Nucleotide Global Alignment
Description
- Query:
- TRCN0000478282
- Subject:
- XR_001746841.1
- Aligned Length:
- 5922
- Identities:
- 189
- Gaps:
- 5710
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GTGGCATGCACCTGTGGTCCCAGCTATTTGAGAAGCTAAGGTGAAGCCCAGGGAGCAAAAAGAGGGAGTTGCCA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GATTATTTCTACCTCCACGCCCTCCCTGCCTGTCAAGGACTGAGTCCCAGGAAGATGCCAGCTCCAGTGCTTTC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CCGCTCTTGCCGTCTCAGGCCACTCTGGCTGGCCGCTGGGTCCCTCAACATCCCCTGTTGGTTCCTTTAGCCCA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GCCTACACCGCTGGAAATAGGCCCTTTATGAGATTCTCTTCTAAATCCTAGAAGAGTGTACCCTCCATTTCCTG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 AAGAATCCTGACAAGTATGTAAACATTACTTAATAATTGTTAGGTAAAAATACTATAAATATTAAATTTATAAG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TAAATAAAAATATTTAATTTTACATAAGACAAAGCTAAAAATTTCAGTTTATAATTTTTAAACATAGACAATAA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 ATTTCCCAGAAAGAAATTGCTGACTACCAACCAAATTTTCATTTTTATTTTTTAAATGTTGGAAAAATTTTGTC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 AGAAAGATTCTTATCAACCAATCAAATTGTGTTAGCAGTTGTGTTAGTAGTCACAAGGAAAATAATCAGTCATA 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 TTAGTTTTCTTACTATTGTTCATATTTTGTCTTTCAAAAATAGGTGTAATGTACAAATACTTCTTAATTAGATA 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 TGCTTAAATAAAACATTTCATATTGTATTGATTTGGGTATATTGTAGAAAATAAAAAGTTCCTCTTCAAAGCTT 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 CCCTTCTTGTTAAAGAATAAATCATAAGTGTTAGAATTAACAGTTTCTTTTAAAGACTAACTTTATGCTAGACA 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 TGCTCACAGACACGTAGTACATTCTATGTCCTCGTACTTTAACCAAGATATCTGTGCTAGACGTGCACACAGGC 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 ATGTCTCAGCTCGCAGCCTATGCCCTTTCCTTATTTGGGAATGTTTATTCCTTATTTGGAAATGTTATTACTTT 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 TCTAAGTCCTTTCGTAAGCAACTTCATTTTTTTTCCTTTGTTTTTCTATTGCCTTTACCTGTTTAAAAAAGTTT 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 TAAACTGTTAGCCAATCGGGTTTTAGTTTAGATTGTGAGGTCTGGCTCCAGCCAATGGAGACAGGACACAGTAG 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 CAGGGACAAACTGGGTAAGGGATAAAAATTGCTTCGCTCCATTGTTCCGGGGTGCTCTCGCCATTGTTCCAACT 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 GCCATAAACACCCTTTCTGCAGAAAGCAAAAATGGCCTTGCTGAGAGAATTAAATTTATGTTCGAGTGCTATTT 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 CTTTGTGGCACTGGGGAACAAGCATTCTATTTCTAAATAAACATTTTTACGTATAACAGTACTGAATATAACCA 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 TGGACTGTTTGCAAATTATATTGGAATCATGTAGACACAGCTTTAATAATGGATAATATAATTATTACTTTTTC 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 TAGCCAAAAATCAGGAGCAGACTATGTATACAAGTCTGGAATGGAGGACTTTCCATTCTAGAAGAAAGAGTGGC 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 CATTTTCAACTCTTCTTCCTTTTGAGACCTCACTAAAATTAGAGGAACAGAATTTAAAAATACATTACATCTCC 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 ATGATAAAGAGAACAGGAAAGGAAATATCAACAGACAAGGGGATTTGACAGATATTTTTGGAGGGAAGAAACGG 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 TGGAGCAGAGGTAATTAAGCCGATTGGAGAGAGGCTGTCCTGCAGACCGAGTGAGACAAGGTCCTGGCACTGGA 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 GAGGCTGCTGCCTGGATCCCTCCCCCAACACAAGAAATCAGGAAATCACCACTCCTCTTGCCCCAGGCCAGAGA 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 CTAGGTTTCTGTAGACATGGAAGGTAGAGGCTGCGGACCTGGACCCCAGACACAGGTGAGAGGAGAGGCTTTGC 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 