Nucleotide Global Alignment

Description

Query:
TRCN0000478282
Subject:
XR_001738697.1
Aligned Length:
3885
Identities:
189
Gaps:
3669

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  GCCGCGCAGGCGCTGTGGTGGGCTCCGGTGCACTGTGGGATGGAAACCGGAGCGGCGCGTCCTGGCAGGACCGG  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  GCGGCGGCGGCGGCGGGGCCGGCGGCGGCCAGGGACCCGGGCTTAGGCTCGGCCAGGCCGGCTGAGGGGCGCGG  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  GCGGCCAGCGGGCGGCGGACGCCGTCATGAACGCGGCGGTGGTGAGGCGGACGCAGGAGGCGCTGGGGAAAGTG  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  ATTCGGAGGCCGCCGCTGACCGAGAAGCTGCTGAGCAAGCCCCCGTTCCGCTACCTGCACGACATCATCACGGA  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  GGTGATTAGAATGACTGGTTTCATGAAGGGCCTCTACACAGACGCCGAGATGAAGTCTGATAATGTGAAGGATA  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  AAGATGCAAAAATTAGCTTCCTACAAAAGGCCATAGACGTGGTTGTAATGGTGTCGGGAGAGCCACTGTTGGCC  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  AAACCAGCCCGAATCGTGGCGGGGCATGAGCCTGAAAGAACAAACGAGCTGCTCCAGATAATTGGAAAATGCTG  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  TCTCAACAAGCTCTCTAGTGACGATGCGGTGCGGAGGGTTTTAGCTGGAGAGAAGGGAGAAGTGAAAGGCCGGG  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  CCTCACTGACCTCAAGATCTCAGGAATTGGATAATAAGAATGTGCGAGAAGAAGAGTCCAGAGTTCACAAAAAT  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  ACAGAGGATAGAGGAGACGCTGAAATAAAAGAGAGAAGTACAAGCAGAGATCGAAAACAGAAGGAAGAATTGAA  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  AGAAGACCGCAAGCCAAGAGAAAAGGACAAGGACAAGGAGAAGGCCAAGGAGAATGGCGGAAACAGACACAGAG  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  AAGGGGAGAGAGAGAGAGCCAAAGCCCGGGCCAGGCCAGACAACGAGCGACAGAAAGACAGAGGCAACAGGGAG  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  CGGGACAGAGACTCCGAGCGCAAGAAGGAGACAGAGAGAAAGAGTGAGGGGGGGAAAGAGAAGGAGAGACTGAG  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  AGACAGGGACCGAGAGCGCGACCGGGACAAAGGGAAGGACAGGGACAGACGGAGAGTGAAAAACGGGGAGCACT  1036

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1037  CCTGGGACCTGGACAGGGAGAAGAACAGAGAGCATGACAAACCTGAGAAAAAGGTGACTCCACCAGTGATGCAG  1110

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1111  GAGATGCTGGACCTGCTGGCCAAGATAAGTCTGAGGTGCCAGAGACTCCAGAAATTCCTAATGAGCTTTCATCC  1184

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1185  AACATCAGAAGAATTCCTCGGCCTGGGAGTGCAAGACCAGCCCCTCCCCGGGTCAAACGGCAAGACAGCATGGA  1258

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1259  GGCGCTACAAATGGATAGGTCAGGGAGTGGTAAAACCGTTTCAAATGTGATTACAGAGTCACACAATTCTGACA  1332

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1333  ATGAAGAGGATGATCAATTTGTGGTGGAAGCTGCCCCTCAGCTCTCTGAAATGTCAGAAATTGAAATGGTAACA  1406

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1407  GCAGTGGAACTAGAAGAAGAGGAGAAGCATGGTGGACTTGTGAAAAAAATTTTGGAGACGAAGAAAGATTATGA  1480

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1481  GAAATTGCAGCAGTCACCCAAACCTGGGGAGAAGGAGCGATCTCTCTTTGAGTCGGCATGGAAGAAGGAGAAGG  1554

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1555  ACATCGTTTCCAAGGAGATAGAGAAGCTCCGCACGTCCATCCAGACCCTGTGCAAGAGCGCACTTCCCCTGGGG  1628

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1629  AAGATCATGGACTACATCCAGGAAGACGTGGATGCCATGCAGAATGAGCTGCAGATGTGGCACAGCGAGAACAG  1702

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1703  GCAGCACGCCGAGGCCCTGCAGCAGGAGCAGAGGATCACAGACTGTGCCGTGGAGCCCTTAAAGGCTGAGCTCG  1776

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1777  CGGAGCTGGAGCAGCTGATCAAAGACCAGCAAGACAAGATCTGTGCTGTGAAGGCCAACATCCTCAAGAATGAA  1850

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1851  GAAAAAATCCAGAAAATGGTATATAGTATCAATTTGACTTCGAGAAGGTGAACACTCAAAAGTTTCAGAGATGA  1924

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1925  AAAGTCACCTCAGTTTAAAAGCAAAAAGGAAGATAGAAAATCATTACTCTTTTAAGTTCCAGTTTGCTAAGAAA  1998

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1999  ATGAACAGTTTACAATGTTATTATCCAGCTAATTTTCAGAGCTTTAAAACTGTAAGCATGTTAAGTGTATTAAA  2072

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2073  AAAACCATGTTTTCTTACCTCCTTCCAGATGGAATACTGGCTAGTTATAAATAGCGCTTCCAAACACCTCTGTG  2146

