Nucleotide Global Alignment
Description
- Query:
- TRCN0000478282
- Subject:
- XR_001746840.1
- Aligned Length:
- 6541
- Identities:
- 189
- Gaps:
- 6329
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 TGCTGGGATTACAGGCGTGAGCCACTGTGCCCAACCAGGTGTTCTTAAATATAATTTTTTATCTCCTTTCCTAC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CAAGAGGGGTTTTTAGAACTGTTTGCTTGGCAGGTGAAGAATCTGCACGTTGTGGTTCTTTATTACTGAATGAG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 AAAATACCAGACTTTACCTTAGCTTTATTTGTTCCCCAGTTCAACGGAATTTAACCTTAGAATTTCCTAAAGAT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GCTTTCTAAAAGTTTTTTATTTCTCTAAGTGTCATAGTACTGCATTTATGAATCCCAAATTGGCTTCCACTGTC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TATTTAAACTTGATATAAGATACAGGAAGATTATTTTGTCACCACCCTCTTTCTATTCCAAACACTATTTACAT 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 GAAGGAAACTTTAGTAAGAGAAGATATTTTGGAAAAGATTTTGTAACCAACTTACACTTGTGTCTGTTTTTGTT 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 TTTTTTGGTTTAAATTCAAGGGGAGGCCAAGCGTGATGGCTCATGCCTGTAATCCTAACACTTCGGGAGGCCAA 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CACGGGTGGACCGCTTGAGCTCCGGAGTTCCAGAGGAGCCTGGGCAACATGGTGAAACCCTGTCTCTACCAAAA 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 ATACAAAAACATTGCCCAGATGTGGTGGCATGCACCTGTGGTCCCAGCTATTTGAGAAGCTAAGCAGGTGAAGC 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 CCAGGGAGCAAAAAGAGGGAGTTGCCAGATTATTTCTACCTCCACGCCCTCCCTGCCTGTCAAGGACTGAGTCC 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 CAGGAAGATGCCAGCTCCAGTGCTTTCCCGCTCTTGCCGTCTCAGGCCACTCTGGCTGGCCGCTGGGTCCCTCA 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 ACATCCCCTGTTGGTTCCTTTAGCCCAGCCTACACCGCTGGAAATAGGCCCTTTATGAGATTCTCTTCTAAATC 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 CTAGAAGAGTGTACCCTCCATTTCCTGAAGAATCCTGACAAGTATGTAAACATTACTTAATAATTGTTAGGTAA 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 AAATACTATAAATATTAAATTTATAAGTAAATAAAAATATTTAATTTTACATAAGACAAAGCTAAAAATTTCAG 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 TTTATAATTTTTAAACATAGACAATAAATTTCCCAGAAAGAAATTGCTGACTACCAACCAAATTTTCATTTTTA 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 TTTTTTAAATGTTGGAAAAATTTTGTCAGAAAGATTCTTATCAACCAATCAAATTGTGTTAGCAGTTGTGTTAG 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 TAGTCACAAGGAAAATAATCAGTCATATTAGTTTTCTTACTATTGTTCATATTTTGTCTTTCAAAAATAGGTGT 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 AATGTACAAATACTTCTTAATTAGATATGCTTAAATAAAACATTTCATATTGTATTGATTTGGGTATATTGTAG 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 AAAATAAAAAGTTCCTCTTCAAAGCTTCCCTTCTTGTTAAAGAATAAATCATAAGTGTTAGAATTAACAGTTTC 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 TTTTAAAGACTAACTTTATGCTAGACATGCTCACAGACACGTAGTACATTCTATGTCCTCGTACTTTAACCAAG 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 ATATCTGTGCTAGACGTGCACACAGGCATGTCTCAGCTCGCAGCCTATGCCCTTTCCTTATTTGGGAATGTTTA 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 TTCCTTATTTGGAAATGTTATTACTTTTCTAAGTCCTTTCGTAAGCAACTTCATTTTTTTTCCTTTGTTTTTCT 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 ATTGCCTTTACCTGTTTAAAAAAGTTTTAAACTGTTAGCCAATCGGGTTTTAGTTTAGATTGTGAGGTCTGGCT 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 CCAGCCAATGGAGACAGGACACAGTAGCAGGGACAAACTGGGTAAGGGATAAAAATTGCTTCGCTCCATTGTTC 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 