Nucleotide Global Alignment

Description

Query:
TRCN0000478282
Subject:
XR_001737004.1
Aligned Length:
4040
Identities:
192
Gaps:
3822

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  GCACAGCCTAGAGCCCGCCTCCGTGAAAGACTGCCGGGCGCATGCGGTCGGGGTTGTTCACTGGCTGTCCGGGG  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  CTCCGCGCGCGTCGCCGGCCCAGCTCTGTCGCTGACGGGAGGATCTGAAGCCGGCCGCAGGTCAAAGAGTAAAA  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  TGAAGTACATTCTGGTTACTGGTGGTGTTATATCAGGAATTGGAAAAGGAATCATTGCCAGCAGTGTGGGCACA  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  ATACTCAAGTCATGTGGTTTACATGTAACTTCAATCAAAATTGACCCCTACATTAACATTGATGCAGGAACATT  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  CTCTCCTTATGAGCATGGTGAGGTTTTTGTGCTGGATGATGGTGGGGAAGTAGACCTTGACCTGGGTAACTATG  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  AGCGGTTCCTTGACATCCGCCTCACCAAGGACAATAATCTGACCACTGGAAAGATATACCAGTATGTCATTAAC  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  AAGGAACGGAAAGGAGATTACTTGGGGAAAACTGTCCAAGTTGTCCCTCATATCACAGATGCAATCCAGGAGTG  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  GGTGATGAGACAGGCGTTAATACCTGTAGATGAAGATGGCCTGGAACCTCAAGTGTGTGTTATTGAGCTTGGTG  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  GAACCGTGGGGGACATAGAAAGCATGCCCTTTATTGAGGCCTTCCGTCAGTTCCAATTCAAGGTCAAAAGAGAG  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  AACTTTTGTAACATCCACGTCAGTCTAGTTCCCCAGCCAAGTTCAACAGGGGAACAGAAGACTAAACCTACCCA  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  GAATAGTGTTCGGGAACTTAGAGGACTTGGGCTTTCCCCAGATCTGGTTGTATGCAGGTGCTCAAATCCACTTG  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  ACACATCAGTGAAGGAGAAAATATCAATGTTCTGCCATGTTGAGCCTGAACAAGTGATCTGTGTCCACGATGTC  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  TCATCCATCTACCGAGTCCCCTTGTTGTTAGAGGAGCAAGGGGTTGTAGATTATTTTCTTCGAAGACTTGACCT  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  TCCTATTGAGAGGCAGCCAAGAAAAATGCTGATGAAATGGAAAGAGATGGCTGACAGATATGATCGCTTGCTGG  1036

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1037  AGACCTGCTCTATTGCCCTTGTGGGCAAATACACGAAGTTCTCAGACTCCTATGCCTCTGTCATTAAGGCTCTG  1110

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1111  GAGCATTCTGCACTGGCCATCAACCACAAATTGGAAATCAAGTAGAAACCACTCAGCAATGAAAAGGAAGAAAC  1184

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1185  CAGGCTGAACACTGACTGGCTCAAGCCCATAATCCCAACACTTAGGGAGGCTCTGCTGTGGGAGGATCGCCTAA  1258

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1259  GACCAGTAGTTCGAGAGCAGCCTGGTCAACATAGCGAGACCCCCGTCTCTGCAAAAAAAAGTTAAAAAAGAAAA  1332

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1333  GGAACAAACAACTGATAAACACAGCAACATGGATGAACTTCAAAAACACTAAGCAAAAGAAGCCAGACACAAAA  1406

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1407  GGTTATATACTATTTGGCTCCATTTATATGATGTTCTATAAGAGGCAAAACGAATCTGTGATGATAGAAATTGG  1480

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1481  ATCTGAGGTTGTTTGGGGTAGGAGGTAGAGGGGCACATTCTGGGAAGATGGTAACTTATGTTTTGTTTTGTTTT  1554

Query    1  --------------------------------ATGGAGTCTCATTCTGTCGCCCAGACTGGAGTGAAGTGGCAT  42
                                            ||||||||||..||||||.|||||.||||||||.||||||||
Sbjct 1555  GTTTTGTTTTGTTTTGTTTTGTTTTGTTTGAGATGGAGTCTCGCTCTGTCACCCAGGCTGGAGTGCAGTGGCAT  1628

Query   43  GATCTCGGCTCACTGCAACCTCTGCCTCTCGAGG-TCAAGCGATTCTCCTGCCTCGGCCTCCGGAGTAGCTGGG  115
            ||||.|.|.|||||||||||||||||| ||.||| ||||||..||||||||||||.|||||..|.|||||||||
Sbjct 1629  GATCCCAGTTCACTGCAACCTCTGCCT-TCCAGGTTCAAGCAGTTCTCCTGCCTCAGCCTCTTGGGTAGCTGGG  1701

Query  116  ATTACAGGCACACGCAACCATGCCCGGCTA-------ATTTTTTTTGTATTTTTAGTAGAGATGGGGTTTCACC  182
            |.||||||..||.||.||||..|||.||||       .||||||||||||||||||||||||||||||||||||
Sbjct 1702  ACTACAGGTGCATGCCACCACACCCAGCTATTTTTTTTTTTTTTTTGTATTTTTAGTAGAGATGGGGTTTCACC  1775

Query  183  ATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAAG-------------------------------------  219
            |||||.||||||||.||||||||||||||||||||||                                     
Sbjct 1776  ATGTTTGCCAGGCTAGTCTCGAACTCCTGACCTCAAGTGATCCACCCGCCTCGGCCTTCCAAAGTGCTGGGATT  1849

