Nucleotide Global Alignment
Description
- Query:
- TRCN0000478282
- Subject:
- XR_001738697.1
- Aligned Length:
- 3885
- Identities:
- 189
- Gaps:
- 3669
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GCCGCGCAGGCGCTGTGGTGGGCTCCGGTGCACTGTGGGATGGAAACCGGAGCGGCGCGTCCTGGCAGGACCGG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GCGGCGGCGGCGGCGGGGCCGGCGGCGGCCAGGGACCCGGGCTTAGGCTCGGCCAGGCCGGCTGAGGGGCGCGG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GCGGCCAGCGGGCGGCGGACGCCGTCATGAACGCGGCGGTGGTGAGGCGGACGCAGGAGGCGCTGGGGAAAGTG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 ATTCGGAGGCCGCCGCTGACCGAGAAGCTGCTGAGCAAGCCCCCGTTCCGCTACCTGCACGACATCATCACGGA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GGTGATTAGAATGACTGGTTTCATGAAGGGCCTCTACACAGACGCCGAGATGAAGTCTGATAATGTGAAGGATA 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 AAGATGCAAAAATTAGCTTCCTACAAAAGGCCATAGACGTGGTTGTAATGGTGTCGGGAGAGCCACTGTTGGCC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 AAACCAGCCCGAATCGTGGCGGGGCATGAGCCTGAAAGAACAAACGAGCTGCTCCAGATAATTGGAAAATGCTG 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 TCTCAACAAGCTCTCTAGTGACGATGCGGTGCGGAGGGTTTTAGCTGGAGAGAAGGGAGAAGTGAAAGGCCGGG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 CCTCACTGACCTCAAGATCTCAGGAATTGGATAATAAGAATGTGCGAGAAGAAGAGTCCAGAGTTCACAAAAAT 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 ACAGAGGATAGAGGAGACGCTGAAATAAAAGAGAGAAGTACAAGCAGAGATCGAAAACAGAAGGAAGAATTGAA 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 AGAAGACCGCAAGCCAAGAGAAAAGGACAAGGACAAGGAGAAGGCCAAGGAGAATGGCGGAAACAGACACAGAG 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 AAGGGGAGAGAGAGAGAGCCAAAGCCCGGGCCAGGCCAGACAACGAGCGACAGAAAGACAGAGGCAACAGGGAG 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 CGGGACAGAGACTCCGAGCGCAAGAAGGAGACAGAGAGAAAGAGTGAGGGGGGGAAAGAGAAGGAGAGACTGAG 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 AGACAGGGACCGAGAGCGCGACCGGGACAAAGGGAAGGACAGGGACAGACGGAGAGTGAAAAACGGGGAGCACT 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 CCTGGGACCTGGACAGGGAGAAGAACAGAGAGCATGACAAACCTGAGAAAAAGGTGACTCCACCAGTGATGCAG 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 GAGATGCTGGACCTGCTGGCCAAGATAAGTCTGAGGTGCCAGAGACTCCAGAAATTCCTAATGAGCTTTCATCC 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 AACATCAGAAGAATTCCTCGGCCTGGGAGTGCAAGACCAGCCCCTCCCCGGGTCAAACGGCAAGACAGCATGGA 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 GGCGCTACAAATGGATAGGTCAGGGAGTGGTAAAACCGTTTCAAATGTGATTACAGAGTCACACAATTCTGACA 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 ATGAAGAGGATGATCAATTTGTGGTGGAAGCTGCCCCTCAGCTCTCTGAAATGTCAGAAATTGAAATGGTAACA 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 GCAGTGGAACTAGAAGAAGAGGAGAAGCATGGTGGACTTGTGAAAAAAATTTTGGAGACGAAGAAAGATTATGA 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 GAAATTGCAGCAGTCACCCAAACCTGGGGAGAAGGAGCGATCTCTCTTTGAGTCGGCATGGAAGAAGGAGAAGG 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 ACATCGTTTCCAAGGAGATAGAGAAGCTCCGCACGTCCATCCAGACCCTGTGCAAGAGCGCACTTCCCCTGGGG 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 AAGATCATGGACTACATCCAGGAAGACGTGGATGCCATGCAGAATGAGCTGCAGATGTGGCACAGCGAGAACAG 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 GCAGCACGCCGAGGCCCTGCAGCAGGAGCAGAGGATCACAGACTGTGCCGTGGAGCCCTTAAAGGCTGAGCTCG 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 CGGAGCTGGAGCAGCTGATCAAAGACCAGCAAGACAAGATCTGTGCTGTGAAGGCCAACATCCTCAAGAATGAA 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 GAAAAAATCCAGAAAATGGTATATAGTATCAATTTGACTTCGAGAAGGTGAACACTCAAAAGTTTCAGAGATGA 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 AAAGTCACCTCAGTTTAAAAGCAAAAAGGAAGATAGAAAATCATTACTCTTTTAAGTTCCAGTTTGCTAAGAAA 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 ATGAACAGTTTACAATGTTATTATCCAGCTAATTTTCAGAGCTTTAAAACTGTAAGCATGTTAAGTGTATTAAA 