Nucleotide Global Alignment
Description
- Query:
- TRCN0000478282
- Subject:
- XR_001752592.1
- Aligned Length:
- 4873
- Identities:
- 190
- Gaps:
- 4657
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GAGTCCGAGCCGCCGCCGCCATGAGCTGCCCCGTGCCCGCCTGCTGCGCGCTGCTGCTAGTCCTGGGGCTCTGC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CGGGCGCGTCCCCGGAACGCACTGCTGCTCCTCGCGGATGACGGAGGCTTTGAGAGTGGCGCGTACAACAACAG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CGCCATCGCCACCCCGCACCTGGACGCCTTGGCCCGCCGCAGCCTCCTCTTTCGCAATGCCTTCACCTCGGTCA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GCAGCTGCTCTCCCAGCCGCGCCAGCCTCCTCACTGGCCTGCCCCAGCATCAGAATGGGATGTACGGGCTGCAC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CAGGACGTGCACCACTTCAACTCCTTCGACAAGGTGCGGAGCCTGCCGCTGCTGCTCAGCCAAGCTGGTGTGCG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CACAGGCATCATCGGGAAGAAGCACGTGGGGCCGGAGACCGTGTACCCGTTTGACTTTGCGTACACGGAGGAGA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 ATGGCTCCGTCCTCCAGGTGGGGCGGAACATCACTAGAATTAAGCTGCTCGTCCGGAAATTCCTGCAGACTCAG 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GATGACCGGCCTTTCTTCCTCTACGTCGCCTTCCACGACCCCCACCGCTGTGGGCACTCCCAGCCCCAGTACGG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 AACCTTCTGTGAGAAGTTTGGCAACGGAGAGAGCGGCATGGGTCGTATCCCAGACTGGACCCCCCAGGCCTACG 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 ACCCACTGGACGTGCTGGTGCCTTACTTCGTCCCCAACACCCCGGCAGCCCGAGCCGACCTGGCCGCTCAGTAC 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 ACCACCGTCGGCCGCATGGACCAAGGAGTTGGACTGGTGCTCCAGGAGCTGCGTGACGCCGGTGTCCTGAACGA 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 CACACTGGTGATCTTCACGTCCGACAACGGGATCCCCTTCCCCAGCGGCAGGACCAACCTGTACTGGCCGGGCA 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 CTGCTGAACCCTTACTGGTGTCATCCCCGGAGCACCCAAAACGCTGGGGCCAAGTCAGCGAGGCCTACGTGAGC 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 CTCCTAGTGACTAGGCTACTTTTGCCCACTGTAAAAGGCACCGTCATCCTGGTATCAAGATTCTGGAGAGGCCA 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 GATTTGAAATCAAGTTTGTTTGAGACGTGGATGACGATGGGGAAGATGTCCATCCTGTGCAGGGTGCAGACACT 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 GTCCAGCTGGACGTCCAGGAGGGCATGGGTGTTCTTTGTGGGAGGGAGAGAAGAAGTGAGTCAAGATCACAGGC 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 CTCAGAGGAAGCAAAGGGAGCCAACGCCCAGCTGAGGAAACTGAGATTCAAGGAGTTGGGAGACCTCACCCACA 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 GTCACGTGGATCCTAACTGGCTGAGATGAGTTTTGGGCTCCTGCTGGGCTGTTGGGACCCAGAGGTCGGCGACA 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 AGGTCACCCAGGTCTCAGGTCGGTCCCTGTACCTTTATCTCATCCCCCTCCTCTGCATTCCTGAAACCCTTCCC 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 AGGACAGCTCCCCTGCCCACCCCGCCCTTGACCTCACCTTTTCCATGAGGGACTCCACAGCATGGCGGGTCACC 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 CAGCAGCGGCCCCCGGACACCTCTCCCTCCTGGATGATGTCCCCTCTCTGGCTCCAGGCCTCATACTCCTCCTG 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 GCTCAAGTACTCTACAGCACTGGGAGAAGCTCTTCTTAGGATGTCCACTTTACAAACCTGACCCTGCACACCCC 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 GCTCTGTGCCCTGCACCTCCATCCTGAACTATCTGGACACAGCAGTGCCTCCTGCCACCCTGCCAGCACCGAGC 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 CCCTCTTCCAGCCCACCCCAGTGGGGTCCAGGCCCCTCCCTGGAGCCTCACCTTGCGGGTCACGGTGCACTGCT 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 GAGTCATGTCCTGGATGAGGGCTATGAGCTGCTGCTGAGCCCTGCAGAGACCAGCAGAGGCCCTGACCCAGCTG 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 CCTCCTGCCAGGCTGGAGCGCTCCATCCTGGCGGCCATGCCAGTCTCCAGAGCTTTCAAAAGACTCCAGGGCCT 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 CGGCCCACCCCTGGAGATGCTGATTTACTTGTCCTGGGGCGGGACCCAGGGGGTGCTGTTGAGCAGCCAGCGTA 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 CAGGGCCCCACTCCAGGACCTCAATATTCATGGTGGGTCCCTGGCCTGCAGCCTGGAGTCACCGAGAGAGCTGT 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 TAGAAATGCAGAGTGCCAGGCCTCTCCCTGGACCTGCTGGCTCCGATCCCCAGGGGACTTGAGTTTGCAATGAG 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 TGATGGGGGTGCTGAGCTCAACACTCCTGCTTTCTAGCACTGTGCGTTCCGTGCACTTGAAACTTGGAGCCTCC 2220
