Nucleotide Global Alignment
Description
- Query:
- TRCN0000478282
- Subject:
- XR_001750375.2
- Aligned Length:
- 6452
- Identities:
- 188
- Gaps:
- 6235
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GTAAGAGAGGAGGAAAGAAAGAGGAAAAGAGTGCGAGGGAGTGAGGGAGGGAGGAAAATAAACAACAAAAAATG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TCCTCTTCCTCCCCCACCGGGCAGATCGCAAGTGCGGCGGACATCAAGCAAGAGAATGGGATGGAAAGCGCCTC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GGAAGGGCAGGAGGCGCACCGAGAAGTGGCGGGGGGCGCGGCGGTAGGGCTGAGCCCCCCGGCTCCAGCCCCTT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 TTCCCCTGGAGCCGGGGGACGCCGCGACCGCTGCCGCCAGGGTGAGCGGAGAGGAAGGGGCAGTGGCGGCGGCG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GCGGCCGGAGCGGCGGCGGATCAGGTACAACTCCACTCGGAACTTCTGGGCAGGCACCACCACGCCGCCGCCGC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CGCCGCGCAGACCCCGCTGGCCTTCTCGCCCGACCACGTCGCCTGCGTGTGCGAGGCACTGCAGCAGGGGGGCA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 ACCTGGACCGCCTGGCCCGGTTCCTGTGGTCCCTGCCCCAGAGCGACCTGCTACGTGGCAACGAGAGCCTGCTG 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 AAGGCGCGGGCGCTCGTGGCCTTCCACCAGGGCATCTACCCCGAGCTCTACAGCATCCTCGAGAGCCACAGCTT 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 CGAGTCGGCCAACCACCCGCTGCTGCAGCAGCTCTGGTACAAGGCGCGCTACACCGAGGCCGAGCGAGCCCGCG 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 GCCGGCCGCTGGGAGCCGTAGACAAGTACCGGCTGCGCAGGAAATTCCCCCTGCCCCGCACCATCTGGGACGGC 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 GAGGAGACGGTGTATTGTTTCAAGGAGAAGTCGCGCAACGCGCTCAAGGAGCTCTACAAGCAGAATCGCTACCC 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 TTCGCCCGCCGAGAAGCGGCACCTGGCCAAGATCACCGGCCTCTCCCTCACCCAGGTCAGCAACTGGTTCAAGA 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 ACCGCCGGCAGCGCGACAGGAACCCCTCCGAGACCCAGTCCAAAAGGGCACTGGATGGTGTTTGTTAAATAGGC 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 CCCTTTGGCTTCCTTTGGATTCAAAGGCGACTGCACATAACTGTTCTTGGGTTGAAAGTGCCTTTTCCTACAAC 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 AAGGACAGCCACTTTGTTGAATGAGAGAGTTGTCAGTCTGGTGGAGTAGAAGTTTGGGAGCAGTGAGTCAGATG 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 GCAACCCCAGCACTGAAGATGAATCCAGCAAGGGACATGAGGATTTATCTCCTCACCCACTCTCCAGTTCATCT 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 GATGGCATCACCAACCTCAGCCTTTCCAGTCATATGGAGCCAGTATATATGCAACAAATTGGAAATGCTAAGAT 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 ATCATTAAGCTCTTCTGGAGTTCTGTTGAATGGAAGCTTGGTACCTGCAAGTACTTCACCTGTCTTCCTTAATG 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 GAAATTCTTTTATTCAGGGACCCAGTGGAGTTATCCTTAATGGATTAAATGTGGGAAATACACAGGCAGTGGCA 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 TTGAACCCACCAAAAATGTCATCAAACATTGTGAGCAATGGTATATCCATGACTGACATACTGGGGTCTACTTC 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 CCAGGACGTGAAGGAATTCAAAGTCCTCCAGAGTTCTGCTAACTCAGCAACCACCACGTCCTACAGCCCCAGTG 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 TCCCTGTCTCATTCCCAGGCCTGATACCCAGCACTGAGGTGAAAAGAGAAGGCATTCAAACAGTGGCTTCCCAA 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 GATGGAGGGTCTGTAGTGACTTTTACTACACCAGTGCAAATTAACCAGTATGGCATTGTCCAGATCCCCAATTC 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 CGGAGCAAACAGCCAGTTCCTTAATGGGAGCATTGGATTCTCTCCACTGCAGCTGCCCCCTGTGTCAGTGGCAG 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 CTTCACAAGGTAATATCTCAGTAAGCTCAAGCACTTCAGATGGAAGCACATTTACAAGTGAGTCTACCACAGTC 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 CAGCAAGGAAAGGTTTTCTTGAGCTCTCTTGCTCCCAGTGCAGTGGTATACACGGTTCCTAATACAGGCCAGAC 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 TATAGGATCTGTGAAACAGGAAGGCTTGGAAAGGAGCCTGGTATTTTCTCAGTTGATGCCTGTCAATCAGAATG 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 CACAAGTAAATGCAAACCTGTCTTCTGAAAACATCTCGGGGAGTGGCCTGCATCCACTGGCCTCCTCATTAGTT 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 