Nucleotide Global Alignment
Description
- Query:
- TRCN0000478282
- Subject:
- XR_001737004.1
- Aligned Length:
- 4040
- Identities:
- 192
- Gaps:
- 3822
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GCACAGCCTAGAGCCCGCCTCCGTGAAAGACTGCCGGGCGCATGCGGTCGGGGTTGTTCACTGGCTGTCCGGGG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CTCCGCGCGCGTCGCCGGCCCAGCTCTGTCGCTGACGGGAGGATCTGAAGCCGGCCGCAGGTCAAAGAGTAAAA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TGAAGTACATTCTGGTTACTGGTGGTGTTATATCAGGAATTGGAAAAGGAATCATTGCCAGCAGTGTGGGCACA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 ATACTCAAGTCATGTGGTTTACATGTAACTTCAATCAAAATTGACCCCTACATTAACATTGATGCAGGAACATT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CTCTCCTTATGAGCATGGTGAGGTTTTTGTGCTGGATGATGGTGGGGAAGTAGACCTTGACCTGGGTAACTATG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 AGCGGTTCCTTGACATCCGCCTCACCAAGGACAATAATCTGACCACTGGAAAGATATACCAGTATGTCATTAAC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 AAGGAACGGAAAGGAGATTACTTGGGGAAAACTGTCCAAGTTGTCCCTCATATCACAGATGCAATCCAGGAGTG 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GGTGATGAGACAGGCGTTAATACCTGTAGATGAAGATGGCCTGGAACCTCAAGTGTGTGTTATTGAGCTTGGTG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 GAACCGTGGGGGACATAGAAAGCATGCCCTTTATTGAGGCCTTCCGTCAGTTCCAATTCAAGGTCAAAAGAGAG 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 AACTTTTGTAACATCCACGTCAGTCTAGTTCCCCAGCCAAGTTCAACAGGGGAACAGAAGACTAAACCTACCCA 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 GAATAGTGTTCGGGAACTTAGAGGACTTGGGCTTTCCCCAGATCTGGTTGTATGCAGGTGCTCAAATCCACTTG 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 ACACATCAGTGAAGGAGAAAATATCAATGTTCTGCCATGTTGAGCCTGAACAAGTGATCTGTGTCCACGATGTC 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 TCATCCATCTACCGAGTCCCCTTGTTGTTAGAGGAGCAAGGGGTTGTAGATTATTTTCTTCGAAGACTTGACCT 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 TCCTATTGAGAGGCAGCCAAGAAAAATGCTGATGAAATGGAAAGAGATGGCTGACAGATATGATCGCTTGCTGG 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 AGACCTGCTCTATTGCCCTTGTGGGCAAATACACGAAGTTCTCAGACTCCTATGCCTCTGTCATTAAGGCTCTG 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 GAGCATTCTGCACTGGCCATCAACCACAAATTGGAAATCAAGTAGAAACCACTCAGCAATGAAAAGGAAGAAAC 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 CAGGCTGAACACTGACTGGCTCAAGCCCATAATCCCAACACTTAGGGAGGCTCTGCTGTGGGAGGATCGCCTAA 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 GACCAGTAGTTCGAGAGCAGCCTGGTCAACATAGCGAGACCCCCGTCTCTGCAAAAAAAAGTTAAAAAAGAAAA 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 GGAACAAACAACTGATAAACACAGCAACATGGATGAACTTCAAAAACACTAAGCAAAAGAAGCCAGACACAAAA 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 GGTTATATACTATTTGGCTCCATTTATATGATGTTCTATAAGAGGCAAAACGAATCTGTGATGATAGAAATTGG 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 ATCTGAGGTTGTTTGGGGTAGGAGGTAGAGGGGCACATTCTGGGAAGATGGTAACTTATGTTTTGTTTTGTTTT 1554
Query 1 --------------------------------ATGGAGTCTCATTCTGTCGCCCAGACTGGAGTGAAGTGGCAT 42
||||||||||..||||||.|||||.||||||||.||||||||
Sbjct 1555 GTTTTGTTTTGTTTTGTTTTGTTTTGTTTGAGATGGAGTCTCGCTCTGTCACCCAGGCTGGAGTGCAGTGGCAT 1628
Query 43 GATCTCGGCTCACTGCAACCTCTGCCTCTCGAGG-TCAAGCGATTCTCCTGCCTCGGCCTCCGGAGTAGCTGGG 115
||||.|.|.|||||||||||||||||| ||.||| ||||||..||||||||||||.|||||..|.|||||||||
Sbjct 1629 GATCCCAGTTCACTGCAACCTCTGCCT-TCCAGGTTCAAGCAGTTCTCCTGCCTCAGCCTCTTGGGTAGCTGGG 1701
Query 116 ATTACAGGCACACGCAACCATGCCCGGCTA-------ATTTTTTTTGTATTTTTAGTAGAGATGGGGTTTCACC 182
|.||||||..||.||.||||..|||.|||| .||||||||||||||||||||||||||||||||||||
Sbjct 1702 ACTACAGGTGCATGCCACCACACCCAGCTATTTTTTTTTTTTTTTTGTATTTTTAGTAGAGATGGGGTTTCACC 1775
Query 183 ATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAAG------------------------------------- 219
|||||.||||||||.||||||||||||||||||||||
Sbjct 1776 ATGTTTGCCAGGCTAGTCTCGAACTCCTGACCTCAAGTGATCCACCCGCCTCGGCCTTCCAAAGTGCTGGGATT 1849
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1850 ATAGGTGTGAGCCACCACGCCCGGCTCATTCTATATCTTGGTGTGTATGTTTGACAAAACTCTTCAAAGTATGC 1923
