Nucleotide Global Alignment
Description
- Query:
- TRCN0000478282
- Subject:
- XR_001748858.2
- Aligned Length:
- 4237
- Identities:
- 186
- Gaps:
- 4026
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ACCCGAGCTCATACTAGGGACGGGAAGTCGCGACCAGAGCCATTGGAGGGCGCGGGGACTGCAACCCTAATCAG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 AGCCCAAATGGCGCAGTGGGAAATGCTGCAGAATCTTGACAGCCCCTTTCAGGATCAGCTGCACCAGCTTTACT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CGCACAGCCTCCTGCCTGTGGACATTCGACAGTACTTGGCTGTCTGGATTGAAGACCAGAACTGGCAGGAAGCT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GCACTTGGGAGTGATGATTCCAAGGCTACCATGCTATTCTTCCACTTCTTGGATCAGCTGAACTATGAGTGTGG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CCGTTGCAGCCAGGACCCAGAGTCCTTGTTGCTGCAGCACAATTTGCGGAAATTCTGCCGGGACATTCAGGATC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CTACCCAGTTGGCTGAGATGATCTTTAACCTCCTTCTGGAAGAAAAAAGAATTTTGATCCAGGCTCAGAGGGCC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CAATTGGAACAAGGAGAGCCAGTTCTCGAAACACCTGTGGAGAGCCAGCAACATGAGATTGAATCCCGGATCCT 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GGATTTAAGGGCTATGATGGAGAAGCTGGTAAAATCCATCAGCCAACTGAAAGACCAGCAGGATGTCTTCTGCT 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 TCCGATATAAGATCCAGGCCAAAGGGAAGACACCCTCTCTGGACCCCCATCAGACCAAAGAGCAGAAGATTCTG 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 CAGGAAACTCTCAATGAACTGGACAAAAGGAGAAAGGAGGTGCTGGATGCCTCCAAAGCACTGCTAGGCCGATT 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 AACTACCCTAATCGAGCTACTGCTGCCAAAGTTGGAGGAGTGGAAGGCCCAGCAGCAAAAAGCCTGCATCAGAG 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 CTCCCATTGACCACGGGTTGGAACAGCTGGAGACATGGTTCACAGCTGGAGCAAAGCTGTTGTTTCACCTGAGG 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 CAGCTGCTGAAGGAGCTGAAGGGACTGAGTTGCCTGGTTAGCTATCAGGATGACCCTCTGACCAAAGGGGTGGA 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 CCTACGCAACGCCCAGGTCACAGAGTTGCTACAGCGTCTGCTCCACAGAGCCTTTGTGGTAGAAACCCAGCCCT 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 GCATGCCCCAAACTCCCCATCGACCCCTCATCCTCAAGACTGGCAGCAAGTTCACCGTCCGAACAAGGCTGCTG 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 GTGAGACTCCAGGAAGGCAATGAGTCACTGACTGTGGAAGTCTCCATTGACAGGAATCCTCCTCAATTACAAGG 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 CTTCCGGAAGTTCAACATTCTGACTTCAAACCAGAAAACTTTGACCCCCGAGAAGGGGCAGAGTCAGGGTTTGA 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 TTTGGGACTTTGGTTACCTGACTCTGGTGGAGCAACGTTCAGGTGGTTCAGGAAAGGGCAGCAATAAGGGGCCA 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 CTAGGTGTGACAGAGGAACTGCACATCATCAGCTTCACGGTCAAATATACCTACCAGGGTCTGAAGCAGGAGCT 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 GAAAGACCCCTGGCTTCCCTCATCATCTGTCTGTGGCTATCTGTCCCACAGGGCAGAACTGTAGGACTGAGGAT 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 CCATTATTGTCCTGGGCTGACTTCACTAAGCGAGAGAGCCCTCCTGGCAAGTTACCATTCTGGACATGGCTGGA 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 CAAAATTCTGGAGTTGGTACATGACCACCTGAAGGATCTCTGGAATGATGGACGCATCATGGGCTTTGTGAGTC 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 GGAGCCAGGAGCGCCGGCTGCTGAAGAAGACCATGTCTGGCACCTTTCTACTGCGCTTCAGTGAATCGTCAGAA 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 GGGGGCATTACCTGCTCCTGGGTGGAGCACCAGGATGATGACAAGGTGCTCATCTACTCTGTGCAACCGTACAC 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 GAAGGAGGTGCTGCAGTCACTCCCGCTGACTGAAATCATCCGCCATTACCAGTTGCTCACTGAGGAGAATATAC 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 CTGAAAACCCACTGCGCTTCCTCTATCCCCGAATCCCCCGGGATGAAGCTTTTGGGTGCTACTACCAGGAGAAA 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 GTTAATCTCCAGGAACGGAGGAAATACCTGAAACACAGGCTCATTGTGGTCTCTAATAGACAGGTGGATGAACT 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 GCAACAACCGCTGGAGCTTAAGCCAGAGCCAGAGCTGGAGTCATTAGAGCTGGAACTAGGGCTGGTGCCAGAGC 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 CAGAGCTCAGCCTGGACTTAGAGCCACTGCTGAAGGCAGGGCTGGATCTGGGGCCAGAGCTAGAGTCTGTGCTG 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 GAGTCCACTCTGGAGCCTGTGATAGAGCCCACACTATGCATGGTATCACAAACAGTGCCAGAGCCAGACCAAGG 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 