Nucleotide Global Alignment

Description

Query:
TRCN0000478282
Subject:
XR_001740291.1
Aligned Length:
2229
Identities:
188
Gaps:
2016

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  AAGAAAGGTAAGGGCCCTGGGCGAGGAAAGCGCGGCCCTTTCCGAGTTTGGTGTTTTGCAGCGAAAGGAAATCT  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  CGCTCTTCCGAAAGTCCTCCAGGGCGAGAGAGGAAAGGGCCTAGGTACTGTGCTGGGGTCGCACAGCCGGCCGA  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  GACAGTGCCGGGACGGGGAGCCAGGCTTCCGAGTGCGCCCGGTCACTGACTCCTCCGCGCTTTCCTCGTGCGCC  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  TGCAGCCCTTGGTTCTTGGAAACGCCGGCGCCTTGTTCAGGGCTGGTGGGGCTGGGGCGCAAGGTGCAGCTGAC  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  AATGCCCGAGAGGAGCCGCAGCCTCTGGTGGAGTTCGGTCGGGTGTGGGGGTAGTCAAGGAAAGAAGCAAAGGG  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  AATACCTCCTCTGAAAAATGGCAGAAGCAGTTTTCCATGCCCCAAAGAGGAAAAGAAGAGTGTATGAGACTTAC  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  GAGTCTCCATTGCCAATCCCTTTTGGTCAGGACCATGGTCCTCTGAAAGAATTCAAGATATTCCGTGCTGAAAT  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  GATTAACAACAATGTGATTGTGAGGAATGCGGAGGACATTGAGCAGCTCTATGGGAAAGGTTATTTTGGAAAAG  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  GTATTCTTTCAAGAAGCCGTCCAAGCTTCACAATTTCAGATCCTAAACTGGTTGCTAAATGGAAAGATATGAAG  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  ACAAACATGCCTATCATCACATCAAAGAGGTATCAGCATAGTGTTGAGTGGGCAGCAGAGCTGATGCGTAGACA  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  GGGGCAGGATGAGAGTACAGTGCGCAGAATCCTCAAGGATTACACGAAACCGCTTGAGCATCCTCCTGTGAAAA  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  GGAATGAAGAGGCTCAAGTGCATGACAAGCTTAACTCTGGAATGGTTTCCAACATGGAAGGCACAGCAGGGGGA  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  GAGAGACCTTCTGTGGTAAACGGGGACTCTGGAAAGTCAGGTGGTGTGGGTGATCCCCGTGAGCCATTAGGCTG  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  CCTGCAGGAGGGCTCTGGCTGCCACCCAACAACAGAGAGCTTTGAGAAAAGCGTGCGAGAGGATGCCTCACCTC  1036

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1037  TGCCCCATGTCTGTTGCTGCAAACAAGATGCTCTCATCCTCCAGCGTGGCCTTCATCATGAAGACGGCAGCCAG  1110

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1111  CACATCGGCCTCCTGCATCCTGGGGACAGAGGGCCTGACCATGAGTACGTGCTGGTCGAGGAAGCGGAGTGTGC  1184

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1185  CATGAGCGAGAGGGAGGCTGCCCCAAATGAGGAAGCCTTTTTCTTGGTCTATGCTCTGGGATGTTTAAGTATTT  1258

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1259  ACTATGAGAAGGAGCCTTTAACGATAGTGAAGCTCTGGAAAGCTTTCACTGTAGTTCAGCCCACGTTCAGAACC  1332

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1333  ACCTACATGGCCTACCATTACTTTCGAAGCAAGGGCTGGGTGCCCAAAGTGGGACTCAAGTACGGGACAGATTT  1406

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1407  ACTGCTATATCGGAAAGGCCCTCCATTTTACCATGCAAGTTATTCTGTCATTATCGAGCTAGTTGATGACCATT  1480

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1481  TTGAAGGCTCTCTCCGCAGGCCTCTCAGTTGGAAGTCCCTGGCTGCCTTGAGCAGAGTTTCCGTTAATGTCTCT  1554

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1555  AAGGAACTTATGCTGTGCTATTTGATTAAACCCTCTACTATGACTGACAAGGAAATGGAGTCACCAGAATGTAT  1628

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1629  GAAAAGGATTAAAGTTCAGGAGGTGATTCTGAGTCGATGGGTTTCTTCACGAGAGAGGAGTGACCAAGACGATC  1702

Query    1  -------------------------------------------------ATGG--AGTCTCATTCTGTCGCCCA  23
                                                             |.||  ||||||..|||||||.|||
Sbjct 1703  TTTAACAATTCAACCTCAAATTTCTAATTTCACCAACAACTATTTATTGAGGGCTAGTCTCGCTCTGTCGTCCA  1776

Query   24  GACTGGAGTGAAGTG--GCATGATCTCGGCTCACTGCAACCTCTGCCT-CTCGAGGTCAAGCGATTCTCCTGCC  94
            |.|||||||..|.||  ||  |||||.||.|||||||||||||||||| || |.|.|.|||||||||||.||||
Sbjct 1777  GGCTGGAGTCCAATGCTGC--GATCTTGGATCACTGCAACCTCTGCCTGCT-GGGTTTAAGCGATTCTCATGCC  1847

Query   95  TCGGCCTCCGGAGTAGCTGGGATTACAGGCACACGCAACCATGCCCGGCTAATTTTTTTTGTATTTTTAGTAGA  168
            ||.||||||.||||||||||||||||||||||.|.|.||||..|.|||||||   |||||||||||||||||||
Sbjct 1848  TCAGCCTCCTGAGTAGCTGGGATTACAGGCACGCACCACCACACACGGCTAA---TTTTTGTATTTTTAGTAGA  1918

Query  169  GATGGGGTTTCACCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAAG-----------------------  219
            ||.||||||||||.|||||||||||||||||||.|||||||||||||||||                       
Sbjct 1919  GACGGGGTTTCACTATGTTGGCCAGGCTGGTCTGGAACTCCTGACCTCAAGTGATCTGCCCGCCTTGGCCTCCC  1992

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1993  AAAGTGCTGAGAGTACAGGCGTGAGCCACTGCATCCAGCTCTTAGCATGTGCTTTTAAAGTAAAAACCACGAGG  2066

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2067  AGAAGGTACTCATTACTTCATAACTTGTGTCTCACCCACCTTGCTGTCTTCACATCCCCACTTTCTGTATGCAC  2140

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2141  ATTGGAAGGTGAATTTGTTCAGCTCACATTAATTTATAGGAATAATTTTCATTGCTCTGTGAATAAAATGTGCT  2214

Query  220  ---------  219
                     
Sbjct 2215  ACCACTTTA  2223