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2147  AAAAGTTTTTTTGAAAGCCTGTTCTTTGTGTTTCTGCTGTAACCTGTTTAGTTCTGTACCAGAACTCTCTAGCA  2220

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2221  GGTAAGTGGTGTGGGCATACCAAGGGAACAGTAGTCCTTTATTTTGGTTTAGTGGAAAGACTTTCAGAGGTCAG  2294

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2295  TGCCGAATGAAGGATGACTGTGTACTTTTTGATAGGCACTTGATAAGTAGAATGAGGCCTGAAAATGAATACAT  2368

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2369  TATATTTTTAGTTAATTTCCAATGGAAAGGGCTAACCTCAGCCTGTCTCCATATCAGGTACCTATCAACTGGAT  2442

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2443  TGTTTTCATTTTTGTTTTTTGACCTCTTTGTAATTGCATGTACTTCTCTATGTAATTTTCCTCTTGATCTCTAC  2516

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2517  TATCGTTTGCTTGTGTTTCTAGTCCTTAAAGTTCATAAATTTAAAAAGGAGATTTCAGGATGGCCTTTATGGAC  2590

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2591  GTTGTCTGGACATACATCCTCACTTTCTTCCGCAGTTTACCCTGGTTTTCCTCAGACAGAGGCTAGCGCAGCCC  2664

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2665  CCCGGAGTCCTTGTTCTCCTTAAGAGGGTCTCGCTCTGCAAAGCATTGGCGCCATGGCTTTTCCTTTGCATGGG  2738

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2739  TGTGCATACCGAGAGACAGGCAGCTTAGGAAAAACAACATAAGGAAGACTTAAAAGGATGCACTGATTTACGAC  2812

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2813  GTTTTTTGATGTTAGCCATTTTTTTGGAAATTGTTTTTTAAAGCAAAAGTTTTTTAAAAACATGGTTTATAGTT  2886

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2887  TTTCACTTACATATACTATTGTAAATACTTAGCAGAGTCTTAAGTTACTGTATAAAACATTTCATTGTGTTTGA  2960

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2961  AGACATACTTATGGGTCTTGAGGTCTGGGTCCTAATACTTTTAAATAGTGTATTTATTATGTAAACTGAGGAGT  3034

Query    1  ----------------------------------------------------------------ATGGAGTCTC  10
                                                                            |||||||||.
Sbjct 3035  GCCATTTAAAGTGTGAGGATTGCCTGAAAAGGTTTTGTTTCTTTCTTTTTTTTTTTTTTTTGAGATGGAGTCTT  3108

Query   11  ATTCTGTCGCCCAGACTGGAGTGAAGTGGCATGATCTCGGCTCACTGCAACCTCTGCCTCTCGAGGTCAAGCGA  84
            |.||||||||||||.||||||||.||||||...|||||||||||||||||||.|.|||||.||||.|||||.||
Sbjct 3109  ACTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCAATCTCGGCTCACTGCAACCACCGCCTCCCGAGTTCAAGTGA  3182

Query   85  TTCTCCTGCCTCGGCCTCCGGAGTAGCTGGGATTACAGGCACACGCAACCATGCCCGGCTAATTTTTTTTGTAT  158
            ||||||||||||.||||||.|||||.||||||.|||||||.|||||.|||||||||.|||||   |||||||||
Sbjct 3183  TTCTCCTGCCTCAGCCTCCTGAGTAACTGGGACTACAGGCGCACGCCACCATGCCCAGCTAA---TTTTTGTAT  3253

Query  159  TTTTAGTAGAGATGGGGTTTCACCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAAG-------------  219
            |||.||||||||||||||||||||.|||||.|||||.|||||||.|.|||||||||||..|             
Sbjct 3254  TTTCAGTAGAGATGGGGTTTCACCGTGTTGACCAGGATGGTCTCCACCTCCTGACCTCGTGATCCGCCTGCCTC  3327

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3328  GGCCTCCCAAAGTGCTGGGATTACAGGCATGAGCCACTGCACCCGGCCAGGTTTTGTTTCTTTAAGGATTAGCA  3401

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3402  CAAATGGCACCGTTGGGTTTTTCTTCATACAATTTCCAAAATAAATTCTGTACTCAGGTTGTTATATGATTTTC  3475

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3476  TGAGCTGAATAAGTTCAGGAGCAGATTATTAAGATCTGCCATTCTGAAACGCTGGTCTTTTTCTCCTTCCTATA  3549

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3550  GTGCACCATAAAATTCTGTTTGATCAGATTATATTACATACATTTTGGGGGAGTGGAGGGACATGAGTTAAGTA  3623

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3624  GCCCTTCATGTATTTATAATCTCTTTTCTACTGAATCAAATGACTTAGCCATGACCCTGAATGGACCTTGTTTT  3697

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3698  ACTTCAAGTTGAGATGTCTGCCTTTTATGAATTTGTATATGTGAATAGAGTTTGGGGGTTGCCAAAAATTGCAT  3771

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3772  ACATTGTATGTAAGTAAAATTTTTTATGAAGTAGTCTGTCAAATTGTATCATAAAGTTTATTTTTCTTTTATAC  3845

Query  220  -------------------------------------  219
                                                 
Sbjct 3846  GTAAATCATTAAAAATAATCACATATTTTTTCCATAA  3882

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