Nucleotide Global Alignment

Description

Query:
TRCN0000478282
Subject:
NR_149040.1
Aligned Length:
5461
Identities:
188
Gaps:
5246

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATTTTTAAGTCAAATTGTTTATGTAGACAGGAACCCAACAAAAATATTTGCCCAGGACCTTGCGCGCCCTAGAA  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  GTGGCTCTGGAGAAAAGCATTTGCCTACAGAAATAAACCATTTCCTTCCTCAGCCTATATCAGTAACAAAGGTG  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  CAGCTTTGGCCACTATCTGCCACTCCTTTCTCTTATTCCTCTGTTTGTTTAGAAGCGGATCAGGAAAGAGGGAC  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  ACCATTTCCTCAGATCCCTCAAAGTCCCCAAAAAAGAACTCAATAAGCATTAGCTGTTATCATTTTTCAAGCTT  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  TCAGGTTGTGTTTTATTTTCCGTTTTTCTCCTTTCCTTTCATTCCAAAAAGCCTCCTTTCTTTAATTCTATAAG  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  CTCTTCTTTGGTCCCTGAGAGATTCTTGTTTGTTTATTTTTGTTTGTTTTTTTACAATTATTCCAGAGATCTGG  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  ACAATCTCTAGCACAGAAAAAAAAAATTCCCTTCCTTCTTAGCATCCTTCAGTAGTTGGACTCGGTGAAAATTC  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  CACTGCCCCCAGCCCTTTGCAGCACTGCTCTCAAGGCCAGTAGGCTGTACCTGGGCCCTGACTTGAGAGGAAGA  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  TCACAAGAGAAGAGCATTCAGTGGGTTAAAAAAAACAGATCCGAAGGATGAAGGGAATCTACCTTCAGATTGGA  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  ACCGAAGGTCAAAGGTTCTAGGAATGAAGGTATTCAACATGGCAACGCTGGAAGCAAAGTAAACGTTCAACAGC  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  TGGATGATGATAAAGTAAGTGACCTTGAAACCAATAGGACAACATGGAGCTCATTACGATTATGTTTAGGGAGA  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  CCAGGAGGAGACATGGAATAGGGCTTATGTGCAATAAAACAGAGAGGAAAGGAGGAGGCAATTTATAAATGCAT  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  GTCCTCTGATTGTGTAAAATTAGGCATCTGTTAAAAAGACGGGAATGAGGTAATAATAGAGTTAACATGTTAGA  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  GTAATTGGATAATAGTATTAGTTGTTTCTTTTCTCTAACTGAATATAATATATTACTTTTATAATTTAGTAAAT  1036

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1037  TTGTTCTTTTCAAAGGAGGTACACCCATGCCTTTCTCCTGGCTATCTGCAGCTCAACAATGAGGGACTTGGGCT  1110

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1111  CCCCAGGCCTCCATCACACTAAACAGTCCTGGCCGACTATGATACCCTTCCTCTTTTCTCCCTAATTTGTTGTC  1184

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1185  TATTACAGTTTGCTCCGTGGACGTGTGAAGCAATCTCTGGGGGTGGAGCTGAGGAATCTGCATTATTAACAGTT  1258

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1259  TCCTGGGAGATTCTTACACACACTAAAGTTTGGACAAAGATTGCTTATTTTTTCTGCCAAAAATCTTAACCACA  1332

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1333  CAGGGACTTGCACGATCTATGTTATTTCTTGAAGCAAAGTTAATCCACCGATATTATGCCTTGTGTGTATGTGT  1406

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1407  TTTAAGTGCCCAGTGAACACAGTTCCATTTATCCTCAAATATTTTTGTGTAGAAATTTTCGATTATAATTTATT  1480

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1481  CATGGTTTTTGCTTAGAAAGCCACCTTATAAGCAAGGTATCCTGTCATAGGATCACTACTTTCTTTCCCTCTGT  1554

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1555  TTTGAGTCCTGCCATAATTAGGGCTGAGTGACTTTTCGGGACACACTTTACTTTGTTTCTTTGATCACAACAGA  1628

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1629  GAACACAGGACTCTCGGGTCCTGAGGCTGGCTGAAGGGTTTCAGTTTTCCTTAATTGTCTATCATTATAGGACC  1702

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1703  TGGAAATACCCACTCATGATCCCACTGCTTCCAGCCCTCAAACTAAGAATGGAGTCTCTAGTCGTGCACATTCC  1776

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1777  TGGGCCTCAGGGCTCACAAGGCAGTGAGGCTGAGGTGGGGCGGCCTGTCTGCGTCTGCGTCCCAGCAGAGCCTC  1850

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1851  ACAGGTCCTCGCTGGCACTGCAGGAAGGAGGCCCCTCTGAGGCGAGGAGTGTTCTGACCTACAAGGCTGTCCAA  1924