ACCTGTATCACAGCCAGTGCCAGAGCCAGATTTGCCCTGTGATCTGAGACATTTGAACACTGAGCCAATGGAAA 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 TCTTCAGAAACTGTGTAAAGATTGAAGAAATCATGCCGAATGGTGACCCACTGTTGGCTGGCCAGAACACCGTG 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 GATGAGGTTTACGTCTCCCGCCCCAGCCACTTCTACACTGATGGACCCTTGATGCCTTCTGACTTCTAGGAACC 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 ACATTTCCTCTGTTCTTTTCATATCTCTTGCCCTTCCTACTCCTCATAGCATGATATTGTTCTCCAAGGATGGG 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 AATCAGGCATGTGTCCCTTCCAAGCTGTGTTAACTGTTCAAACTCAGGCCTGTGTGACTCCATTGGGGTGAGAG 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 GTGAAAGCATAACATGGGTACAGAGGGGACAACAATGAATCAGAACAGATGCTGAGCCATAGGTCTAAATAGGA 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 TCCTGGAGGCTGCCTGCTGTGCTGGGAGGTATAGGGGTCCTGGGGGCAGGCCAGGGCAGTTGACAGGTACTTGG 2738
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2739 AGGGCTCAGGGCAGTGGCTTCTTTCCAGTATGGAAGGATTTCAACATTTTAATAGTTGGTTAGGCTAAACTGGT 2812
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2813 GCATACTGGCATTGGCCCTTGGTGGGGAGCACAGACACAGGATAGGACTCCATTTCTTTCTTCCATTCCTTCAT 2886
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2887 GTCTAGGATAACTTGCTTTCTTCTTTCCTTTACTCCTGGCTCAAGCCCTGAATTTCTTCTTTTCCTGCAGGGGT 2960
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2961 TGAGAGCTTTCTGCCTTAGCCTACCATGTGAAACTCTACCCTGAAGAAAGGGATGGATAGGAAGTAGACCTCTT 3034
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3035 TTTCTTACCAGTCTCCTCCCCTACTCTGCCCCTAAGCTGGCTGTACCTGTTCCTCCCCCATAAAATGATCCTGC 3108
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3109 CAATCTAATGTGAGTGTGAAGCTTTGCACACTAGTTTATGCTACCTAGTCTCCACTTTCTCAATGCTTAGGAGA 3182
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3183 CAGATCACTCCTGGAGGCTGGGGATGGTAGGATTGCTGGGGATTTTTTTTTTTTTAAACAGGGTCTCACTCTGT 3256
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3257 TGCCCAGGCTAGAGTGCAATGGTGCAATCACAGCTCACTGCAGCCTCAACCTCCTGGGTTCAAGCAATCCTCCT 3330
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3331 ACCTCAGCCTCCTGGGTAGCTAGCACCATGGCATGCGCCACCATGCCCTATTTTTTTTTTTTAAAGACAGGGTC 3404
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3405 TTGCTATATTGCCCAGGCTGGTCTTGAACTGGGCTCAAGTGATCCTCACGCCTTGGCCTCCCAAAGTGCTGGGA 3478
Query 1 ------------------------------------------------------ATGGAGTCTCATTC-TGTCG 19
|||||||.||..|| |||.|
Sbjct 3479 TTATAGGCATGAGCCACTGTGCTTGGCCAGGATTTTTTTTTTTTTTTTTTTGAGATGGAGTTTCTCTCTTGTTG 3552
Query 20 CCCAGACTGGAGTGAAGTGGCATGATCTCGGCTCACTGCAACCTCTGCCTCTCGAGGTCAAGCGATTCTCCTGC 93
.||||.||||||||.|.|||..|||||||||||||||||||||||.||||..||.|.|||||.||.||||||||
Sbjct 3553 TCCAGGCTGGAGTGCAATGGTGTGATCTCGGCTCACTGCAACCTCCGCCTTCCGGGTTCAAGTGACTCTCCTGC 3626
Query 94 CTCGGCCTCCGGAGTAGCTGGGATTACAG----GCACACGCAACCATGCCCGGCTAATTTTTTTTGTATTTTTA 163
|||.||||||..||||||||||||||||| ||| |.|||||||||.||||| |||||||||||||
Sbjct 3627 CTCAGCCTCCCCAGTAGCTGGGATTACAGATCTGCA----CCACCATGCCCAGCTAA----TTTTGTATTTTTA 3692
Query 164 GTAGAGATGGGGTTTCACCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAAG------------------ 219
|||||||.||||||||.|||||||||.|||||||||||||||||||||||||||||
Sbjct 3693 GTAGAGACGGGGTTTCTCCATGTTGGTCAGGCTGGTCTCGAACTCCTGACCTCAAGTGATCTGTCCACCTCGGC 3766
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3767 CTCCCAGAGTGCTGGGATTACAGGCGTGAGCCACTGTTCCCAGCAGGAATTTCTTTTTTATAGTATTGGATAAA 3840
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3841 GTTTGGTGTTTTTACAGAGGAGAAGCAATGGGTCTTAGCTCTTTCTCTATTATGTTATCATCCTCCCTTTTTTG 3914
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3915 TACAATATGTTGTTTACCTGAAAGGAAGGTTTCTATTCGTTGGTTGTGGACCTGGACAAAGTCCAAGTCTGTGG 3988
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3989 AACTTAAAACCTTGAAGGTCTGTCATAGGACTCTGGACAATCTCACACCTTAGCTATTCCCAGGGAACCCCAGG 4062
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4063 GGGCAACTGACATTGCTCCAAGATGTTCTCCTGATGTAGCTTGAGATATAAAGGAAAGGCCCTGCACAGGTGGC 4136
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4137 TGTTTCTTGTCTGTTATGTCAGAGGAACAGTCCTGTTCAGAAAGGGGCTCTTCTGAGCAGAAATGGCTAATAAA 4210
Query 220 ------------------- 219
Sbjct 4211 CTTTGTGCTGATCTGGAAA 4229
