Nucleotide Global Alignment
Description
- Query:
- TRCN0000478282
- Subject:
- NR_156186.2
- Aligned Length:
- 6070
- Identities:
- 192
- Gaps:
- 5855
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GTGACCCTAGTCGGCCGCTGAGAGGCGCGCGGAGTCTGGGCCGCTGCCGTCTAGGGGTCCCGTCCCGAGGCGTC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CCCGGCATCTCCGGCCCGAATCCCGGAGTGCCGGGTCGCGCCTGCACCGAAGGTCCCGGCTCCTGTGCCCTCCC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TGCAGCCGTCAGGGCCCGTCCCCCAACTCCCCTTTCCGCTCAGGCAGGGTCCTCGCGGCCCATGCTGGCCGCTG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GGGACCCGCGCAGCCCAGACCGTTCCCGGGCCGGGCAGCCGGCCACCATGGTGGCCCTGAGGCCTGTGCAGCAA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CTCCAGGGGGGCTAAAGGGCTCAGAGTGCAGGCCGTGGGGCGCGAGGGTCCCGGGCCTGAGCCCCGCGCCATGG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CCGGGGCCATCGCTTCCCGCATGAGCTTCAGCTCTCTCAAGAGGAAGCAACCCAAGACGTTCACCGTGAGGATC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 GTCACCATGGACGCCGAGATGGAGTTCAATTGCGAGTCTTGCTCTGTCACCCTAGCTGGAGTGCAGTGGCGTGA 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 TCTTGGTTTACTGCAACCTCTGCCTCCCAAGTTCAAGCGATTCTCCTGCCTCAGCTTCCCAAGTAGCTGGGACT 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 ACAGATGAAGTGGAAAGGGAAGGACCTCTTTGATTTGGTGTGCCGGACTCTGGGGCTCCGAGAAACCTGGTTCT 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 TTGGACTGCAGTACACAATCAAGGACACAGTGGCCTGGCTCAAAATGGACAAGAAGGTACTGGATCATGATGTT 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 TCAAAGGAAGAACCAGTCACCTTTCACTTCTTGGCCAAATTTTATCCTGAGAATGCTGAAGAGGAGCTGGTTCA 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 GGAGATCACACAACATTTATTCTTCTTACAGGTAAAGAAGCAGATTTTAGATGAAAAGATCTACTGCCCTCCTG 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 AGGCTTCTGTGCTCCTGGCTTCTTACGCCGTCCAGGCCAAGTATGGTGACTACGACCCCAGTGTTCACAAGCGG 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 GGATTTTTGGCCCAAGAGGAATTGCTTCCAAAAAGGGTAATAAATCTGTATCAGATGACTCCGGAAATGTGGGA 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 GGAGAGAATTACTGCTTGGTACGCAGAGCACCGAGGCCGAGCCAGGGATGAAGCTGAAATGGAATATCTGAAGA 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 TAGCTCAGGACCTGGAGATGTACGGTGTGAACTACTTTGCAATCCGGAATAAAAAGGGCACAGAGCTGCTGCTT 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 GGAGTGGATGCCCTGGGGCTTCACATTTATGACCCTGAGAACAGACTGACCCCCAAGATCTCCTTCCCGTGGAA 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 TGAAATCCGAAACATCTCGTACAGTGACAAGGAGTTTACTATTAAACCACTGGATAAGAAAATTGATGTCTTCA 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 AGTTTAACTCCTCAAAGCTTCGTGTTAATAAGCTGATTCTCCAGCTATGTATCGGGAACCATGATCTATTTATG 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 AGGAGAAGGAAAGCCGATTCTTTGGAAGTTCAGCAGATGAAAGCCCAGGCCAGGGAGGAGAAGGCTAGAAAGCA 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 GATGGAGCGGCAGCGCCTCGCTCGAGAGAAGCAGATGAGGGAGGAGGCTGAACGCACGAGGGATGAGTTGGAGA 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 GGAGGCTGCTGCAGATGAAAGAAGAAGCAACAATGGCCAACGAAGCACTGATGCGGTCTGAGGAGACAGCTGAC 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 