Nucleotide Global Alignment

Description

Query:
TRCN0000478282
Subject:
XR_001741752.1
Aligned Length:
4250
Identities:
190
Gaps:
4034

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  GTGGGTGGAAGCTGTATCTCCTTTGCTACAACCTTGCTACCTAGAGCTATTTTTTGATAAAAGCAAGCTTTGAA  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  TCAAATTTTGCCTCAGGTACAAGGATCTATTGTTCCGCAAGCACAAAAACAATTATATAGCCAGTTCATATAAG  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  CACAGTGAAGTCCTCATTCTCTCTCCTTTCAGGTTTCTGAGCAAGATGCTTGCATGAAAGATTCAATCTAAGGC  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  CAATGCAAAAATATTGTGAAAGCAGCAGGATCAGCTAGCCTTCCAGTTGGCTTCTTAAATGCTGCATTGAAAGG  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  ATGAAACAGAACGGATGTGAACAAGAGTTCCCTGAGAAAGGACAGCTCTTAGAGAGATAGGATAATTACTGGAC  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  TCAAGAAGATACCAAATCATGGTGTGCATTTCTGCGTTGTGTTTGGAAGAGGAACTAGGATTGTTATGAAAAGG  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  AAGGATGTGTTCAACTTAGAAGAATTAAACCTCAACCATCTGTCTCTTCCAAATGGCATTCTTGATTCTAAAAA  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  TCTTAAGTAGAGTGTAAAGTTATTGTTGGATACTGTAGTAGCCAGGCTAAGCTGAGCTATTCAGTGGAACAGAT  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  AAACCCGAAAATCTCAGTGGCTTAACACAACAAGATTTATTTCTTTTTAGTATCACAATCTGATGTAGATTGGG  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  TTGGTCTCCTGCTTGGCTTTCCATCAAGTGACAGCTCAGGGATCCAAGTTGCTTTTATTTGGAAACTGTCATCT  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  TGAGAGCATTTTGTTTCCAGCTGTATGGACAGGAGATCCAGAAGGTGTGGAGAAGTGCATCCTTCCTGGATCAC  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  AAATGATACATCACTTTAGCTCACATTCCATTGTTAAGAATTAGTGACATGATCCCACTGGGATTCATGGGGTC  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  TGGGATATGGAACACTTGGATATTTGGCGAGCATGAACAATCTTTGCCATAGAAACATTGCCTCTATAATGTTA  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  TTCTATATCCCTTATCTTCTCATGGTAGATTTCACATAGGATTAGTATCAGGAAAACGTTTTTCTCTCCTAAAA  1036

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1037  TGTTGGTATTCTTCTTTTTTCCCTCTGGAGTCAGGAACTTTAGATTTAATATTAATGACTATCTAATCTGAGAT  1110

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1111  TTTTAGTAGCATCATGTATCCTATTTCTCTATTGTGTTTCTGGAATAGTTTTATTATTGTATTTTAACTGACTA  1184

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1185  ACTGTATTTGATTTTTTAAAAATTGCCATAATCCTTTCTAGTTTTAGCTGTTCATTTAATGAACACTTACCAAT  1258

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1259  AGCAGATGTGTTGATAAGGATGAAGGATGTTTTTGGCTGCAACAGAAAAACTAATAAGTGGTTTAAGCAATAAG  1332

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1333  AGTTTAATTATCTGACACAAGAAGTCTGGCAGTTTCAGGATAGGTTAATTCAATGGTGTGATATCATAGAGGAT  1406

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1407  CATGTATACTCACTTTTTCTGTTTTATAAACTTCAGCGTTTGATGGTGTTCCCCCTTCCTGTCACATACAGGTT  1480

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1481  AGTAGTTCCAAGTGTTGCTTGTCATGGTAGACCCTAGTCAGGCCTGGGTCTTGTGACGCAGGAGACAAATATGC  1554

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1555  TCATAGACTTGTCGTTATGACATGGCTGCAGTGTGGTGCCACCAGGCCTGCATCACGCCTACTCATCATATAAT  1628

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1629  ATTAGATTATATAGTCTGTGGAAAATGTTGCAAAATGATACTGGTGGCAGGGTCAGAAATTGTATTCAGACTTT  1702

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1703  GATGTTAGATCCAGGCAAATGGCTTGTTGAAAAGAGATTTCTCTTTAGAGAGAAATCATGTTGGTGTACCAGGT  1776

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1777  GACATGTTTGGTTGGGGGTGGGGTGGGGGGACTGCTTGGATAGCATGGTAGTGATAGAAGTGTGATAAGCTGGA  1850

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1851  TGCTGGATATAGTTAGAAGGATTTACTGATCAATTGGATGTGAGGAGTGATATAGAGAGAGATGTTGGGAATGA  1924

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1925  CTCCAAGTTTTGGCCTGAGTGATGGGAAAAATTGAGTTGCTATTTATCAAGATAGGGAAGACCAATGAGTTTGG  1998

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1999  TGCTGTCATAAAATAAAATGTATCAGATTTTTAGCAACAACTGGAAGTAAGACATTGCAAGGAGTCTGGGCTGG  2072

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2073  GCTGAGATAGAGTTCAGATGGGGAGCTGGAATCAGACTGCTGCCCCAGGTCCTGGGACCCTGCCATGCAGAAAA  2146

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2147  GACACCTGGCATGGGCAAGGACTCCAGTATGCCGGAGCCTCTTCCTCCTTTCTCAGGCCAAATTTGTGTCCTTG  2220

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2221  CAAAATTTGGCTACAAATGTTAAATTTACAAAGACCTCTGATACCCATTATCCCACCCAACTCTCTGGAGAGCC  2294

