Nucleotide Global Alignment
Description
- Query:
- TRCN0000478282
- Subject:
- XR_001743167.1
- Aligned Length:
- 4601
- Identities:
- 187
- Gaps:
- 4393
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GCCCTGGGAGCTGTGTGGCCGCGTGCGCGCTCCGCCGGGGTCCTGGAGGCCTCTGGGCGCGTGCGCGGGCGGTC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GCTACCTGCGGCCGAGCCAGGGAGCGAGAGGGCGCAGAGGGCAGCGGGCTTGGGCAGCATGAGGCCCGGAGGGG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 AGCGGCCCGTGGAAGGGGGCGCGTGCAATGGCCGCTCCGAGCTGGAGCTACTGAAGCTGCGCTCGGCGGAGTGC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 ATCGACGAGGCGGCCGAGCGGCTGGGGGCCCTGAGCCGCGCGATCTGGAGCCAGCCCGAGCTGGCCTACGAGGA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GCACCATGCCCACCGCGTGCTGACGCACTTCTTCGAGCGGGAGCCGCCCGCGGCCTCCTGGGCAGTGCAGCCGC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 ACTACCAGCTGCCCACGGCCTTCCGCGCCGAGTGGGAGCCGCCGGAGGCCCGGGCACCGAGCGCCACGCCACGC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CCGCTGCACCTGGGCTTCCTCTGCGAGTACGACGCGCTGCCCGGCATCGGCCACGCCTGCGGCCACAACCTCAT 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CGCTGAGGTCGGGGCGGCGGCCGCGCTGGGCGTGAGGGGGGCCTTAGAGGGCCTCCCCAGGCCGCCTCCGCCCG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 TGAAGGTAGTTGTCCTGGGAACCCCTGCAGAAGAAGATGGTGGTGGCAAAATTGATTTAATTGAAGCAGGGGCT 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 TTTACAAATCTTGATGTTGTTTTTATGGCCCACCCATCACAAGAGAATGCTGCTTATCTACCAGATATGGCTGA 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 ACATGATGTGACTGTGAAATACTATGGAAAAGCATCTCATTCTGCTTCTTATCCCTGGGAAGGATTAAATGCAT 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 TAGATGCTGCTGTGCTGGCCTATAACAATCTGTCTGTGTTCAGACAGCAAATGAAACCAACCTGGAGAGTTCAT 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 GGTGGAAATTAAAGGTGGAGCACATGATTATTACAATGTTCTTCCCAATAAGAGCCTATGGAAAGCCTATATGG 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 AAAATGGAAGAAAGCTAGGAATAGAGTTCATTTCAGAAGATACAATGTTGAATGGCCCTTCAGGATCTACGGAT 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 TTTGGAAATGTTAGTTTTGTGGTTCCTGGAATTCATCCATATTTTCACATTGGATCTAATGCCTTGAATCATAC 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 TGAACAGTACACTGAAGCTGCTGGGTCACAGGAAGCTCAGTTCTACACTCTGCGGACGGCCAAAGCTCTGGCAA 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 TGACGGCACTGGATGTTATTTTTAAACCAGAGTTACTGGAAGGAATCAGAGAGGACTTTAAACTGAAACTTCAA 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 GAAGAACAGTTTGTAAATGCAGTAGAATAAAAGACTTAGGGGCCACTTATAAATCAAGAAGACGTGATGATTTT 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 TTTCTTTTAATCTCTTTTAATGAAGGCATGCTTGTTTTTTAATCTTAAAGGAGTAAAATTCTTTTTACCTGATA 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 AGTGAGGACAGGGTGTGGAGAAAACATATTAATTACCTCATATCTAAAGTGAAAATTTTTGCAAATCCGTACTT 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 GATAGGATTATGATATTACAGGAGCTGGTATGTGATGCCATTCTTTCTTTTTTTTTACCCCGCAACCACTCACC 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 TTCACAGTAGTGATACCATTTCTTAACCTGGAGGATACATGGCATCATTTTTATAAAATATGTTAGTAAACCTT 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 TTTGTAAGCCTTAAATGTTATGTGTATTTTTAAAAGCTTAAGAGATTTCAAACCTTATATTCAGAATTGACACC 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 CATGAGAGTGTTTTGTGGTATAGGGTGGTAAACTTGTTCTCTAATCGTATATTAATTCCTCTACCAGATTGTAT 1776
