Nucleotide Global Alignment
Description
- Query:
- TRCN0000478282
- Subject:
- XR_001751398.2
- Aligned Length:
- 3832
- Identities:
- 189
- Gaps:
- 3616
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 AATCTTGGCGGGAAGGCGCCGGCCGCTAAGAAGCCGAAAGATGTCCAGGTCGGGCGCGGCGGCTGAGAAGGCGG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 ACTCCAGACAGCGACCCCAGATGAAGGTAAATGAATATAAAGAAAATCAAAACATCGCTTATGTGTCTCTGAGA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CCAGCACAGACTACAGTTTTAATAAAAACAGCTAAGGTCTATCTTGCCCCCTTTTCACTCAGTAATTACCAGCT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 AGACCAGCTTATGTGCCCCAAATCCCTATCAGAAAAGAATTCTAACAATGAAGTGGCGTGTAAGAAGACTAAAA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TAAAGAAAACTTGCAGAAGGATTATACCTCCAAAGATGAAAAACACATCTTCCAAGGCAGAATCCACGCTGCAA 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 AATTCATCCTCAGCTGTTCATACTGAAAGTAACAAGCTACAACCCAAGAGAACGGCAGATGCGATGAATCTCAG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 TGTTGATGTGGAAAGTAGTCAGGATGGAGACAGTGATGAAGATACCACACCATCCCTGGATTTTTCGGGATTGT 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CACCCTACGAAAGGAAGAGACTGAAGAACATATCAGAAAACGCAGACTTTTTTGCTTCTCTTCAGTTGTCTGAG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 TCTGCTGCAAGACTCCGTGAAATGATAGAGAAGAGACAGCCTCCTAAATCCAAAAGAAAGAAGCCTAAGAGAGA 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 AAATGGGATTGGATGTAGAAGGTCAATGCGATTACTAAAAGTTGATCCTTCGGGAGTTTCATTACCAGCAGCTC 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 CAACACCGCCGACATTAGTAGCAGATGAAACTCCTTTGTTACCTCCTGGGCCTTTAGAAATGACTTCTGAAAAT 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 CAAGAAGACAACAATGAACGATTTAAAGGATTTCTGCACACATGGGCAGGAATGAGCAAGCCAAGTAGTAAGAA 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 CACTGAGAAGGGATTATCTAGCATTAAAAGCTACAAAGCCAATTTAAATGGCATGGTCATTAGTGAAGATACCG 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 TTTACAAAGTTACCACAGGCCCAATATTCTCTATGGCTCTCCATCCATCAGAAACTAGAACTTTGGTAGCAGTT 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 GGGGCCAAATTTGGGCAAGTTGGACTTTGTGATTTGACCCAGCAACCTAAAGAAGATGGAGTTTATGTTTTTCA 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 TCCCCATAGTCAGCCAGTTAGCTGTCTTTACTTCTCACCCGCCAATCCGGCCCACATACTGTCACTGAGCTATG 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 ATGGCACGTTACGCTGTGGGGATTTTTCCAGGGCTATTTTTGAAGAGGTGTATAGAAATGAAAGAAGTAGCTTT 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 TCCTCCTTCGACTTCTTGGCAGAAGATGCCTCCACTTTAATAGTAGGACACTGGGATGGAAATATGTCACTGGT 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 GGATAGACGGACACCTGGAACTTCTTATGAGAAACTTACCAGTTCTTCTATGGGAAAAATAAGAACTGTTCATG 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 TCCACCCAGTGCATAGACAGTATTTTATCACTGCCGGATTGAGGGATACTCATATTTATGATGCAAGGCGATTG 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 AATTCCAGGAGAAGTCAGCCTTTGATTTCTTTGACTGAACATACAAAGAGCATTGCTTCCGCCTATTTTTCACC 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 TCTTACTGGTAACAGAGTGGTGACCACATGTGCTGATTGTAATCTGAGAATTTTTGACAGCAGCTGTATATCTT 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 CTAAGATTCCGCTCCTCACCACCATCAGGCACAACACTTTCACTGGGCGATGGCTGACCAGGTTCCAAGCCATG 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 TGGGATCCTAAACAAGAAGACTGTGTCATAGTTGGCAGCATGGCCCATCCACGACGGGTAGAAATCTTCCATGA 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 GACAGGAAAGAGGGTGCATTCGTTTGGTGGAGAATACCTTGTCTCTGTGTGTTCCATCAATGCCATGCACCCAA 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 CTCGGTATATTTTGGCTGGAGGTAATTCCAGCGGGAAGATACATGTTTTTATGAATGAAAAAAGCTGCTGAGTT 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 TTTGGTTTAGGAACATCAATTTGTTCAAATTGACCACTGTCTAAGGAGCCTAGTAATCGGCGTGCCTTAGTGTG 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 TTTATGTGGTAATGTGTTACATTTAGCAATTATAACATTGTTTTATTAATAAGACTATAAGAAGAGTGTACTTT 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 TAGTAAGGGAGAAGTCTTGGAGGGTTGCTTCTGCAGGACGGGGAGGGAATTTGAGGGGAGGCTGAGGTGCCGTC 2146