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2295  TTTGTAATGTGGTAACTGCTCTTATGCACATAGCCAAAGACTTGAAAACAGTCTCAGAAAAGCTGTAATTTCTA  2368

Query    1  ------------------------------------------------------------------AT------  2
                                                                              ||      
Sbjct 2369  CCTTCATTCATTTAAAGAAAACTTACTAAACACTTATTTATTTATTTTTATTTTATTTATTTATTTATTTTTGA  2442

Query    3  GG---AGTCTCATTCTGTCGCCCAGACTGGAGTGAAGTGGCATGATCTCGGCTCACTGCAACCTCTGCCTCTCG  73
            ||   |||||||.|.|||.||||||.||||.|||||||||||.|||||||||||||||||||||||||||||||
Sbjct 2443  GGCACAGTCTCAGTTTGTTGCCCAGGCTGGGGTGAAGTGGCACGATCTCGGCTCACTGCAACCTCTGCCTCTCG  2516

Query   74  AGGTCAAGCGATTCTCCTGCCTCGGCCTCCGGAGTAGCTGGGATTACAGGCACACGCAACCATGCCCGGCTAAT  147
            .|.||||||||||||||||||||.||||||..|||||||||||.|||||.||..|.|.||||..||||.|.|| 
Sbjct 2517  GGTTCAAGCGATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGTCATGCACCACCACCCCCGACAAA-  2589

Query  148  TTTTTTTGTATTTTTAGTAGAGATGGGGTTTCACCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAAG--  219
              ||||||||.||||.||.||||..|||||||||||||||||||||||||||||||||||||||||||||||  
Sbjct 2590  --TTTTTGTACTTTTGGTGGAGACAGGGTTTCACCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAAGGG  2661

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2662  ACCTGACTGCCTCTGCCTCCCAAAGTGCTGGGATTACAGGCATGAGCCACTGTGCCTGGTCCCAAACATCTATT  2735

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2736  AGGTACTTGCTGTATGTGGTGAAATAAACCCCAGCTCTCCTGATTCAAGGTTAGTGTTCTTTTCACAAATCTAC  2809

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2810  TTCAATACATCAAATCCTACTTCTCTTTCTTTCTATATTTAACTCATAAATATTCCTCTTCTGTCATTTGTGGT  2883

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2884  TTTGAAATGTCTGCAAACTCATGGATACTATTCACTTCTAATGAATAGAATAAAGCAGAAGTGATGGAATATAA  2957

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2958  CTTCAGAGGCCATTTCATGAAAGCCACTGTGGCTTCCTACTTGTTCTCTTGCTCTCTCTCTTAGAACACTTGCT  3031

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3032  CTGGGGAAAGCCAGCTGCCATATTGTGAGCAGACCTATGAAAAGGCCCACTTGGTGAAGAACTGAGGCCTCTGG  3105

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3106  CTGATGGACACATGGGTGACCTTGCAATCAAGTCTTCTGGCTTCAACCAAGCCTTCAGCTGAGACTGCAGCCTC  3179

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3180  ATGAAAGATCCTGAGCTAGAAGCATCCTGCCATCCTAATAAGCCACTCTTGAATTTCTGACCCTTAAAAATTGT  3253

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3254  GAGATAAGCACCTGTGCTTTTTTTAAGTGTTAGATTTAAAAAACCCTGAAAAAATAAAGAAGAAAAAAGACAAC  3327

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3328  TCATAATCTCACCACATTAAAAAGAATAGCTATAGAAAAATTCCAGTAGTATAAAAAGGAAAAATGGAAATAAC  3401

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3402  TTCCCACCATCCCTGATCTTTAGTTCTTTTTCCCACAGTGACATTTTCTTTCCCAAGAAATGTTCATGCATATG  3475

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3476  CAATATATGTGTAAACCCTTTAAGATGTTCACAAAAGGATCATGTTACACTCATTCGAAAAACTTAATATTATA  3549

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3550  TCTTGAAGGTGTCTTCATATCAGTATATATATATCTATCTTAGTTTGTTAATAGATTTCCCATAATTTAAATGT  3623

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3624  ACCATATTTCTTTTACCAGTCCCCATATATGGACATTTAGGATATTTCCAGTATTCTTTTCTGTTATAAAAATA  3697

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3698  TGGTGATAAACATTTTCATGCTTTTTTGAGTATCTTCAAGTAAAGTCCTATGGGTAGCATTCTGGCATCACGTT  3771

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3772  GTATATGCATTTAAAGTTGATGCTATTCACTTGTTCCACAATCTTTGCTCCGAGTTTACACTGATGAAGCATGA  3845

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3846  GAATGCTATATCCCCACAAACCTGTGCATATTGTTGATAGTAAGCATTGTTTGCTATTTTCTGACTATTCATTT  3919

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3920  TTCTTCTTTTGAGAATTGCCATGCCTAGAAGAGTGCCTGTCTTGTAATATATAAGATAATAACTTGATAGCTAG  3993

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3994  CATTTCTGAGGCTTCTTGTGCCTTTAACGTATATTTACTGTTTTGATACTTACAAAGACCCTATGAAGTACGTA  4067

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 4068  CTATTATTATCTGCTTATGGCTGGTGGGAAAACTGAGCTGTACAGAATTTAAACAAACTGTCCCAGGTCACACA  4141

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 4142  ACTAGGAAGGGTGGAGCCAGGATGCAAATGATACGGAATTTTAAAAAATGGGTAGTTGAGTGAATGAATAAATG  4215

Query  220  --------------------------------  219
                                            
Sbjct 4216  GATGACCTGTTTACATCCTTTCTCATTTTTAA  4247

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