AATGTATCTCCAACTCACAATTTTTCTCTCAGTCCCTCTACACTACTAAATCCCACTGAGCTAAACCGCGACAT 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 TGCCGATAGCCAACCAATGTCTGCACCGGTGGCAAGCAAATCTACTGTGACATCTGTCAGCAACACTAACTATG 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 CAACTCTTCAGAACTGCTCCCTTATTACTGGTCAAGACCTATTGTCAGTCCCTATGACTCAGGCTGCCCTTGGG 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 GAAATAGTTCCTACAGCTGAAGATCAGGTAGGTCACCCCTCCCCAGCAGTACATCAGGATTTTGTCCAAGAACA 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 TCGTTTGGTTCTGCAATCGGTAGCTAACATGAAAGAGAATTTCTTATCAAATTCTGAGAGCAAAGCAACAAGTA 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 GCTTAATGATGCTGGACTCTAAATCCAAGTATGTCTTAGATGGCATGGTTGATACTGTCTGTGAAGACCTGGAA 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 ACAGACAAAAAAGAGCTTGCCAAGCTCCAGACTGTCCAGCTGGATGAAGATATGCAAGACTTATGAACTTTATT 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 TCCTCCTCACCTCTTTTTGGCATCAGCGGCAAATCTTTTCATGAAGCCCCAAGGACACAAAACATTTTCCCATT 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 TAAAGGAAAACACTCTAGTTTTGCAAGTATATGCATACAAGAGACTTTAGATTGATCTGCATGAAGATCACAGT 2738
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2739 TAAGTATACAGGAGTAGAACTGCATTATTGCAGCCTTTTTGTTCACTTATAAATTTCTCTTTTAAATAGATGGA 2812
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2813 GACAAAGGACAAGGTGAAATGTATCAAGTCAAAGTGAATCATTTAGTTGACTCTATAATTCTAAGGTCAAAATG 2886
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2887 GAACTTGATAGTTTTTTAAATTAAAAAATGTATACACCTAACATAGAAAATTAAAGATAGCTGCAGACCATTAG 2960
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2961 AAATAATACAATTGTTTTTGTTTACTTTTACTCCATGGGCATTGAAAAGGTTAAGAAACATAAATGGTACATAT 3034
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3035 TTTTAAAGTTAAGTAGCATGCATATATATATGCACACACACCTCTTTTTCAGCATTTTTTGAGAAAGTCTTGGG 3108
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3109 TCTCAAACACATTTGTCTCAACACATTTCCAAATGTGATTTCTAATAGCTCAGTGTGGCTGAGAAAGTGCGGAA 3182
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3183 CTCCACTAAAAACTCTGAAACTTCAGTATAAATGTAAATATATCAGTTCTATAAGCAGGATTTGAGTAATTACA 3256
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3257 GTGAATTTTATTTTTAATGTATATGTTTCTCTTCAGGCGCTATGAACTGAAAAATATGTTTTCTTACTGTTTAA 3330
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3331 TTTATTTTTATTGTTTGAACAGGAAGTGAACATAGTCGTTTCCAACAAAGTTTTACTTTTTGTAGGATTTTAAA 3404
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3405 AATAATGATTTTTACCAGGAATCTATTAAGGTCAATATTAATAACACTGAAACAGGAAATCTAACTCCCAATAT 3478
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3479 TGGAATTTTGGTACTTTTTTTCACATCCTTGTTCTTTATTTAGCAACTCTGATTCATTTAAATATGTTTTTTAT 3552
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3553 AGAATTCTATGTGCCTTTTTACCTCGTGGCCTTTTTATTGGTAGTAAGGTACAGAAGTGTCAACAGAAGCACTG 3626
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3627 ATGGTTCTTTTCTACTATCTAACAGGGTTAATTTCACCACAAAATTGCTTTAAATCTGAAGAACTTAAGTTTCA 3700
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3701 CTAAATAATATATATGACATTTATCACACAAATGGATAAACAACTAATTATTGTTGATACTTTTCATTACAAGG 3774
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3775 AAAATAAGTTATAAATACCATGTCAAATTGATTATACAGGCTATGAAAACCATTTTAAAGGAAAGAAAATATGT 3848
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3849 AAATTCTATTGAGCAAAATTCTGTCCTGTTGAAACTTAGTTCTAAAGGTTTTGAATCAGTTGTTACACTCTGAC 3922
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3923 ACATGACTGTTGTTTGCACTATATTATCATGTCTTCTTTAAAAGTAAATATTTTTGGTTTCTGTAAGAAGCTTG 3996
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3997 TTTAATAATGTTGTAAGCCGTGGCTATAGTTTTATCAAGACTCTGAACACAAGATGTAACAATGCAAATAAATT 4070
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4071 TATGTAGTGAGTAAAGTTGCTCTCTAGTCTCTGAAAAGCAAAAAAAGTGAGAAAATAATTTCTTCAGAGATAAC 4144
Query 1 ---------------------------------------------------------------ATGGAGTCTCA 11
||||||||||.