CTGTTGGCTGAAAAGGCCCAGATCACCGAGGAGGAGGCAAAACTTCTGGCCCAGAAGGCCGCAGAGGCTGAGCA 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 GGAAATGCAGCGCATCAAGGCCACAGCGATTCGCACGGAGGAGGAGAAGCGCCTGATGGAGCAGAAGGTGCTGG 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 AAGCCGAGGTGCTGGCACTGAAGATGGCTGAGGAGTCAGAGAGGAGGGCCAAAGAGGCAGATCAGCTGAAGCAG 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 GACCTGCAGGAAGCACGCGAGGCGGAGCGAAGAGCCAAGCAGAAGCTCCTGGAGATTGCCACCAAGCCCACGTA 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 CCCGCCCATGAACCCAATTCCAGCACCGTTGCCTCCTGACATACCAAGCTTCAACCTCATTGGTGACAGCCTGT 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 CTTTCGACTTCAAAGATACTGACATGAAGCGGCTTTCCATGGAGATAGAGAAAGAAAAAGTGGAATACATGGAA 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 AAGAGCAAGCATCTGCAGGAGCAGCTCAATGAACTCAAGACAGAAATCGAGGCCTTGAAACTGAAAGAGAGGGA 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 GACAGCTCTGGATATTCTGCACAATGAGAACTCCGACAGGGGTGGCAGCAGCAAGCACAATACCATTAAAAAGC 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 TCACCTTGCAGAGCGCCAAGTCCCGAGTGGCCTTCTTTGAAGAGCTCTAGCAGGTGACCCAGCCACCCCAGGAC 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 CTGCCACTTCTCCTGCTACCGGGACCGCGGGATGGACCAGATATCAAGAGAGCCATCCATAGGGAGCTGGCTGG 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 GGGTTTCCGTGGGAGCTCCAGAACTTTCCCCAGCTGAGTGAAGAGCCCAGCCCCTCTTATGTGCAATTGCCTTG 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 AACTACGACCCTGTAGAGATTTCTCTCATGGCGTTCTAGTTCTCTGACCTGAGTCTTTGTTTTAAGAAGTATTT 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 GTCTTCCTTTGTCTAATGTGGGATTCCTGACTCCCTTCGTCCAAGGCACCGGTGTGTGTGTGTCTTGCACTCCA 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 GAGCTGACCTCCACCGCCCAGCCTGGGAAGTCATTGTAGGGAGTGAGACACTGAAGCCCTGAGAAGCCAGTGCC 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 ATCATCCCCACCCCGCCCAGGGTTCCGGAACATTCATTCCCCCACCGGTGAGGACCTGGCATGCAGCGAAGCAG 2738
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2739 CCCAGCCCGGCGGATCCCAGGCCAGCACGCCTGCCGGCTTCTCATCGTCAGGGAGCCCGCCCAGAGCTCGTGAC 2812
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2813 GAGCAAGTGCTGGGTCCCCGCCAGGCACCCCGAGGCGGCGCTCTGGCTGGCAGCTGGTGGGGAATAGGCAGGGC 2886
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2887 AGCTGTGGCTGGGGAGAGACTTTAGGCAGAAGCTGTGATGCAGGCTGACTGCCAGCCGAGGGGCTGGGTAGTGC 2960
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2961 CGTGCGGGAGCTGATGGTACAGGGCACTCGCTGTCCCCCTCCGGCCACCCTAGACCAGGGTCCGAGAGGCAGGC 3034
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3035 AGGAGCCACTCATGTCTTCCCCATTGCCCGACGCCCATAGACGCTCCTTCCTGTGTGGGGCTGGGGTACTCCCT 3108
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3109 GGTCGTACTGCAGTCAGCACCCGTAACCCGGCTATGACCAGGGATCTGTAAGCCCTGTGGCTCCACAGGTGCTG 3182
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3183 CTTCTCACTGGCCCAGACTCTGAGCTCCACCGGCCCAGTCTGCACGGCCCATCTGCTTCACCTTCCCTCCCAGC 3256
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3257 CACGTGCCAGTGGCCACAGCCCACTTCCCAACCCACTGTTGTACCCAGGCCTCACTTTGCTGTTGCCCTTGTCC 3330
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3331 CTCTTCGGGCCCTGAATTTTCTGTTCCCTGGGGGCCAGCCAGGGCCCTTTGTGCCCCTCCCAGCACAGGCCTGA 3404