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1925  TCTTTTGGCTTCCCTGGGCAACATTGGAAGGAGGAAAATTGTCTTAGGCCACACATAAAATACACTAATGATAG  1998

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1999  CTGATGAGCTTTAAAAAAAAATGCAAACAAATTTCATAATGTTTCAAGAAAATTTATGAATTTGTGTTGGGCCA  2072

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2073  CATTCAAAGCTATCCTGGGCTGCATGCAGCCTGTGGGCCATGGGTTGGAGAATCTTGCTTTATGATTTTACTCA  2146

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2147  AGACAGAAACTAAGTGCTAACATTTCCCCCAATCACAATTCTATTTTACCTTTTTAAAAACTCTAAAGGGCAAG  2220

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2221  AATTTTGCTAATCTTTTCTAGAAATATAAAAACAAGCAAATATGTTTTCTAAAACAAACCAAGGCTTTTCTCCT  2294

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2295  GGGGAATTTGCAGGCATAGCACGAACTCCTTCCTCACTGCTATTTCTTGAGAGGGGCTGTTAGGCTGTGCTGTG  2368

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2369  CTCTGCTTAAGGACGAGAGGCCAGGTACACAGCCTGAGAGGCCAGTCATTGTGCCATGTTGTTGTCAGGAGTTC  2442

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2443  CCAGTGTCCATCTTGATAAGGCTTTGCTAAAACATACTAATACAAACTTCCATTACCTCCTGTGTTTCTAAATA  2516

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2517  AACATACCAAGTTATTTTAAGACTCATGTTTTCCTTTATAATCATTTGAAATTTCTGCCTAGTGTGAAACAACC  2590

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2591  ATCTAGATTCTCACAGAATTCATGAATAATACTGAAATCCACTCTCCTAAACAGCAGCAGTTTCAAGTAAGTCG  2664

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2665  TGCAGTAAACACAATGTCCAAATTTATTTTTAAAGCTTTGAAGATAAATGATGAAGCCTCCTATGAGATTATCT  2738

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2739  TTTATGTAGCGGAAGAAAAGAATCCTTGAGGGTCAAGTTGCTAGGGCAGTCACAGAAGCCAGAGCCATGGGCCA  2812

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2813  GGAGGTCCTGAGGCCTCTCTGAAGGATGTGCGTGGTCATCCACTATGGGTGCAGCTGGTGTTGAGAAACTAAGC  2886

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2887  TGATGCACCACCTCTGTTGTTCCAAGGCTAGACCAACAGTGGGCATTCTCTAGATCTATTGTCTCCTTTACGTA  2960

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2961  TTAGGGGGAAAACCACTTCTACTGTGCAGGGATCTGCCCCTTTAAACACATAAATACCACTTAATCCACTGCCC  3034

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3035  TCAACAGAGGAAATGACCACTGGCCTGGAGGCCTCCAAAATTCCTTCTCTTTTTCTTTCTTTCAAGTCAAAGGT  3108

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3109  CATGGTTCATTTCGAGTTCCAATGCTATTTTCTAAATTTTGTTTTAATCCAGATCTCATGACTTATTTCTCATT  3182

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3183  CTCTTTCCTTCCTGAACAATTCAGTGCTAAAACCATTAGGTAGGGCAGAGCGAAGACTGTATGGGCGCCAGGGT  3256

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3257  GAAGGAAACCACAGTGGCACAGAGTGCAGTGCCTGCATCAGGACAGGGTCAGGAGGCAGTCCTGCAGAGGGGCA  3330

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3331  GCTCAGCATGGTGTGTTCAAGTCCTACAGAGTATTGGAGCCCAAAGGAGAAAAGTAACTTTACAATGGGAATGG  3404

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3405  CTGGCAGACATCACCTGACTCAAGTGTCAAAGTGAAGAAACATCATCAATGATGTTTCCATTAAATGGAAATCC  3478

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3479  TGTGCCACCTGACAAGAGGCATTTAGGACTTCTGTGATATTCCCTCTAAAGATGCATCACCTGAATCTGACTAT  3552

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3553  GAAGAAACATCAGAAAAACTCAAATTGAGGAACACTCTGCAAGTTCCCTCAAAACCCTGGCAATGGCAACTAAA  3626

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3627  AAGATGGCTTTTGTGAGAAGAGCGATTGGTGTCCACACCTGCTGGTGCTGAGCACAAGACAATGCACATGTGTT  3700

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3701  CTCTTGAAGGAAGAAACTTTAGAAACGTCATCTTCAAGGTGTCAATGACTTGTCTACTATAGCTGCTGCCTCAG  3774

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3775  CGTCCACTTTTAGACCCGGCATCAGCTGTGTGAAACCCAGTCGCACCCTGCCACCTTTGGTCTAGGTGTGACTT  3848

