAATATTACACTTTTTTTCTTCTAT 3034
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3035 ATCTCTACTCCTAGCTCTCAACACCTTTCTTAAGCCCACATCATAACCTGTCTTGCATAACTTTGTGAGTGCCC 3108
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3109 AACGTTTCACTGTACAAGATTGTAGAGCTGCATGCTTCTTAAGAATAAATCCACACTTTAGGTACCAGTAAATC 3182
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3183 CATGCAATGCCTCAGACGTTATAACCAAATAATGCCTGGAAAATCGACATGAATTTATGTGAAGCATAAGCCTT 3256
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3257 TAATTTTTTTAAAGAAAAGTAGATTGCTGTTTTTCCACATCATTTCAGAGCCGTTCTCTAGTTTTGCATGCCCT 3330
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3331 TTACTGCAGAACCATACAGATTTTGTTCTCCATTTCATACATCATTTGTTGAAATGCCCTTTAAAATGTAACGG 3404
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3405 AATATAGAGCTTTATGGGAAAAAATGCTGTAGAAAATAAATTATCTTCTCTCTTTGTATTGGGAACCAAAAGGT 3478
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3479 CTCACCTTATTAATGACCACAGAGACTCTCCTAAAGCAATTCTGGAAGTCAAAACAGCTGGAGTCTAGTTTAAT 3552
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3553 GGGAACCCTCATTAATTAGACAAGAACACCAAGGCTATGACCACAGCAGCTGGTAGCAGCAGCCCTGCAGTGAA 3626
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3627 GTAGACTCTCAGAGGACACAAGGAAAGAGTGTATTGATAAGAAATCTACAGCAAAGGTGTAGCACATCATCATT 3700
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3701 TGATCTTGATACACTTGACTGTGGGCAAAGTACCTGTTATGTAAAACATGCTTTGTTAGTTAGGGCCATGATAA 3774
Query 1 ----------------------------------------------------------------------ATGG 4
|..|
Sbjct 3775 GCTGCTTAAGCTGATGAATGAACACCAAATCTCAGTGTTTTTTTTTTTTTTTTTGGTTTTTTTTTTTGAGACAG 3848
Query 5 AGTCTCATTCTGTCGCCCAGACTGGAGTGAAGTGGCATGATCTCGGCTCACTGCAACCTCTGCCTCTCGAGG-T 77
|||||||.||||||||||||.||||||||.|||||..|||||||.|||||||||||.|||.||||| |.||| |
Sbjct 3849 AGTCTCACTCTGTCGCCCAGGCTGGAGTGCAGTGGGGTGATCTCAGCTCACTGCAAGCTCCGCCTC-CCAGGTT 3921
Query 78 CAAGCGATTCTCCTGCCTCGGCCTCCGGAGTAGCTGGGATTACAGGCACACGCAACCATGCCCGGCTAATTTTT 151
||.||.|||||||||||||.||||||.||||||||||||.|||||||.|.|||.|||||||||.||||| ||||
Sbjct 3922 CACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCATGCCCAGCTAA-TTTT 3994
Query 152 TTTGTATTTTTAGTAGAGATGGGGTTTCACCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAAG------ 219
|||||||||||||||||||.|.||||||||||||||.||||||.|||||||.|.||||||||||||.|
Sbjct 3995 TTTGTATTTTTAGTAGAGACGAGGTTTCACCATGTTAGCCAGGATGGTCTCAATCTCCTGACCTCATGATCCGC 4068
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4069 CCGCCTCAGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCACCCAGCCCGTATTTTTTTTTCTAACA 4142
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4143 AATACCTGGTGTTAAGCCCAAAGTGTGTGTTTCTGGTTGGCTGGTGATGCTCTTTCAAGTCCTGAATCAGGGAC 4216
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4217 CCAATAACTTTCAACATTGTGGCTCAGCTCTCTTCAACAGCTGCCTCCAAGTTCTCTTGAGATATTGGTATTTA 4290
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4291 TCAGAGGAGAGGGGATGGAGAAGGTATATGCCTTTGCTAGAGCTGCCATAACAAAGGACTGTAGACTGAGGGGC 4364
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4365 TTAAACAACAGAAATTTATTTCCTTACAATCCTGGAGGTCGGAAGTCTGAGATCAAGGTGTGGGCAGGGCTGGT 4438
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4439 TCCTCCTGAGGCCTCTCTCCTTGGCTTGTAGACTCTGTGTTCTCCCTTTGTCCTCATACAGTCGTCTCTCTGTG 4512
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4513 TGTGTCTGTGTCCTCATCTCTTCTTATGAGGTGTCTTAGTCCATTTCAAGCTGCTATAACAGAACACCATAGAC 4586
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4587 TGCAGGGCTTAAACAACAGACATTTATTCTCCCATTGTCTTGGAGGCTATCTATCTACCTATGTAGCATCTATC 4660
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4661 TACCCATCTATCTATCATCTGTGTATAATCTACCTATTATCTATCTATCTACTTATCATCTACTTATCATCTAC 4734
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4735 CTATCATCTGTCTATTTTTCTGTCTATCATCTATCTACCATCTATGTATCTACCTATCATCTAGCCATCTGTCA 4808
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4809 TCTATCATCTATCACCTATCATCTATCTGTCTCACCTATCATTTATCTATGTATTTGTGTATCATCATCACCCA 4882
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4883 GCTATGAACTATCTATCATGTATGATGTATCTATCATCTATGTATCTACCTATCTGTTATTTTGGTCAAATATA 4956
Query 220 ------------------------------ 219
Sbjct 4957 CATAATATAAAACTCACCATTTTAACCATT 4986