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3405 TGCAGGTGTCCACTCACAGGTGGCGCTCACCTAGGCTGTCACAGGACCCACCTCCATGCCAGGCAACAGAGGGC 3478
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3479 CACAGAACCACCCCCACGGCTCACTCCTTGGTCTGGGGCCACCTTCTTGCCCTTTCTTTTTTTTTTTTTTTTTT 3552
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3553 TTTTTCCGAGATGGAGTCTCTCTCTGTCACCCAGGTGGGAGTGTGGTGGCACAATCTCGGCTCACTGCAACCTC 3626
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3627 CACCTCCTGAGTTCAAGCAATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCATGCACCACCACAC 3700
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3701 TTGGCCAATGTTCTGTATTTTTAATAGGGACGGGGTTTTGCCATGTTAGCTAGGCTGGTCTCAAACTCACACCT 3774
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3775 GGGATTACAGGCATGAGCCACTGCACCCAGCCCCTTCTTGCCCTTTCTTTTCTCCATGGCTGATGCTGCTGTGG 3848
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3849 CCAGCCAGGGCCCTTGAGATCCTTCCAGTTTGGCTGTTATGCAAAGCAGGTGATTTGTCTTAATCAGATAAAAG 3922
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3923 ATAGAGGCTATGGGGGCCTCAAGATTTTTGGAGAGCAGAGGTGGTCTCTGGCAATTCCATCTGGTTTTGAGAAA 3996
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3997 CTTAGCAGCTCACAGAGCACAGAGATCCTGCCTTCTTCCTACTATCAGGCTGACCTAATGGGGTTGGGCTGCTC 4070
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4071 GGCAACTGCTTGGGTCACCTTGCCCCAAGGAAACCAGCCCTGGGTGCCACCCAGCCACTTAGGGTCTACAGGGT 4144
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4145 GGGACTCCAGACCTAGAGCGTAAGTATGGATGTTGTGGCCCTGTGTCTTCCTAGTGTGACCCAGCCAGGAGCGG 4218
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4219 AAGCTTCAGGCGTTTGTAAAGTGAGGTCTGGCTCTGCCTCCTCCGTTTTTTTTTTTTTTCTGTTTCTGTTTCTG 4292
Query 1 -------------ATGGAGTCTCATTCTGTCGCCCAGACTGGAGTGAAGTGGCATGATCTCGGCTCACTGCAAC 61
||||||||||..||||||||||||.||||||||.||||.||.||||||.||||||||||||
Sbjct 4293 TTTTTTTTTTGAGATGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGTCACGATCTCAGCTCACTGCAAC 4366
Query 62 CTCTGCCTCTCGAGGT-CAAGCGATTCTCCTGCCTCGGCCTCCGGAGTAGCTGGGATTACAGGCACACGCAACC 134
|||.||||| |.|||| ||||.||||||||||||||.||||||.||||||||||||.|||||||....||.|||
Sbjct 4367 CTCCGCCTC-CCAGGTACAAGAGATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGTGTGCCACC 4439
Query 135 ATGCCCGGCTAATTTTTTTTGTATTTTTAGTAGAGATGGGGTTTCACCATGTTGGCCAGGCTGGTCTCGAACTC 208
|||||.|||||| ||||||||||||||||||||||||||||||.|||||||.|||||.||||||||||||||
Sbjct 4440 ATGCCTGGCTAA---TTTTTGTATTTTTAGTAGAGATGGGGTTTCGCCATGTTAGCCAGACTGGTCTCGAACTC 4510
Query 209 CTGACCTCAAG--------------------------------------------------------------- 219
|||||||||.|
Sbjct 4511 CTGACCTCAGGTGATCCTCCCACCCCGGCTTCCCAAAGTTCTGGGATTATAGGCGTGAGCCACCATGCCCGGTC 4584
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4585 TCTTCTCAGTCTTGAAGCCCATCCCTGGATTTCCACCAGGAGTTACTTTCCTCCTGACCTGTAAATTTGTTCTT 4658
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4659 TAACAATGGCTGCAGGTGGGAGCATATGGTGGTTTATAAAAACGCTGTCGGGCTTTGTTTCCTTCTTTAGCTGC 4732
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4733 CGTGTCTACTTCTGAAGTCTGGGAAGTGCCAAGCCACGCGGCCTCAAGGGAGCTGGCTGGTGTTTGAGCTGTGG 4806