Query    1  ------------------------------------------------------------------ATGGAGTC  8
                                                                              ||||||||
Sbjct 3849  CTCTTCCTTAGAGGGGCATGATAGAGCTCGTGTGTTTCTTTTCTTTTTTTTCTTTTTGTTTTTGAGATGGAGTC  3922

Query    9  TCATTCTGTCGCCCAGACTGGAGTGAAGTGGCATGATCTCGGCTCACTGCAACCTCTGCCTCTCGAGGTCAAGC  82
            |..|||||||.|||||.||||||||.|||||||..||||.|||||||||.|||||||||||| |.||.||||||
Sbjct 3923  TTGTTCTGTCACCCAGGCTGGAGTGCAGTGGCACCATCTTGGCTCACTGTAACCTCTGCCTC-CCAGTTCAAGC  3995

Query   83  GATTCTCCTGCCTCGGCCTCCGGAGTAGCTGGGATTACAGGCACACGCAACCATGCCCGGCTAATTTTTTTTGT  156
            .|||||||||||||.||||||..|||||||||||.||||||||....|.||||.|||..|||||   |||||||
Sbjct 3996  AATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCATGAACCACCACGCCTAGCTAA---TTTTTGT  4066

Query  157  ATTTTTAGTAGAGATGGGGTTTCACCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAAG-----------  219
            ||||||||.|||||||||||||.|||||||||||||||||||||||.||||||||||||||||           
Sbjct 4067  ATTTTTAGCAGAGATGGGGTTTTACCATGTTGGCCAGGCTGGTCTCAAACTCCTGACCTCAAGTGATCCACTTG  4140

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 4141  CCTCAGCCTCCCAAAGTGCTGGGATTACAGGCATGAACCACCATGCCTGGAGGAGCCCATGTGTTTCTCATCTC  4214

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 4215  ACCAACCCAAAGCCCAACTCACTCCACAGCTGCTGACCATGAGGAAACCTAAGGTCAACACCGGAGTCAGGCAA  4288

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 4289  ATAAGCCACCCCCCCACCCCCACCCGCATACACACTTGTTTTATTTAAACTGGCCAATCCACAACTGCCAGAGG  4362

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 4363  AAAGCCCGTGGGCCTTCATGGAGGCCTAGTCTCAAGCCCTCACTCTCCCTTCCCACCTGCCGGTCGAGTGCCCT  4436

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 4437  GCTGTCTCTGGACTTCCCATCGGCCCTCAGGGACGTAAGTCTGCCTAGAGGAGAGTTGACACACCAAAAACAAA  4510

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 4511  ACTTCTGTTTCAAAAATCCAGTCCCTGAAGGCAATCGGGAAAAAGTGTGAAGAACAAGGGCAGAGCTTCCCAAC  4584

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 4585  TTTGAGCCTGAGTGGTGAAAGGAAGCAAGAAGAAAAGGGGTTTGTGGGTGCTCGGAGGAGCCCCACAACTATAC  4658

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 4659  CCCCATCCTCTCCAAGATCCACCAGAACAGATACCTACATAAACTAGAGGCATTTGAGAACGAAGGCCTCTTGC  4732

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 4733  CCCCGAGGCAGCAGTAGCAGACTTGTATGGCCCACATGTATTAGTCTGTTCTCACACTATTAAGACATACCTAA  4806

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 4807  GACTGGGTAATTTATAAAGGAAAGAAGTTGAATTGACTCACAGTTCAGAATGGCTTGGGAGGCCTCAGGAAAGT  4880

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 4881  TACATCATGGTGGAAGTGGAAGCAAACAGGTCTTTCTTCACACGGTGGCAGCAAGAAGTGCCAAGCAAAAGGAG  4954

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 4955  GAAAAGCCCCTTATAAAACCATCAGATCTCATGAGAACTCACTATCACGAGAACAGCATGAGGGTAAATGCTCC  5028

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 5029  CATGATTACATTACCTCCCACCAGCTCCTTCCCACCACATGTAGGGATTATAGGAACTATAATTCAATATAAGA  5102

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 5103  TTTGGGGTGGGGACACAGCCAAACCATATCAGAGGATGAGCTAGGGGTGCACAGGGGGAGTAGGCTGTGAAGGA  5176

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 5177  CATGTAGTACCCACATCTCTAGGCCTGCAGGTGCCTTTCCGACAGGAACAAGAGGAACGTGGTAACATTCCAGT  5250

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 5251  GTGGCCTGGCCAGCAGGCACAGCCAGGTAATGTATGGCGCAGCAGGCACCAATGTGGCAGGGGAGGGCCACGTG  5324

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 5325  CTCCTGTGTCTACCCCAACACAAAGGTGCTTCTCCATAACCACTCCTACCCGCCTCCCCCAAAACTGGCTGAGT  5398

Query  220  -----------------------------------------------------------  219
                                                                       
Sbjct 5399  TTAAGTTTCTGCAAACTGGCAAAATGAGGGCTTGAAATAAAAATTGTCTGTGGACTAAA  5457

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