Sbjct 4145 TTCAAGTTGTTGAACATAAAGGTGTTAGATGTTAGCACATCTTGCTTTTTTTTTTTTTTTGAGATGGAGTCTCG 4218
Query 12 TTCTGTCGCCCAGACTGGAGTGAAGTGGCATGATCTCGGCTCACTGCAACCTCTGCCTCTCGAGGTCAAGCGAT 85
.|||||.||||||.||||||||.|||||||.|||||.||||||||||||.|||||||||..|.|.|||.||.||
Sbjct 4219 CTCTGTTGCCCAGGCTGGAGTGCAGTGGCACGATCTTGGCTCACTGCAAGCTCTGCCTCCTGGGTTCACGCCAT 4292
Query 86 TCTCCTGCCTCGGCCTCCGGAGTAGCTGGGATTACAGGCACACGCAACCATGCCCGGCTAATTTTTTTTGTATT 159
|||||||||||.||||||.||||||||||||.|||||||||..||.||||||||||||||| .||||||||||
Sbjct 4293 TCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCACCTGCCACCATGCCCGGCTAA--ATTTTTGTATT 4364
Query 160 TTTAGTAGAGATGGGGTTTCACCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAAG-------------- 219
|||||||||||.|||||||||||.||||.||||||.||||||.||.|||||||||||..|
Sbjct 4365 TTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTTGATCTCCTGACCTCGTGATCTGCCCGCCTCG 4438
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4439 GCCTCCCAAAGTGCTGGGATTATAGGCATGAGCCACTGTGCCTGGCCACATCTTGCTTTTTTTTTTATGATCAG 4512
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4513 AACAAAGGGCCCACTCTAGTTCTCTACATGTCAATCAATCAAGCATGTTGAATAAGGGACATAGAGGATTTAAC 4586
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4587 TTTTGTTATCATAAATGGAACTTGCAGGCATATATCAAGAACCCTATGAAGAATTCCTCTCCCATCATTTTGAT 4660
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4661 AAAGAACTACATCATTTTTGATAGAATTGGTGAATGTTCCTAAACTGCTGAAGCTACATGTTTTTTGTTTTGTT 4734
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4735 TTACAAAGTCAGGTGTTTGAGAGTTCTTTTCCACTCTACTACTACTCATAGAGCTTGTTTTTTCTTTGGGTGTG 4808
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4809 TGCTGATCCTGTTACTGAGATTAATTACATGGCTCTGCAGTGTAGTTTACATAAAAATGATGTTTTCCACTTGA 4882
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4883 TTGCTGCAGATATCAAGAGTTTGTTATTTTCAAATACCCATCCAACAAGAGAGATGGGGAGGTTTTTAGTTATA 4956
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4957 TATGCTATATATATATATATAACTGGAAATGTTTTATATGTTTTCCGAAAATACAATAAGCCTCTCTTTTATTC 5030
Query 220 -------------------------------------------------------------------------- 219
Sbjct 5031 AGTGTTCTTCCTCTTTTCTCCCTTATGAAAAAGAAAAGATAGCACAAAACTTAAGACTTACCTAGGAAACCCAT 5104
Query 220 -------------------------------------------------------------------------- 219
Sbjct 5105 TCATATTCCCACCATGATGTAATTATAACCCTACAATTACTTCAGGTAGCTACACAATATACCAGGTAAGAATC 5178
Query 220 -------------------------------------------------------------------------- 219
Sbjct 5179 AATGCACAGTATAAAGAACTTATTGTTCTTTTCTATTCTTTCAGTTGAATAAGGGCCAGTTGGTATGCAGCCCA 5252
Query 220 -------------------------------------------------------------------------- 219
Sbjct 5253 TGTATATGTGAATGGAGTAAGATAAACCCCATGATCTCCTTGCACAGAATTGCAAATGTCTTTTGCCATACCAA 5326