CGGGGTGCTCTCGCCATTGTTCCAACTGCCATAAACACCCTTTCTGCAGAAAGCAAAAATGGCCTTGCTGAGAG 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 AATTAAATTTATGTTCGAGTGCTATTTCTTTGTGGCACTGGGGAACAAGCATTCTATTTCTAAATAAACATTTT 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 TACGTATAACAGTACTGAATATAACCATGGACTGTTTGCAAATTATATTGGAATCATGTAGACACAGCTTTAAT 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 AATGGATAATATAATTATTACTTTTTCTAGCCAAAAATCAGGAGCAGACTATGTATACAAGTCTGGAATGGAGG 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 ACTTTCCATTCTAGAAGAAAGAGTGGCCATTTTCAACTCTTCTTCCTTTTGAGACCTCACTAAAATTAGAGGAA 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 CAGAATTTAAAAATACATTACATCTCCATGATAAAGAGAACAGGAAAGGAAATATCAACAGACAAGGGGATTTG 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 ACAGATATTTTTGGAGGGAAGAAACGGTGGAGCAGAGGTAATTAAGCCGATTGGAGAGAGGCTGTCCTGCAGAC 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 CGAGTGAGACAAGGTCCTGGCACTGGAGAGGCTGCTGCCTGGATCCCTCCCCCAACACAAGAAATCAGGAAATC 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 ACCACTCCTCTTGCCCCAGGCCAGAGACTAGGTTTCTGTAGACATGGAAGGTAGAGGCTGCGGACCTGGACCCC 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 AGACACAGGTGAGAGGAGAGGCTTTGCGCTAAAGAGAGAGAGAGAGAGAAAAGGAGGTGGGGAAGAAGAAAGGA 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 AAGAAAGGAGGAAGAGAGAAGGCCAGGCGCGGTGGCTCACGTCTGTAATCCCAGCACTTTGGGAGGCCGAGGCG 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 GGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAACACAA 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 AAAATTAGCCGGGCGTGGTCGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAACGGCGTGA 2738
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2739 ACCCGGGAGGCAGAGCTTGCAGTGAGCCAAGATCGGGCCACTGCACTCCACCCTGGGTGACAGAGCGAAACAAC 2812
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2813 GTCTCAGAAAAAAAGAAAGAAAGAAAGGAGGAAGAGAGAAAAGGAGCGTGGAAAGAAAAGAAAATTTCAGGAGC 2886
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2887 TTCTACATTGGTTATGCCAGCAGAAACAGTTAAGCCATGGAAACTGAGTCACATACACGCTGTTTTTCTTCTCT 2960
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2961 GGTGCATGACCTTTGCTTCTGACCTTTGTGTTGAGATGTTATGAATTAACCACCCTTCCTATTCTTCATTCAAA 3034
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3035 CCTCAACTAAATGACATTGGAGATAGAGACCCTTACCTCTTTACGATGGATGTTAAGTAACTCCCATAGAGTAT 3108
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3109 AGTCAATGGTGGCCAGCCAACTTGTGTGTGTGTGTTTTATATCTTATATTTAAAAAATGAAAAAAATGTTGTAA 3182
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3183 TTCTGGCCAGATACGTGGCTCACAACTGCAATCCCAGCACTTTGGGAGGCCAAGGTAGGCGGATCACTTGAGGC 3256
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3257 CAGAAGTTCGAGACCAGCCTGGCCAACAGGGTAAAACTCTGTGTCTACTAAAAATACAAAAAATTAGCCAGGCG 3330
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3331 GGCATGGTGGCGCACGCCTGTTATCCCAGCTGCTCGGATGACTGAGGCTTGAGAATCCCTTGAACCTGGGAGGT 3404
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3405 GGAGTTTGCAGTGAGCCAAGATCATGCCACTGCCCTCCAGCCTGAGCAACAAAGCAAGACTTTGTCTCCGAAAA 3478
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3479 AAAAAGAGCATGTTGTAATTCTGTTCAGCACCCCTGTTTTTTGCTTATATGAATGATCTTCACCTTTCCCCGCA 3552
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3553 CTGAGGAGTGATGATCACCATTCTTTGGTGTCTGCTACCCTAACACTTGGCGCTTGAATAAACTCTTTTAAGTG 3626
