Nucleotide Global Alignment

Description

Query:
TRCN0000478282
Subject:
XR_001741754.1
Aligned Length:
4084
Identities:
190
Gaps:
3868

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  GTTCCGGACCACCTCGCAGCGCCGCGTCCTTAGGGGCGGGCTCGGGGGGCACCACCCTCGAGGGGCGGAACCCG  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  TGGGGGCGGTGGCGTGGATCCGGAGGTACCTGCTTCTTAAATGCTGCATTGAAAGGATGAAACAGAACGGATGT  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  GAACAAGAGTTCCCTGAGAAAGGACAGCTCTTAGAGAGATAGGATAATTACTGGACTCAAGAAGATACCAAATC  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  ATGGTGTGCATTTCTGCGTTGTGTTTGGAAGAGGAACTAGGATTGTTATGAAAAGGAAGGATGTGTTCAACTTA  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  GAAGAATTAAACCTCAACCATCTGTCTCTTCCAAATGGCATTCTTGATTCTAAAAATCTTAAGTAGAGTGTAAA  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  GTTATTGTTGGATACTGTAGTAGCCAGGCTAAGCTGAGCTATTCAGTGGAACAGATAAACCCGAAAATCTCAGT  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  GGCTTAACACAACAAGATTTATTTCTTTTTAGTATCACAATCTGATGTAGATTGGGTTGGTCTCCTGCTTGGCT  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  TTCCATCAAGTGACAGCTCAGGGATCCAAGTTGCTTTTATTTGGAAACTGTCATCTTGAGAGCATTTTGTTTCC  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  AGCTGTATGGACAGGAGATCCAGAAGGTGTGGAGAAGTGCATCCTTCCTGGATCACAAATGATACATCACTTTA  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  GCTCACATTCCATTGTTAAGAATTAGTGACATGATCCCACTGGGATTCATGGGGTCTGGGATATGGAACACTTG  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  GATATTTGGCGAGCATGAACAATCTTTGCCATAGAAACATTGCCTCTATAATGTTATTCTATATCCCTTATCTT  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  CTCATGGTAGATTTCACATAGGATTAGTATCAGGAAAACGTTTTTCTCTCCTAAAATGTTGGTATTCTTCTTTT  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  TTCCCTCTGGAGTCAGGAACTTTAGATTTAATATTAATGACTATCTAATCTGAGATTTTTAGTAGCATCATGTA  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  TCCTATTTCTCTATTGTGTTTCTGGAATAGTTTTATTATTGTATTTTAACTGACTAACTGTATTTGATTTTTTA  1036

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1037  AAAATTGCCATAATCCTTTCTAGTTTTAGCTGTTCATTTAATGAACACTTACCAATAGCAGATGTGTTGATAAG  1110

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1111  GATGAAGGATGTTTTTGGCTGCAACAGAAAAACTAATAAGTGGTTTAAGCAATAAGAGTTTAATTATCTGACAC  1184

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1185  AAGAAGTCTGGCAGTTTCAGGATAGGTTAATTCAATGGTGTGATATCATAGAGGATCATGTATACTCACTTTTT  1258

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1259  CTGTTTTATAAACTTCAGCGTTTGATGGTGTTCCCCCTTCCTGTCACATACAGGTTAGTAGTTCCAAGTGTTGC  1332

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1333  TTGTCATGGTAGACCCTAGTCAGGCCTGGGTCTTGTGACGCAGGAGACAAATATGCTCATAGACTTGTCGTTAT  1406

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1407  GACATGGCTGCAGTGTGGTGCCACCAGGCCTGCATCACGCCTACTCATCATATAATATTAGATTATATAGTCTG  1480

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1481  TGGAAAATGTTGCAAAATGATACTGGTGGCAGGGTCAGAAATTGTATTCAGACTTTGATGTTAGATCCAGGCAA  1554

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1555  ATGGCTTGTTGAAAAGAGATTTCTCTTTAGAGAGAAATCATGTTGGTGTACCAGGTGACATGTTTGGTTGGGGG  1628

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1629  TGGGGTGGGGGGACTGCTTGGATAGCATGGTAGTGATAGAAGTGTGATAAGCTGGATGCTGGATATAGTTAGAA  1702

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1703  GGATTTACTGATCAATTGGATGTGAGGAGTGATATAGAGAGAGATGTTGGGAATGACTCCAAGTTTTGGCCTGA  1776

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1777  GTGATGGGAAAAATTGAGTTGCTATTTATCAAGATAGGGAAGACCAATGAGTTTGGTGCTGTCATAAAATAAAA  1850

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1851  TGTATCAGATTTTTAGCAACAACTGGAAGTAAGACATTGCAAGGAGTCTGGGCTGGGCTGAGATAGAGTTCAGA  1924

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1925  TGGGGAGCTGGAATCAGACTGCTGCCCCAGGTCCTGGGACCCTGCCATGCAGAAAAGACACCTGGCATGGGCAA  1998

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1999  GGACTCCAGTATGCCGGAGCCTCTTCCTCCTTTCTCAGGCCAAATTTGTGTCCTTGCAAAATTTGGCTACAAAT  2072

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2073  GTTAAATTTACAAAGACCTCTGATACCCATTATCCCACCCAACTCTCTGGAGAGCCTTTGTAATGTGGTAACTG  2146

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2147  CTCTTATGCACATAGCCAAAGACTTGAAAACAGTCTCAGAAAAGCTGTAATTTCTACCTTCATTCATTTAAAGA  2220