Query 220 -------------------------------------------------------------------------- 219
Sbjct 5327 GGGCCAGACTCAGAACCCTTGGAGTCATGTGGCAGAATTTCCCTCTTACATAAACCAATGCTTGAAAATGCTGC 5400
Query 220 -------------------------------------------------------------------------- 219
Sbjct 5401 AAATGACCCTCTAATGATCCCTGAAGATCAAAACAGGGGTAAATGACTCCCTGCAAAACCCAACCCATGCTGCT 5474
Query 220 -------------------------------------------------------------------------- 219
Sbjct 5475 GGCTGTGGGATTTTTGGTGTAAGCCTATCTATGCACTCTATCAGCCAGAATTTGGCATTTAGCTCTTAGTTAAA 5548
Query 220 -------------------------------------------------------------------------- 219
Sbjct 5549 TCTAGTAAAGGACAGTCTATTGTTTAAAGAGAAGGTGCATTTGTTCCTCAATCAAGCAAGAGCACCTGTGTTGT 5622
Query 220 -------------------------------------------------------------------------- 219
Sbjct 5623 ACTGCTTTATATCTCATGTATATTTATAGTAATGAAAAGACTTTTTAAATTGTACACGTTTCAGTGCCTTTCTT 5696
Query 220 -------------------------------------------------------------------------- 219
Sbjct 5697 GTGTTATGAAAGGCAGGTAGATATTATAGCCATAGGTAAAAATCCATAGTTAAATTGCACACTGACCTTAAATC 5770
Query 220 -------------------------------------------------------------------------- 219
Sbjct 5771 TCTCTGTGTATGCCCTTGTATCTTGCATGTTAAAAGTTGGATTATTGGGCATGTGTGGCAGCCTGCCCTGCTAC 5844
Query 220 -------------------------------------------------------------------------- 219
Sbjct 5845 ATGCTAGACAAGTGTGCTTTAGTACATAGCCACAAGTTCTTCATTCTTTAAAATGTTTTGACAGATCATCTCAT 5918
Query 220 -------------------------------------------------------------------------- 219
Sbjct 5919 AATAAAAATAATTCAGGAAAACTATGGGGAAATAGTTACATTTCACAAAAGATATTTTAAACTCTTTGTAAAAC 5992
Query 220 -------------------------------------------------------------------------- 219
Sbjct 5993 TTAGATAATAGAGCCTAGCAGTTACTTTGTATCTAATTGATACATTTTATGTTAATTTACCACCATACATTTTA 6066
Query 220 -------------------------------------------------------------------------- 219
Sbjct 6067 TTAATCAAAATTGTATAGCATGTGACTCTTTTGGCTTTCAGAGTTCTCAAAAATATTATTTTGTTGCATGTACT 6140
Query 220 -------------------------------------------------------------------------- 219
Sbjct 6141 GTATGTTTAGAGGCAACCAATTATATACTCAATATGGTTTTACTGTGCCTTACACAAAGAGAAACTCTATACAG 6214
Query 220 -------------------------------------------------------------------------- 219
Sbjct 6215 AATGTATATCATGGGGTGGGGTAACAGAGTCTTTACTGCACTGTTAGGTGATGGCACACAGAGCATGTCCCAGA 6288
Query 220 -------------------------------------------------------------------------- 219
Sbjct 6289 ACATTTCTGTGCTTAATTACCCAACCAAAGAGATCTGAAGTATGTATGTCGTACTGTAATGGGGGTTTATGCCT 6362
Query 220 -------------------------------------------------------------------------- 219
Sbjct 6363 GGACAATTAAGTGTTTTATTTGTTTTCTGAAATGATGTGAACTTATTTTTCTAAACACTATGCTAAATAAACTT 6436
Query 220 -------------- 219
Sbjct 6437 TATATTTATACATA 6450