GCTAAAGAGAGAGAGAGAGAGAAAAGGAGGTGGGGAAGAAGAAAGGAAAGAAAGGAGGAAGAGAGAAGGCCAGG 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 CGCGGTGGCTCACGTCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAG 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 ACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAACACAAAAAATTAGCCGGGCGTGGTCGCGGGCG 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 CCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAACGGCGTGAACCCGGGAGGCAGAGCTTGCAGTGAGC 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 CAAGATCGGGCCACTGCACTCCACCCTGGGTGACAGAGCGAAACAACGTCTCAGAAAAAAAGAAAGAAAGAAAG 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 GAGGAAGAGAGAAAAGGAGCGTGGAAAGAAAAGAAAATTTCAGGAGCTTCTACATTGGTTATGCCAGCAGAAAC 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 AGTTAAGCCATGGAAACTGAGTCACATACACGCTGTTTTTCTTCTCTGGTGCATGACCTTTGCTTCTGACCTTT 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 GTGTTGAGATGTTATGAATTAACCACCCTTCCTATTCTTCATTCAAACCTCAACTAAATGACATTGGAGATAGA 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 GACCCTTACCTCTTTACGATGGATGTTAAGTAACTCCCATAGAGTATAGTCAATGGTGGCCAGCCAACTTGTGT 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 GTGTGTGTTTTATATCTTATATTTAAAAAATGAAAAAAATGTTGTAATTCTGGCCAGATACGTGGCTCACAACT 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 GCAATCCCAGCACTTTGGGAGGCCAAGGTAGGCGGATCACTTGAGGCCAGAAGTTCGAGACCAGCCTGGCCAAC 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 AGGGTAAAACTCTGTGTCTACTAAAAATACAAAAAATTAGCCAGGCGGGCATGGTGGCGCACGCCTGTTATCCC 2738
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2739 AGCTGCTCGGATGACTGAGGCTTGAGAATCCCTTGAACCTGGGAGGTGGAGTTTGCAGTGAGCCAAGATCATGC 2812
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2813 CACTGCCCTCCAGCCTGAGCAACAAAGCAAGACTTTGTCTCCGAAAAAAAAAGAGCATGTTGTAATTCTGTTCA 2886
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2887 GCACCCCTGTTTTTTGCTTATATGAATGATCTTCACCTTTCCCCGCACTGAGGAGTGATGATCACCATTCTTTG 2960
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2961 GTGTCTGCTACCCTAACACTTGGCGCTTGAATAAACTCTTTTAAGTGGAGCCTGAGCCTTTTGATTATTTTAGG 3034
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3035 TTGACAGGAGGAAGGGAGGAAGGGTGGGTTAAAATTAAATCTGCATACTAAGCAATAATATCCTTGCTGCTCTT 3108
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3109 CTTCAACTGTTTGTAGGTTATTTCTGCTCTCAGGCTTCTGTTCTACCCCTAACTCTCCTGGCTACCCAAAGGCC 3182
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3183 GGAGGTTATCTACTGGGGAAATCTCAAAAGACTGTAGAAAAAATGTCTCAAATTCTGGTTTTGGGAGTCTTCCA 3256
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3257 AAAAAAAATTTTTTTTAATTTGGCTTGCCTCTTGAATATCCTATAGAGAAGTCCCAAACTGACAAACCTGGGCT 3330
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3331 GTCCTCCCAGATGCTCTACTGAGCTGTCAGTCTCTCCCTCTGGAATGGGAATAGAGCACCAAGCATAACCTGTT 3404
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3405 ATTTGAAGAAAGGCTGCTACACTACACACGGACCCAAATGAACAAATATCAGGAGAACAGAAGTTAGGGGAAAC 3478
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3479 AGAAGTGATGAAGAGAACAGAATAAAAGTTTTATTTTAAAATTATTATTATTATTATTATTATTATTATTATTT 3552
Query 1 ------ATGGAGTCTCATTCTGTCGCCCAGACTGGAGTGAAGTGGCATGATCTCGGCTCACTGCAACCTCTGCC 68
| |||||||.|.||||||||||.||||||||.|.|||||||||||.||||||||||||.|||||||
Sbjct 3553 GAGACCA---AGTCTCACTGTGTCGCCCAGGCTGGAGTGCAATGGCATGATCTTGGCTCACTGCAAACTCTGCC 3623
Query 69 TCTC-GAGGTCAAGCGATTCTCCTGCCTCGGCCTCCGGAGTAGCTGGGATTACAGGCACACGCAACCATGCCCG 141
| || |.|.||||||.|||||..||||||.||||||..|||||||||||||||||..||.|||.||||.||||.