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1924 ACTTAAAATGCTTGTATTTTATTGTATGTGAATTATGCTTCAATATGGTAGAAAGAAAAAGAAAAAACCCACAA 1997
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1998 AAGCTGGGCGGAAGATGGGCTGAGGAGGCTGTCATTGAACAGAAAGCCCTCTAGAGTCTGCTGCAGAGGCTTAG 2071
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2072 CTGAGACCCGATCCTGAACACAGTAGAGTGCAGAAAGAGAGAGATTTGGGAATTTAATGATTTTGAAGGAAACT 2145
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2146 GTTGTATTTTAAAACCTCATATTTAAAAAATGTTTAAGTTATTAAATATATTAAGTTGATCACTTTAAAGCCAG 2219
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2220 TATTAAGATGATCACTTTAAAGCCAGAATCAAGAAAGACAACTTTGATAAAATGATAATATTATTTAAAAATTA 2293
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2294 AGAACGCACAGCCTGGGGTCACGAGCCTGCTTTTCTCCCCTGTCTGAATAACATCCAGTACATAGATTCTGCGG 2367
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2368 ACTTGGAGCCCATCACCTCGCAAGAAGAGCCCGTGCGCTACCACGAAGCTTGGCAGAAGCTCTGTAGTGCTCAT 2441
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2442 GGAGTGCTGGTTCCAGGAGGATTTGGTGTTCGAGGAACAGAAGGAAAAATCCAAGCAATTGCCTGGGCTCGGAA 2515
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2516 TCAGAAAAAGCCTTTTTTGGGCGTGTGCTTAGGGATGCAGTTGGCAGTGGTTGAATTCTCAAGAAACGTGCTGG 2589
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2590 GATGGCAAGATGCCAATTCTACAGAGTTTGACCCTACGACCAGTCATCCCGTGGTCGTAGACATGCCAGAACAC 2663
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2664 AACCCAGGGCAGATGGGCGGAACCATGAGGCTGGGCAAGAGGAGAACCCTGTTCCAGACCAAGAACTCAGTCAT 2737
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2738 GAGGAAACTCTATGGAGACGCAGACTACTTGGAAGAGAGGCACCGCCACCGATTTGAGGTGAATCCAGTCTGGA 2811
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2812 AAAAGTGTTTGGAAGAACAAGGCTTGAAGTTTGTTGGCCAAGATGTTGAAGGAGAGAGAATGGAAATTGTGGAG 2885
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2886 TTAGAAGATCATCCCTTTTTTGTTGGGGTTCAGTACCACCCTGAGTTCCTGTCCAGGCCTATCAAGCCCTCCCC 2959
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2960 ACCATACTTTGGCCTCCTCCTGGCCTCTGTGGGGCGGCTCTCACATTACCTCCAGAAAGGCTGCAGGCTCTCAC 3033
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3034 CCAGGGACACCTATAGTGACAGGAGTGGAAGCAGCTCCCCTGACTCTGAAATCACCGAACTGAAGTTTCCATCA 3107
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3108 ATAAATCATGACTGATCTTGTAGCGGATGATTCTTCAAGAGACCCTTCAAACTTGGGTAGAGTTTACAGCTCTG 3181
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3182 ACTTTACACTCGGCTTTGGAGACTTTCTTTAAATTATGTTTTTATTAAGATTATTTTATTATGCGGAAAGGTAT 3255
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3256 TTGGGAAACTTGTCACTTGCATGTCCCATCACGTGTACTGGCTCCTCTGTGGTGTCTGCCTGTTGCGTGACACT 3329
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3330 CTCCTTGCAGTTCTTGAGTTGCGGCAGAACATCGCGATGGGAACCGATGGTGGGTGGGGCTGCAGAGTGCCCCA 3403
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3404 TCGGTCACCTTGTTTCTCAACTACCTCGCATCATTGCAGATGCTAGCGCGTTGCCTGTCGCTTTCCCTTGGATA 3477
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3478 CCTAGACCGTTATAAAGTGTGCCACATGGACTTACCGAGCATGGAGAGAGGATTTTAGCTAGGATTTGAACACT 3551
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3552 TGGTGCTGGGAACCTCAGGGTATTGCTTGCCACTAAGCCATGAAACCAGAGACAAAATCTCTATACTGCCCTGA 3625
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3626 GTTGGGGGGAATTCTCAGTGCCAACTGTGGCTGGTCCTCATTCAAAGGGACGGTCAGTTTGGTGTCAACATGAA 3699
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3700 ACACCAAGATGTCTGTCTCTGAAGCGTGATTTTAAAATCCCCATGCCTGTGGCTGCGCTTCCTATTTCTAGGGC 3773
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3774 TGGGAAACACTCCTTGCATCAAGGGGTCACTTACAGAACAAAGAATCTTTTGGGGGAAACTTCCTCTAAAACCC 3847
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3848 TCTCATATATAGACAGCTTTGACTGGAGGGTCCATTTTTCTTCCAGGATGGTGTTACTGCAGTTGAAAGGGCAA 3921
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3922 TATGAAGTTACTTTCTTAATGTGACCTAGCAATAGGCATAGCTACGTGGCACTATATTCTGGCCAGACTCGATG 3995
Query 220 -------------------------------------------- 219
Sbjct 3996 TGTACTCTAACTTAAGAAATAAATCAGTAAGGCAGAACAAGAGA 4039