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3627 GAGCCTGAGCCTTTTGATTATTTTAGGTTGACAGGAGGAAGGGAGGAAGGGTGGGTTAAAATTAAATCTGCATA 3700
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3701 CTAAGCAATAATATCCTTGCTGCTCTTCTTCAACTGTTTGTAGGTTATTTCTGCTCTCAGGCTTCTGTTCTACC 3774
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3775 CCTAACTCTCCTGGCTACCCAAAGGCCGGAGGTTATCTACTGGGGAAATCTCAAAAGACTGTAGAAAAAATGTC 3848
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3849 TCAAATTCTGGTTTTGGGAGTCTTCCAAAAAAAAATTTTTTTTAATTTGGCTTGCCTCTTGAATATCCTATAGA 3922
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3923 GAAGTCCCAAACTGACAAACCTGGGCTGTCCTCCCAGATGCTCTACTGAGCTGTCAGTCTCTCCCTCTGGAATG 3996
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3997 GGAATAGAGCACCAAGCATAACCTGTTATTTGAAGAAAGGCTGCTACACTACACACGGACCCAAATGAACAAAT 4070
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4071 ATCAGGAGAACAGAAGTTAGGGGAAACAGAAGTGATGAAGAGAACAGAATAAAAGTTTTATTTTAAAATTATTA 4144
Query 1 ---------------------------------ATGGAGTCTCATTCTGTCGCCCAGACTGGAGTGAAGTGGCA 41
| |||||||.|.||||||||||.||||||||.|.|||||
Sbjct 4145 TTATTATTATTATTATTATTATTATTTGAGACCA---AGTCTCACTGTGTCGCCCAGGCTGGAGTGCAATGGCA 4215
Query 42 TGATCTCGGCTCACTGCAACCTCTGCCTCTC-GAGGTCAAGCGATTCTCCTGCCTCGGCCTCCGGAGTAGCTGG 114
||||||.||||||||||||.|||||||| || |.|.||||||.|||||..||||||.||||||..|||||||||
Sbjct 4216 TGATCTTGGCTCACTGCAAACTCTGCCT-TCTGGGTTCAAGCAATTCTTGTGCCTCAGCCTCCCAAGTAGCTGG 4288
Query 115 GATTACAGGCACACGCAACCATGCCCGGCTAATTTTTTTTGTATTTTTAGTAGAGATGGGGTTTCACCATGTTG 188
||||||||..||.|||.||||.||||.||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 4289 GATTACAGTTACCCGCCACCAAGCCCAGCTAA---TTTTTGTATTTTTAGTAGAGATGGGGTTTCACCATGTTG 4359
Query 189 GCCAGGCTGGTCTCGAACTCCTGACCTCAAG------------------------------------------- 219
|||||.||||||||.||||||||||||||||
Sbjct 4360 GCCAGACTGGTCTCAAACTCCTGACCTCAAGTAATCCACCTGCCTCAGCATCCCAAAGCACTAGGATTACAGGC 4433
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4434 ATGAGCCACCGCACCTGGCCAGAATAAAACTTTTAATATCTTTTATTAACACCGCACCCAGCCAGAATAAAACT 4507
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4508 TCTAAAATCTTTTATTACTATCATCAGATAAAATAAGACATTACATTCATGAAACAGAACAGGTATTAGAATAT 4581
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4582 AAGAGAGAAGAAAATCCTCAAACAAAATTGTGGCAGCTGAACTAAAAACATCAAATAAGGATTGGAGTGTAATA 4655
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4656 TTAAAGAAATTTCCCAGGAAGCAGAACAAAAAGAAAGTAAAATAGAAAAGGATAATAGAGCAAGTGCAATTAAT 4729
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4730 TCAGAGAATCAATCCAGAAGGCCCTGATACCTGACTGAATAGGGTTCCAGAAAGAGGAACAGAGAAAAAGGATG 4803
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4804 TGAAGAGTTGCATTGATAATAGTACTACTAACACTATTTTTTGTTCTTTGTCTTCAAGAAAACCTCTCAGAGTT 4877
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4878 GCAGTGTATGAGTCTCTGGATTGAAAGGGCTCAATAGATGCCCAGCATAACGATGAAGAGGACCCACATCTAGA 4951
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4952 CATATATTGGCCTGAAATTTTCATGTATTTGGGATCAAGAGAAAATCCTGAAAGCTTGTAAATTAATGCTGTTC 5025
Query 220 -------------------------------------------------------------------------- 219
Sbjct 5026 AATATGGTGGTCATTAGCCACGGCTGACTGTTCAGCACTGGAGATGTGGCCACTCTGAATGGAGATGTGCTGTA 5099
Query 220 -------------------------------------------------------------------------- 219
Sbjct 5100 AGTGTAAAATAGACACTGAATTTTGGTGGGCTCAGTAGAAAAAAAAAGAGTAAAATGTCTCATTAATATTTTTC 5173