Sbjct 3624 T-TCTGGGTTCAAGCAATTCTTGTGCCTCAGCCTCCCAAGTAGCTGGGATTACAGTTACCCGCCACCAAGCCCA 3696
Query 142 GCTAATTTTTTTTGTATTTTTAGTAGAGATGGGGTTTCACCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCT 215
||||| ||||||||||||||||||||||||||||||||||||||||||||.||||||||.||||||||||||
Sbjct 3697 GCTAA---TTTTTGTATTTTTAGTAGAGATGGGGTTTCACCATGTTGGCCAGACTGGTCTCAAACTCCTGACCT 3767
Query 216 CAAG---------------------------------------------------------------------- 219
||||
Sbjct 3768 CAAGTAATCCACCTGCCTCAGCATCCCAAAGCACTAGGATTACAGGCATGAGCCACCGCACCTGGCCAGAATAA 3841
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3842 AACTTTTAATATCTTTTATTAACACCGCACCCAGCCAGAATAAAACTTCTAAAATCTTTTATTACTATCATCAG 3915
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3916 ATAAAATAAGACATTACATTCATGAAACAGAACAGGTATTAGAATATAAGAGAGAAGAAAATCCTCAAACAAAA 3989
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3990 TTGTGGCAGCTGAACTAAAAACATCAAATAAGGATTGGAGTGTAATATTAAAGAAATTTCCCAGGAAGCAGAAC 4063
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4064 AAAAAGAAAGTAAAATAGAAAAGGATAATAGAGCAAGTGCAATTAATTCAGAGAATCAATCCAGAAGGCCCTGA 4137
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4138 TACCTGACTGAATAGGGTTCCAGAAAGAGGAACAGAGAAAAAGGATGTGAAGAGTTGCATTGATAATAGTACTA 4211
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4212 CTAACACTATTTTTTGTTCTTTGTCTTCAAGAAAACCTCTCAGAGTTGCAGTGTATGAGTCTCTGGATTGAAAG 4285
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4286 GGCTCAATAGATGCCCAGCATAACGATGAAGAGGACCCACATCTAGACATATATTGGCCTGAAATTTTCATGTA 4359
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4360 TTTGGGATCAAGAGAAAATCCTGAAAGCTTGTAAATTAATGCTGTTCAATATGGTGGTCATTAGCCACGGCTGA 4433
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4434 CTGTTCAGCACTGGAGATGTGGCCACTCTGAATGGAGATGTGCTGTAAGTGTAAAATAGACACTGAATTTTGGT 4507
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4508 GGGCTCAGTAGAAAAAAAAAGAGTAAAATGTCTCATTAATATTTTTCATTTTGAAAACATGTTGAAATGATTTT 4581
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4582 GTATATATATATTTTTTTTAATTAATTTTTTTTTTTTTGAGATGGAGTCTCACTCTATGGCCCAGGCTGGAGTG 4655
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4656 CAGTAGCGCAATCTTGGCTCACTGCAACCTCCACCTCCCTGGTTCAAGCAATTCTCCTGCCTCAGCCTCCTGAG 4729
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4730 TAGCTGGGACTGCAGGCATGCGCCACTATGCCCTGCTAATTTTTGTATTTTTAGTAGAGACGGAGTTTCACCAT 4803
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4804 ATTGGTCAGGCTGGTCTTGAACTCCTGACCTCGTGATCTACCCACCTCGGCCTCCCAAAGTGCTGGGATTACAG 4877