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 AAAACCATGTTTTCTTACCTCCTTCCAGATGGAATACTGGCTAGTTATAAATAGCGCTTCCAAACACCTCTGTG 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 AAAAGTTTTTTTGAAAGCCTGTTCTTTGTGTTTCTGCTGTAACCTGTTTAGTTCTGTACCAGAACTCTCTAGCA 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 GGTAAGTGGTGTGGGCATACCAAGGGAACAGTAGTCCTTTATTTTGGTTTAGTGGAAAGACTTTCAGAGGTCAG 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 TGCCGAATGAAGGATGACTGTGTACTTTTTGATAGGCACTTGATAAGTAGAATGAGGCCTGAAAATGAATACAT 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 TATATTTTTAGTTAATTTCCAATGGAAAGGGCTAACCTCAGCCTGTCTCCATATCAGGTACCTATCAACTGGAT 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 TGTTTTCATTTTTGTTTTTTGACCTCTTTGTAATTGCATGTACTTCTCTATGTAATTTTCCTCTTGATCTCTAC 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 TATCGTTTGCTTGTGTTTCTAGTCCTTAAAGTTCATAAATTTAAAAAGGAGATTTCAGGATGGCCTTTATGGAC 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 GTTGTCTGGACATACATCCTCACTTTCTTCCGCAGTTTACCCTGGTTTTCCTCAGACAGAGGCTAGCGCAGCCC 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 CCCGGAGTCCTTGTTCTCCTTAAGAGGGTCTCGCTCTGCAAAGCATTGGCGCCATGGCTTTTCCTTTGCATGGG 2738
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2739 TGTGCATACCGAGAGACAGGCAGCTTAGGAAAAACAACATAAGGAAGACTTAAAAGGATGCACTGATTTACGAC 2812
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2813 GTTTTTTGATGTTAGCCATTTTTTTGGAAATTGTTTTTTAAAGCAAAAGTTTTTTAAAAACATGGTTTATAGTT 2886
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2887 TTTCACTTACATATACTATTGTAAATACTTAGCAGAGTCTTAAGTTACTGTATAAAACATTTCATTGTGTTTGA 2960
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2961 AGACATACTTATGGGTCTTGAGGTCTGGGTCCTAATACTTTTAAATAGTGTATTTATTATGTAAACTGAGGAGT 3034
Query 1 ----------------------------------------------------------------ATGGAGTCTC 10
|||||||||.
Sbjct 3035 GCCATTTAAAGTGTGAGGATTGCCTGAAAAGGTTTTGTTTCTTTCTTTTTTTTTTTTTTTTGAGATGGAGTCTT 3108
Query 11 ATTCTGTCGCCCAGACTGGAGTGAAGTGGCATGATCTCGGCTCACTGCAACCTCTGCCTCTCGAGGTCAAGCGA 84
|.||||||||||||.||||||||.||||||...|||||||||||||||||||.|.|||||.||||.|||||.||
Sbjct 3109 ACTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCAATCTCGGCTCACTGCAACCACCGCCTCCCGAGTTCAAGTGA 3182
Query 85 TTCTCCTGCCTCGGCCTCCGGAGTAGCTGGGATTACAGGCACACGCAACCATGCCCGGCTAATTTTTTTTGTAT 158
||||||||||||.||||||.|||||.||||||.|||||||.|||||.|||||||||.||||| |||||||||
Sbjct 3183 TTCTCCTGCCTCAGCCTCCTGAGTAACTGGGACTACAGGCGCACGCCACCATGCCCAGCTAA---TTTTTGTAT 3253
Query 159 TTTTAGTAGAGATGGGGTTTCACCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAAG------------- 219
|||.||||||||||||||||||||.|||||.|||||.|||||||.|.|||||||||||..|
Sbjct 3254 TTTCAGTAGAGATGGGGTTTCACCGTGTTGACCAGGATGGTCTCCACCTCCTGACCTCGTGATCCGCCTGCCTC 3327
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3328 GGCCTCCCAAAGTGCTGGGATTACAGGCATGAGCCACTGCACCCGGCCAGGTTTTGTTTCTTTAAGGATTAGCA 3401
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3402 CAAATGGCACCGTTGGGTTTTTCTTCATACAATTTCCAAAATAAATTCTGTACTCAGGTTGTTATATGATTTTC 3475
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3476 TGAGCTGAATAAGTTCAGGAGCAGATTATTAAGATCTGCCATTCTGAAACGCTGGTCTTTTTCTCCTTCCTATA 3549
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3550 GTGCACCATAAAATTCTGTTTGATCAGATTATATTACATACATTTTGGGGGAGTGGAGGGACATGAGTTAAGTA 3623
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3624 GCCCTTCATGTATTTATAATCTCTTTTCTACTGAATCAAATGACTTAGCCATGACCCTGAATGGACCTTGTTTT 3697
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3698 ACTTCAAGTTGAGATGTCTGCCTTTTATGAATTTGTATATGTGAATAGAGTTTGGGGGTTGCCAAAAATTGCAT 3771
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3772 ACATTGTATGTAAGTAAAATTTTTTATGAAGTAGTCTGTCAAATTGTATCATAAAGTTTATTTTTCTTTTATAC 3845
Query 220 ------------------------------------- 219
Sbjct 3846 GTAAATCATTAAAAATAATCACATATTTTTTCCATAA 3882