Query 1 -----------------------------ATGGAGTCTCATTC-TGTCGCCCAGACTGGAGTGAAGTGGCATGA 44
|||||||.|...|| |||.||||||.||||||||.|.|.||..||
Sbjct 2147 AGGACTTTTTTTTTTTTTTTTTTTTTGAGATGGAGTTTTGCTCTTGTTGCCCAGGCTGGAGTGCAATAGCGCGA 2220
Query 45 TCTCGGCTCACTGCAACCTCTGCCTCTCGAGG-TCAAGCGATTCTCCTGCCTCGGCCTCCGGAGTAGCTGGGAT 117
|||.|||||||.||||||||.||||| |.||| ||||||||||||||||||||.|.||||..||||||||||||
Sbjct 2221 TCTTGGCTCACCGCAACCTCCGCCTC-CCAGGTTCAAGCGATTCTCCTGCCTCAGACTCCTAAGTAGCTGGGAT 2293
Query 118 TACAGGCACACGCAACCATGCCCGGCTAATTTTTTTTGTATTTTTAGTAGAGATGGGGTTTCACCATGTTGGCC 191
|||||||||..||.||||.|||.||||| |||||||||||||||||||||||||||||||||.||||||||||
Sbjct 2294 TACAGGCACCTGCCACCACGCCTGGCTA--TTTTTTTGTATTTTTAGTAGAGATGGGGTTTCATCATGTTGGCC 2365
Query 192 AGGCTGGTCTCGAACTCCTGACCTCAAG---------------------------------------------- 219
|||||||||||||.||||||||||||.|
Sbjct 2366 AGGCTGGTCTCGAGCTCCTGACCTCAGGTGATCTGCCCGCCTCGGCCTCCAAAAGTGCTGGAATTACAGGCGTG 2439
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2440 AGCCACCATGCCTGGCCATCAGAACTTGTAATCAAGACAGTATGTTGAGAAATTCTAACATTATAAATTACAAA 2513
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2514 GCTTTGACTATTAAAGTTTTTGTGATCTAATGATACAGTTTTGATTCTATAGTAATTTGTGGCTTATTTTATAG 2587
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2588 TTTATAATGAATACTTATTTCTAGACTCATACACTGGAAGGGGACCCGGAAAGGTAATGTAACTCAGTGATTTT 2661
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2662 AAAACTTGATTTTTTTAACTGAGAACTTTTTTTGCCCCCTGCCTGTAGGTTAAGTCTTACGTGAAATGCCAAGA 2735
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2736 TAATTGCTGAGCAGCTTTGGTTACCCAGGGCGGGGTCTGGGTCTGTCTGTACTTTGCCTTTACTCTAGATGGCT 2809
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2810 CCTGAGACACAGGCAGGACTCCCAAGCACCGGGTTGGGATCTGCCCTGGTCCCGGCATTCCAGTATAAGATTGC 2883
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2884 CTCAGACCTGTGTTTTTCAGACTGGGTTTTTGCTCTTCACATGAAATCAAGTTAGATGACAATGACTGGTGTTG 2957
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2958 AAAAAAATGAAAAGGAAAGAATTTGTAAAGAACAGAAAATATATTTGATACCATGGGTAATGGATAAAGAAGTT 3031
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3032 AAAGCTACTGCTTAGAATGAAGAAGGCCCCAGGCTTACCTGTCCCGATCTTTAAACTGTCCGAAGGAAATTCAA 3105
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3106 TAGCCTGTTAAGTGAATACCTTCATTCTTACTTGTATTTGGGGGAATATTATGAAATACTCACCACTTTTGGTA 3179
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3180 TTTTATGAAAATGTTTTCTTTTCAGAAGTTATGGTAATTTCAATGTGTTTGTTGTTGGGAGGGGAGCTGCCAAA 3253
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3254 TCAGTTACTAATATTACTGTGTGACATCTATCCAACTTTTTTCATTATTCTTCATTGCCAAATACTGAAAGACT 3327
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3328 TGTAAATGGCTTTGGCAATATGTTTGAATTCTAAGAGGAAATATTTTCCCATAATTGTATATCAGAGAAATATA 3401
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3402 GTGATATACAATTTCCTTGAAAACCAATTTCTAAATAATTTTCTTCTCTGTAATCTAAGTGTAAAAAGGTTTAG 3475
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3476 TTTTTTAATAGGTTTAGGTGTTTATAAGCAATAGTTCTCTATTTTCTAGTTGATATAAGTAGAAGAATTGACAA 3549
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3550 GTGAGATGGAAATGTTAATTTATAAAGGGAAAGAAAAGCTAGGTGAGGTTGAGTTATAATTAAACTGTTCAGGA 3623
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3624 AACATCGTAAAGGCTTTAGGCTCCCTTTTTCATTTCTATACCAATTAATCTCATGGGTTCTAGAGTGGTTAGTT 3697
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3698 CTACGGGAATTGTTTTTGTTTTTGTTTTTAAAGATGCTGAAAACTACTCTCAATCAAATTAGTACCATCATTTA 3771
Query 220 ---------------------------------------------------------- 219
Sbjct 3772 AGCTTTGAATACTTGGCAGTAATTGCCTGGGCTCGTCAATAAATGTTAGCAAATTCTT 3829