Query    1  ------------------------------------------------AT------GG---AGTCTCATTCTGT  17
                                                            ||      ||   |||||||.|.|||
Sbjct 2221  AAACTTACTAAACACTTATTTATTTATTTTTATTTTATTTATTTATTTATTTTTGAGGCACAGTCTCAGTTTGT  2294

Query   18  CGCCCAGACTGGAGTGAAGTGGCATGATCTCGGCTCACTGCAACCTCTGCCTCTCGAGGTCAAGCGATTCTCCT  91
            .||||||.||||.|||||||||||.|||||||||||||||||||||||||||||||.|.|||||||||||||||
Sbjct 2295  TGCCCAGGCTGGGGTGAAGTGGCACGATCTCGGCTCACTGCAACCTCTGCCTCTCGGGTTCAAGCGATTCTCCT  2368

Query   92  GCCTCGGCCTCCGGAGTAGCTGGGATTACAGGCACACGCAACCATGCCCGGCTAATTTTTTTTGTATTTTTAGT  165
            |||||.||||||..|||||||||||.|||||.||..|.|.||||..||||.|.||   ||||||||.||||.||
Sbjct 2369  GCCTCAGCCTCCCAAGTAGCTGGGACTACAGTCATGCACCACCACCCCCGACAAA---TTTTTGTACTTTTGGT  2439

Query  166  AGAGATGGGGTTTCACCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAAG--------------------  219
            .||||..|||||||||||||||||||||||||||||||||||||||||||||||                    
Sbjct 2440  GGAGACAGGGTTTCACCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAAGGGACCTGACTGCCTCTGCCT  2513

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2514  CCCAAAGTGCTGGGATTACAGGCATGAGCCACTGTGCCTGGTCCCAAACATCTATTAGGTACTTGCTGTATGTG  2587

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2588  GTGAAATAAACCCCAGCTCTCCTGATTCAAGGTTAGTGTTCTTTTCACAAATCTACTTCAATACATCAAATCCT  2661

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2662  ACTTCTCTTTCTTTCTATATTTAACTCATAAATATTCCTCTTCTGTCATTTGTGGTTTTGAAATGTCTGCAAAC  2735

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2736  TCATGGATACTATTCACTTCTAATGAATAGAATAAAGCAGAAGTGATGGAATATAACTTCAGAGGCCATTTCAT  2809

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2810  GAAAGCCACTGTGGCTTCCTACTTGTTCTCTTGCTCTCTCTCTTAGAACACTTGCTCTGGGGAAAGCCAGCTGC  2883

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2884  CATATTGTGAGCAGACCTATGAAAAGGCCCACTTGGTGAAGAACTGAGGCCTCTGGCTGATGGACACATGGGTG  2957

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2958  ACCTTGCAATCAAGTCTTCTGGCTTCAACCAAGCCTTCAGCTGAGACTGCAGCCTCATGAAAGATCCTGAGCTA  3031

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3032  GAAGCATCCTGCCATCCTAATAAGCCACTCTTGAATTTCTGACCCTTAAAAATTGTGAGATAAGCACCTGTGCT  3105

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3106  TTTTTTAAGTGTTAGATTTAAAAAACCCTGAAAAAATAAAGAAGAAAAAAGACAACTCATAATCTCACCACATT  3179

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3180  AAAAAGAATAGCTATAGAAAAATTCCAGTAGTATAAAAAGGAAAAATGGAAATAACTTCCCACCATCCCTGATC  3253

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3254  TTTAGTTCTTTTTCCCACAGTGACATTTTCTTTCCCAAGAAATGTTCATGCATATGCAATATATGTGTAAACCC  3327

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3328  TTTAAGATGTTCACAAAAGGATCATGTTACACTCATTCGAAAAACTTAATATTATATCTTGAAGGTGTCTTCAT  3401

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3402  ATCAGTATATATATATCTATCTTAGTTTGTTAATAGATTTCCCATAATTTAAATGTACCATATTTCTTTTACCA  3475

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3476  GTCCCCATATATGGACATTTAGGATATTTCCAGTATTCTTTTCTGTTATAAAAATATGGTGATAAACATTTTCA  3549

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3550  TGCTTTTTTGAGTATCTTCAAGTAAAGTCCTATGGGTAGCATTCTGGCATCACGTTGTATATGCATTTAAAGTT  3623

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3624  GATGCTATTCACTTGTTCCACAATCTTTGCTCCGAGTTTACACTGATGAAGCATGAGAATGCTATATCCCCACA  3697

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3698  AACCTGTGCATATTGTTGATAGTAAGCATTGTTTGCTATTTTCTGACTATTCATTTTTCTTCTTTTGAGAATTG  3771

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3772  CCATGCCTAGAAGAGTGCCTGTCTTGTAATATATAAGATAATAACTTGATAGCTAGCATTTCTGAGGCTTCTTG  3845

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3846  TGCCTTTAACGTATATTTACTGTTTTGATACTTACAAAGACCCTATGAAGTACGTACTATTATTATCTGCTTAT  3919

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3920  GGCTGGTGGGAAAACTGAGCTGTACAGAATTTAAACAAACTGTCCCAGGTCACACAACTAGGAAGGGTGGAGCC  3993

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3994  AGGATGCAAATGATACGGAATTTTAAAAAATGGGTAGTTGAGTGAATGAATAAATGGATGACCTGTTTACATCC  4067

Query  220  --------------  219
                          
Sbjct 4068  TTTCTCATTTTTAA  4081

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