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4878 GCCTGAGCCACCACGCCTGGCCGAAATAATATATTTTTTAAACATTGGGCTAAATATAACATATTATTACAACT 4951
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4952 ACTTCCAGTTGTTTCTTTTTATTTTAAGGTGGCTCCTGGAAAATTTTAGATGACATAGACGGTTTCTGTTCTGT 5025
Query 220 -------------------------------------------------------------------------- 219
Sbjct 5026 GTCTGTTAGACGGTGCTCTGCAGAGAAGCAGACAGGTCATGCATAAGGACACTGAGGCCAGAATGATATCTGAC 5099
Query 220 -------------------------------------------------------------------------- 219
Sbjct 5100 CTTCAGCAGCAGCTCTAGGAAACTGAAGAAAAATGATCCCCCTATTCAGAGAGAAATAGTTTTCAACCTTAGTA 5173
Query 220 -------------------------------------------------------------------------- 219
Sbjct 5174 GTCTACATTCTGGCAAACTTTCAGTCAACTGAAAGACAGTTAGAGACATGCAAGCACACAAAAGTTTACCTTCT 5247
Query 220 -------------------------------------------------------------------------- 219
Sbjct 5248 TTGCTGTCTCCTTGAACGTTCCTGAAGGAAGTACCCCAGGAAATAAACTTGTAAACCAATGGCATGGAAGGCAT 5321
Query 220 -------------------------------------------------------------------------- 219
Sbjct 5322 GGGATTTAAAAGCAGGATGTCCAGTATAGGACTCGGAGCAAGTTGTGCAGCAGGTCCAGGAAGCAGACAAGCCC 5395
Query 220 -------------------------------------------------------------------------- 219
Sbjct 5396 GTGCAGAACAGGAAGTCAGGGGGCTCAGTGGGAAGTCATGGCACCAGTGGATTTGCTGACATAGGGAGTCTTCT 5469
Query 220 -------------------------------------------------------------------------- 219
Sbjct 5470 GGCTCATTGGAAGACACGTATGTAGACAACAAAGTTATTTTTTGAGAGGTGATAATTTAAGAAAAAAGTTGTAC 5543
Query 220 -------------------------------------------------------------------------- 219
Sbjct 5544 TCTTCCTGGCTCATGTGAACAGTATCTATATGACACAAATAATAATGTGAACTCAAAGACTGTGTGGTATGCTT 5617
Query 220 -------------------------------------------------------------------------- 219
Sbjct 5618 ACACCAGGGGAATGGGGGAGGGAGAGCAAAGTGCACTTGAGTTAGATAACATCTGTCAAGACAGGGAGAAAAAA 5691
Query 220 -------------------------------------------------------------------------- 219
Sbjct 5692 GATAATGTCTAAAATAAATAACAGCACATGCATACTCCTTAGGAATTGGAAGGTAAATGGCAGAAGAAATGGCT 5765
Query 220 -------------------------------------------------------------------------- 219
Sbjct 5766 TAACAATTTGTACGTGGTTTCTTGTGACTTCTTATGACTGTATAAGACCAGGGAGCAATAGGGAGGGGAGGCAC 5839
Query 220 -------------------------------------------------------------------------- 219
Sbjct 5840 AAGGGATGCTATTTTGTTTCTATTACTATTTGATTTTGTAAAACTATACACATCAATTAAAATGATAAATATTA 5913
Query 220 -- 219
Sbjct 5914 TA 5915