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1850  ATAGGTGTGAGCCACCACGCCCGGCTCATTCTATATCTTGGTGTGTATGTTTGACAAAACTCTTCAAAGTATGC  1923

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1924  ACTTAAAATGCTTGTATTTTATTGTATGTGAATTATGCTTCAATATGGTAGAAAGAAAAAGAAAAAACCCACAA  1997

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1998  AAGCTGGGCGGAAGATGGGCTGAGGAGGCTGTCATTGAACAGAAAGCCCTCTAGAGTCTGCTGCAGAGGCTTAG  2071

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2072  CTGAGACCCGATCCTGAACACAGTAGAGTGCAGAAAGAGAGAGATTTGGGAATTTAATGATTTTGAAGGAAACT  2145

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2146  GTTGTATTTTAAAACCTCATATTTAAAAAATGTTTAAGTTATTAAATATATTAAGTTGATCACTTTAAAGCCAG  2219

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2220  TATTAAGATGATCACTTTAAAGCCAGAATCAAGAAAGACAACTTTGATAAAATGATAATATTATTTAAAAATTA  2293

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2294  AGAACGCACAGCCTGGGGTCACGAGCCTGCTTTTCTCCCCTGTCTGAATAACATCCAGTACATAGATTCTGCGG  2367

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2368  ACTTGGAGCCCATCACCTCGCAAGAAGAGCCCGTGCGCTACCACGAAGCTTGGCAGAAGCTCTGTAGTGCTCAT  2441

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2442  GGAGTGCTGGTTCCAGGAGGATTTGGTGTTCGAGGAACAGAAGGAAAAATCCAAGCAATTGCCTGGGCTCGGAA  2515

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2516  TCAGAAAAAGCCTTTTTTGGGCGTGTGCTTAGGGATGCAGTTGGCAGTGGTTGAATTCTCAAGAAACGTGCTGG  2589

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2590  GATGGCAAGATGCCAATTCTACAGAGTTTGACCCTACGACCAGTCATCCCGTGGTCGTAGACATGCCAGAACAC  2663

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2664  AACCCAGGGCAGATGGGCGGAACCATGAGGCTGGGCAAGAGGAGAACCCTGTTCCAGACCAAGAACTCAGTCAT  2737

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2738  GAGGAAACTCTATGGAGACGCAGACTACTTGGAAGAGAGGCACCGCCACCGATTTGAGGTGAATCCAGTCTGGA  2811

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2812  AAAAGTGTTTGGAAGAACAAGGCTTGAAGTTTGTTGGCCAAGATGTTGAAGGAGAGAGAATGGAAATTGTGGAG  2885

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2886  TTAGAAGATCATCCCTTTTTTGTTGGGGTTCAGTACCACCCTGAGTTCCTGTCCAGGCCTATCAAGCCCTCCCC  2959

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2960  ACCATACTTTGGCCTCCTCCTGGCCTCTGTGGGGCGGCTCTCACATTACCTCCAGAAAGGCTGCAGGCTCTCAC  3033

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3034  CCAGGGACACCTATAGTGACAGGAGTGGAAGCAGCTCCCCTGACTCTGAAATCACCGAACTGAAGTTTCCATCA  3107

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3108  ATAAATCATGACTGATCTTGTAGCGGATGATTCTTCAAGAGACCCTTCAAACTTGGGTAGAGTTTACAGCTCTG  3181

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3182  ACTTTACACTCGGCTTTGGAGACTTTCTTTAAATTATGTTTTTATTAAGATTATTTTATTATGCGGAAAGGTAT  3255

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3256  TTGGGAAACTTGTCACTTGCATGTCCCATCACGTGTACTGGCTCCTCTGTGGTGTCTGCCTGTTGCGTGACACT  3329

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3330  CTCCTTGCAGTTCTTGAGTTGCGGCAGAACATCGCGATGGGAACCGATGGTGGGTGGGGCTGCAGAGTGCCCCA  3403

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3404  TCGGTCACCTTGTTTCTCAACTACCTCGCATCATTGCAGATGCTAGCGCGTTGCCTGTCGCTTTCCCTTGGATA  3477

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3478  CCTAGACCGTTATAAAGTGTGCCACATGGACTTACCGAGCATGGAGAGAGGATTTTAGCTAGGATTTGAACACT  3551

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3552  TGGTGCTGGGAACCTCAGGGTATTGCTTGCCACTAAGCCATGAAACCAGAGACAAAATCTCTATACTGCCCTGA  3625

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3626  GTTGGGGGGAATTCTCAGTGCCAACTGTGGCTGGTCCTCATTCAAAGGGACGGTCAGTTTGGTGTCAACATGAA  3699

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3700  ACACCAAGATGTCTGTCTCTGAAGCGTGATTTTAAAATCCCCATGCCTGTGGCTGCGCTTCCTATTTCTAGGGC  3773

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3774  TGGGAAACACTCCTTGCATCAAGGGGTCACTTACAGAACAAAGAATCTTTTGGGGGAAACTTCCTCTAAAACCC  3847

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3848  TCTCATATATAGACAGCTTTGACTGGAGGGTCCATTTTTCTTCCAGGATGGTGTTACTGCAGTTGAAAGGGCAA  3921

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3922  TATGAAGTTACTTTCTTAATGTGACCTAGCAATAGGCATAGCTACGTGGCACTATATTCTGGCCAGACTCGATG  3995

Query  220  --------------------------------------------  219
                                                        
Sbjct 3996  TGTACTCTAACTTAAGAAATAAATCAGTAAGGCAGAACAAGAGA  4039

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