Query 1 ------------------------------------ATGGAGTCTCATTCTGTCGCCCAGACTGGAGTGAAGTG 38
||.|||.|||..|||||.||||||.|||.||||.||||
Sbjct 1777 ATTTGAAGCCAGTGTCTTTCCTTTTTTTGTTTTAAGATAGAGCCTCGCTCTGTTGCCCAGGCTGAAGTGTAGTG 1850
Query 39 GCATGATCTCGGCTCACTGCAACCTCTGCCTCTCGAGG-TCAAGCGATTCTCCTGCCTCGGCCTCCGGAGTAGC 111
|||..||||||||||||||||||||||||||| |.||| |||||.||||||||||||||.||||.|..||||||
Sbjct 1851 GCACAATCTCGGCTCACTGCAACCTCTGCCTC-CCAGGTTCAAGTGATTCTCCTGCCTCAGCCTACCAAGTAGC 1923
Query 112 TGGGATTACA-------GGCACACGCAACCATGCCCGGCTAATTTTTTTTGTATTTTTAGTAGAGATGGGGTTT 178
|||||||||| ||| |||||||||.||||| |||||||||||||||||||||.||..|||
Sbjct 1924 TGGGATTACAGGTGTGTGGC-------ACCATGCCCAGCTAA---TTTTTGTATTTTTAGTAGAGACGGCATTT 1987
Query 179 CACCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAAG--------------------------------- 219
|||||||||||||||||||||||||||||||||||||||.|
Sbjct 1988 CACCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAGGTGATGCACCTGCCTCGGCCTCCTAAAGTGCTGG 2061
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2062 GATTACAGGCATGAGCCACCGCACCCGGCCTGCCAGTGTCTTTTTAATACACATGTGTGTTGGTATTTTTAAAT 2135
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2136 TGTTACAGTATCTAGCATATTGCTTACTCTGAATATTCAGTACTTTTTGAATAAGCAAATATTGCTTCCTTGCT 2209
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2210 TGGAATCATCAGAGTTTAAAGTAGCTTCGTGGATGGACCATGATCCTAAGATGAGTTTTAATTTTGTGTTTACA 2283
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2284 GTCATCTCTTGTACAACGTGGAGAAGAAAAGATATACTTACTACTTTGCTTCAGGTACACATAAGAAAACCTCT 2357
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2358 TTTTTAAAAAAATTTTTATTTTTTTACATAATAGAGACAGGGGCTCGCTGTAGCTTCCAGGCTGGCCTCAAACT 2431
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2432 CCTGGGCTCAAGCAATCCTCCTGTCTTGGCCTCCCAAAGTGTTGGGATTTCAGGTATGAGACACCACACCTGCC 2505
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2506 CATTTTTGTTTGGTTTTTTAATGGGCAGGTTCTTGCTCTCCCAGGCTGGAGTGCAGTGGTGTAATCACAGCTCA 2579
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2580 CTGCAGTCTCGAACTCCTGGACTCAAGCAGTCCTCCCACCTCAGCCTCCTAAAGCACTGGGATTACAGGCTTGA 2653
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2654 GGCACTGCACCTGGCCCTGACCATTTTTTAAAAAGGTTAGGCTTAGTGCAAAGTTTAAAATTATATGATTCTTA 2727
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2728 AAATACTGAATTAGTTTCTAAACTAAACTAGAGGTATAGGTGGACCTGCTTGAGGTATCTTTGTTTTTATGGAA 2801
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2802 CATTTTTATTACATGCCTTTATAATTTTTCATTGTTCACACCCTGTACTGAAACCTTTTTCTCAAATACCAACT 2875
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2876 CTTGGCTATGTTAAATTTGTAGACTTTAAAAGATGTTATCTAAATTAATGGTTTAAATATACAAATTGAAAATA 2949
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2950 TTTTCTTTTTAGTGGCAATTTTAAAAGCAGGCCTTAATATGGGACCTGCTTTTAAAGTAAAATATGTGGTACTA 3023