Query 220 -------------------------------------------------------------------------- 219
Sbjct 5174 ATTTTGAAAACATGTTGAAATGATTTTGTATATATATATTTTTTTTAATTAATTTTTTTTTTTTTGAGATGGAG 5247
Query 220 -------------------------------------------------------------------------- 219
Sbjct 5248 TCTCACTCTATGGCCCAGGCTGGAGTGCAGTAGCGCAATCTTGGCTCACTGCAACCTCCACCTCCCTGGTTCAA 5321
Query 220 -------------------------------------------------------------------------- 219
Sbjct 5322 GCAATTCTCCTGCCTCAGCCTCCTGAGTAGCTGGGACTGCAGGCATGCGCCACTATGCCCTGCTAATTTTTGTA 5395
Query 220 -------------------------------------------------------------------------- 219
Sbjct 5396 TTTTTAGTAGAGACGGAGTTTCACCATATTGGTCAGGCTGGTCTTGAACTCCTGACCTCGTGATCTACCCACCT 5469
Query 220 -------------------------------------------------------------------------- 219
Sbjct 5470 CGGCCTCCCAAAGTGCTGGGATTACAGGCCTGAGCCACCACGCCTGGCCGAAATAATATATTTTTTAAACATTG 5543
Query 220 -------------------------------------------------------------------------- 219
Sbjct 5544 GGCTAAATATAACATATTATTACAACTACTTCCAGTTGTTTCTTTTTATTTTAAGGTGGCTCCTGGAAAATTTT 5617
Query 220 -------------------------------------------------------------------------- 219
Sbjct 5618 AGATGACATAGACGGTTTCTGTTCTGTGTCTGTTAGACGGTGCTCTGCAGAGAAGCAGACAGGTCATGCATAAG 5691
Query 220 -------------------------------------------------------------------------- 219
Sbjct 5692 GACACTGAGGCCAGAATGATATCTGACCTTCAGCAGCAGCTCTAGGAAACTGAAGAAAAATGATCCCCCTATTC 5765
Query 220 -------------------------------------------------------------------------- 219
Sbjct 5766 AGAGAGAAATAGTTTTCAACCTTAGTAGTCTACATTCTGGCAAACTTTCAGTCAACTGAAAGACAGTTAGAGAC 5839
Query 220 -------------------------------------------------------------------------- 219
Sbjct 5840 ATGCAAGCACACAAAAGTTTACCTTCTTTGCTGTCTCCTTGAACGTTCCTGAAGGAAGTACCCCAGGAAATAAA 5913
Query 220 -------------------------------------------------------------------------- 219
Sbjct 5914 CTTGTAAACCAATGGCATGGAAGGCATGGGATTTAAAAGCAGGATGTCCAGTATAGGACTCGGAGCAAGTTGTG 5987
Query 220 -------------------------------------------------------------------------- 219
Sbjct 5988 CAGCAGGTCCAGGAAGCAGACAAGCCCGTGCAGAACAGGAAGTCAGGGGGCTCAGTGGGAAGTCATGGCACCAG 6061
Query 220 -------------------------------------------------------------------------- 219
Sbjct 6062 TGGATTTGCTGACATAGGGAGTCTTCTGGCTCATTGGAAGACACGTATGTAGACAACAAAGTTATTTTTTGAGA 6135
Query 220 -------------------------------------------------------------------------- 219
Sbjct 6136 GGTGATAATTTAAGAAAAAAGTTGTACTCTTCCTGGCTCATGTGAACAGTATCTATATGACACAAATAATAATG 6209
Query 220 -------------------------------------------------------------------------- 219
Sbjct 6210 TGAACTCAAAGACTGTGTGGTATGCTTACACCAGGGGAATGGGGGAGGGAGAGCAAAGTGCACTTGAGTTAGAT 6283
Query 220 -------------------------------------------------------------------------- 219
Sbjct 6284 AACATCTGTCAAGACAGGGAGAAAAAAGATAATGTCTAAAATAAATAACAGCACATGCATACTCCTTAGGAATT 6357
Query 220 -------------------------------------------------------------------------- 219
Sbjct 6358 GGAAGGTAAATGGCAGAAGAAATGGCTTAACAATTTGTACGTGGTTTCTTGTGACTTCTTATGACTGTATAAGA 6431
Query 220 -------------------------------------------------------------------------- 219
Sbjct 6432 CCAGGGAGCAATAGGGAGGGGAGGCACAAGGGATGCTATTTTGTTTCTATTACTATTTGATTTTGTAAAACTAT 6505
Query 220 ----------------------------- 219
Sbjct 6506 ACACATCAATTAAAATGATAAATATTATA 6534