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4807 CAGAAGCACCTGGGGCTCCAGGGAGCAGGCTGGGAACTGCAGGACCTTGCTCAGCCAGGAGCACTTCCCCCTCC 4880
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4881 TTGAGGCAGGAATACTGAGGTGCCTCCCCACAGATGGAGAAGGTGGAGAGGAGGATGGGCCTCAGGAGCATCTC 4954
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4955 AAGCCCCAGTAGCAGGAGAAAGAAAGAAAGAGATGCCTGGTTTTCACAGACTGGTTCCTGTGGCTGGGATGACT 5028
Query 220 -------------------------------------------------------------------------- 219
Sbjct 5029 GCATCCTTTTTTTTTTTTTTTTGAGACGGAGTTTTTGCCTTTGTCGCCCAGGCTGGAGTGCAATGGCGTGATCT 5102
Query 220 -------------------------------------------------------------------------- 219
Sbjct 5103 CGGCTCACCGCAACCTCCGCCTCCCGGATTCAAGCAATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGATTACA 5176
Query 220 -------------------------------------------------------------------------- 219
Sbjct 5177 GGCACGCACCTCCACGTCCGGCTAATTTTGTATTTTTAGTGGAGACGGGGTTTCTCCATGTCGGTCAGGCTGGT 5250
Query 220 -------------------------------------------------------------------------- 219
Sbjct 5251 CTCGAACTCCCGACCTCAGGTGATCTGCCCACCTCGGCCTCCCAAAGTGCTGGGATTACAGGCATGAGCCACCG 5324
Query 220 -------------------------------------------------------------------------- 219
Sbjct 5325 CGCTTGGCCAGACTGCGTCCTTTTTAAGCGAACATTTTAGGGCCTGGGAGTTTGTCAAGTAAGGAAGTCTCAAG 5398
Query 220 -------------------------------------------------------------------------- 219
Sbjct 5399 CCCAAAGAGCAGCGTCCTGACCATGGTGGTTTCATTACGAGCCCTTCTGCTGGCTCTCAGGCAGAAGCCCCACA 5472
Query 220 -------------------------------------------------------------------------- 219
Sbjct 5473 GCACCGGGACCATTCATGAGGTCACTGCCCAGCTCATGATGTCCGTGAGGCTGTCCTTTTGGCCAGTAGCCGTG 5546
Query 220 -------------------------------------------------------------------------- 219
Sbjct 5547 TGCAGCTGTGTGGCACAGATGGCTTCGTTCATCCTGATCAAGGCCCCACCTCAGCCACAGCAGTCCCCCCAACC 5620
Query 220 -------------------------------------------------------------------------- 219
Sbjct 5621 TGTGTTGTCCACCCTATTATTCATGTACCTGCCAGGCCCTGCTAGATAGCACCCCGTGGCATTACATAACACTT 5694
Query 220 -------------------------------------------------------------------------- 219
Sbjct 5695 CATGAGTGGCTGTGTCTTGTAATTTTGGGGACAGGTTTCTCTCTTTCCCTCTCTTTTTTTTGTCAAAAGCCCAG 5768
Query 220 -------------------------------------------------------------------------- 219
Sbjct 5769 AGACTGACAACCAGCTGCAGTGTCTAAGTGTTCCTCACTGACAGGGTGGGGCCTCACCACCCCTGGAGGGAGCA 5842
Query 220 -------------------------------------------------------------------------- 219
Sbjct 5843 GCGTTGGCAGGGAGACAGCCTGGCCCAGTGACCCTGGGCCCAAGCCAGCCCCTCCAGGGCTTTCAGGGAAGCGC 5916
Query 220 -------------------------------------------------------------------------- 219
Sbjct 5917 CATCCATTTTCAAAGATGTCAAACGTCACTTCTTCCTGTAGGGCCCGAGTCCTGCCTCCTATCAGGGCCAGATC 5990
Query 220 -------------------------------------------------------------------------- 219
Sbjct 5991 ATAGAAGGCTATTTTCTATTCTGGGGAACGATTATAACTTAAATGATTGTTTTAATAAAAATTCTAAGCTGGAA 6064
Query 220 -- 219
Sbjct 6065 AA 6066