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3024 TGAATTACTAAATTGCTATATACCATGTAATAGTGAGTATAGCTAATATTTAGTATGCCTTTTAAAAATTTTGG 3097
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3098 ACTGCTTTTCGGTTTTAACAAATTCTCCACATGTGAACTACTCAAGAAATTTTCCCTTTTTAATTGCCTCTATA 3171
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3172 GCACTCATAAGAGCTAGGGCATTAGGATAAACTAGAATATTTTATGTTTATGAATACTTGTATAAACTTAAAAG 3245
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3246 TGTTTTGATTTCCCACAATTTCCCAAAGGAATGTTTATTTATTAAGAGTTGTGTTGATAATTTAACTGTTACAA 3319
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3320 TTTCAGCAGTTGAATTCAGTGAACACTGGTTGAGGAGTGCCTATTTCTAAGCACTGGGTGTAAGAAGAAAAGAC 3393
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3394 ACTTGCAAAGGAAGAGCTAAGATTAACATAATTTCTTTGGTTTTTCTATTGCTTGTTATTATTATGTAAAAACT 3467
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3468 GGGTGGCAGTTCACAAGGAAGATTGTTGTAACAGAAGAGTGACAACCAATAGTTTTTTGATCATTAAATCAAAT 3541
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3542 TTTGTAAACAGTGGCAGGAGCGTGGACTTAAAACAAGGCTTGCTTATTTGGTTTTGTCAAAGTTTTACGAAAAT 3615
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3616 ATATGATATATATTTATACTAAAACTATATAATCCTTAGATTTAGGAAAGCAATCAGTTAATGTCTTTAGCACA 3689
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3690 CTAAAGCAGTATTAAACACAGGTACAAGTTGGAAATTGTAGAAAACTGAAAGAAAACAAGACAAAATGTCTATG 3763
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3764 GTAGGGAATAAAAGAGTTTAAGATATTATGTAAAATTATGTGTATTTTCTTCTCTTTTACATAAATTGTTTGTG 3837
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3838 AAAAGTGTGCTCAACTTTTTTACAAGAGTGATATTAACTTGGATTTATTTTTCAATATAATTTGGAGACCCTTT 3911
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3912 GTTATCCAAATAAAATTGATGAGTTTCTGTGCCTGTAAAAAAAAAAAAAAAAAAAAGAAAAGAAAAGACACTGT 3985
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3986 TGCATGCCCCAGAAAGCTTGTGGTGGGTGGTAAGTTCTCACGAGATTTATTTATCTGAGCAACATTGGGACTGA 4059
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4060 GGGAACATCTGAAAGCTACCATCTTGAAAATTTTTGAGGAAGTGTTTCTGAAATATTTAAAAATACTTAAGTCA 4133
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4134 GTCATTTTGAACAAAAGAAATTGATACAATAAGTTTTTTTTTTTAAGGATGATTGTCTAATTTTGTAATATGTT 4207
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4208 GTTTTTTAAAAACCTGTCTGATGGTGTTTTATACATTTCTAACTTTTTACCTGAGTTATCTCTTTAGTCTTTTG 4281
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4282 GAAAATACCCTACACAATACTAACCTTTAAAACTATCAAATTTTTGTTATAAGATAAATGTTATCTTTGTACTA 4355
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4356 GATAGCAACCCTTTATAAGGTTGTAAGGTATAATAAACTGCTTATTTTTTTACATACTTCATATCAAGCATTTT 4429
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4430 GCAGTCCAATTATATAGTTGAGGATGGTGTATTTTGATATGTATGAAGTTAATATTTTCAAGTAAGCAATCAGT 4503
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4504 CTACTACCATCAGATTATAAGCTTTTTTGTAATAATAGGTACATAAAATGTGTATGAAAAATCTACAATAAACA 4577
Query 220 ------------- 219
Sbjct 4578 TGTTTATCTGATA 4590