Query 1 ---------------------------------------------------ATGGAGTCTCATTCTGTCGCCCA 23
|..||||||||.|||||||||||
Sbjct 2221 CATAGGCTGATCTAGAACAATGGTTTCCTTTTCTTTTTTTTTTTTTTTGAGACAGAGTCTCACTCTGTCGCCCA 2294
Query 24 GACTGGAGTGAAGTGGCATGATCTCGGCTCACTGCAACCTCTGCCTCTCGAGG-TCAAGCGATTCTCCTGCCTC 96
|.||||||||.|.||||...|||.||||||||||||||||||||||| ||.|| |||||.||||||||||||||
Sbjct 2295 GGCTGGAGTGCAATGGCTCAATCCCGGCTCACTGCAACCTCTGCCTC-CGGGGTTCAAGTGATTCTCCTGCCTC 2367
Query 97 GGCCTCCGGAGTAGCTGGGATTACAGGCACACGCAACCATGCCCGGCTAATTTTTTTTGTATTTTTAGTAGAGA 170
.||||||.||||||||||||||||||||||..||.||||.||||.||||| .|||||||||||||||.||||||
Sbjct 2368 AGCCTCCTGAGTAGCTGGGATTACAGGCACCTGCCACCACGCCCAGCTAA-GTTTTTTGTATTTTTAATAGAGA 2440
Query 171 TGGGGTTTCACCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAAG------------------------- 219
..|||||||||||.|||..||||||||||||||||||||||||||| ||
Sbjct 2441 CAGGGTTTCACCAGGTTACCCAGGCTGGTCTCGAACTCCTGACCTC-AGATGATCCACCCGCCTCGGCCTCCCA 2513
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2514 AAGTGTTTGGATTACAGGTGTGAGCCACCATGCTCGGCCTAGAGCAGTGGTTTTCAATGGAGCAAGGCAGGGGG 2587
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2588 CAATGTCACTCCCCAGGGAGGGTGACCAGCTGTCCCTGCTTGCCCAGGACCGAGGGGCTTCCCTGCAAGTGGGG 2661
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2662 CTTTCAGTGCTAAGACCAAGACAGTCCTAGGAGAACCAGGGGACCCTTGGCAACCTATAGAGACATTTCTGGTT 2735
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2736 GTCACAGCTGGGGCATGGGAGTAGTCCCGGCATCCTGGGTAGGGCGGCCAGGGATGCTGCTCTATATCCTGCAG 2809
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2810 TGCCCAGGACGGCCCCACCACAGACGGGGATCCAGCCCCAAACGTCCATGGTACCAAAGCTAAGAAACCCAGAG 2883
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2884 CTAAGAAACCCAGATCTAGAATGTTCTAGAATGAACATTTCATTTGCAATATATAAAGCATCCATCACAAAGAA 2957
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2958 ACAACATCTTCAGCAGTGATCTTGGCAGGCTTCCCTCCTTAGGGGGGTCTCACCACGCCCACCCTCTATTGCTG 3031
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3032 GGCAGGAGGAGGAAGCCGAGGCAGGCTGGGTGCCATTTCCCTGTGGGCCTCTCTGGGGACGCACCGAGCTCGAG 3105
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3106 GCAGCTGCTCACCTGGAGTAGTTGGGGATGGTGCCGTGCGCGGCAGTATCCTTCATGGTGTAAGAGTTCACGCG 3179
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3180 GTGGGCATGCCAGCAGCCGCAGCCCTGGAACATGGTGTCGGTGACGTGCAGGACCTCGTTGCAATGCACCTGCA 3253
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3254 GCTCCCCTTTGGCCCTGCCCTCCATGGCCAGGTTGACCCGGATGTAGAATGAGTCCCCCGAGGTCGCCACTTTG 3327
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3328 GCCTCCAGGTCCTGGAGTAGCCTCTTATAACCTGATAAAAGGGGACATGAGCCACAGATGAGCCACAGATACGA 3401
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3402 GCCTCTGCGAGGAAGGTTGCAGAAAATTAAAGTAGGAGAGAAGGAAGGACCCTCCCAGTCTCAGAAGCTGCTCT 3475
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3476 GGCACTGGAGTCAGTGGGTGGGAGGTTTCCAGCTGGCTTGGGGGCCTCCTGGGGACCTGGGGCACAGCCTGGCT 3549
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3550 GATCCTCTCTTGGCTCTGGGGGTCCCTGGCTGCTGGGCGTGCAGAAGAACCACCAGGGACTTAAGGGTCATGGA 3623
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3624 GTCTGGCCAGGCAGCTGTGCACACGAGAGGAGTGGTATGTGTACCGTCCGTGTTGACCTTCACAGACAGGCAGC 3697
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3698 AGAAGCCGTCCACCCTCCTGAGAAGCCCCACGGCCTCCTCCAGGGTCGTGTCCTCCAGGACTGCCTTGAACAAG 3771
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3772 GGCTCTGAGGCTTCGTAATCAACCTGAGGGCAAGTCGAGAAGGTCAGTCTCTTTCCCCCGGGACTCTGAATCCA 3845
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3846 GCCAGAAGACAGAAGGCGCTGAGGGCACTGAGGCGAGGCGCGGGCCAGCCCTGCCGTAGGACCACTGCCTGCAC 3919
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3920 GCCTTGGTCAAAACAAAGCCACACACCAGAGCCTCTGTGGGGCCTTCACACCTCTAGTGATGCGTGCTACACAT 3993
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3994 AGTGCTGGCCAGAGAGTCAACTGCCAACCCTTCCCCAGTCGAGATCGGGGGTTCTTTGTGATAAGCACTTTCCT 4067
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4068 GTCTTGAAAAAGAAAAGAAAAGAAAAGAAAGAACCTCGGTTCTAGAACATTCAAGAGCATTCTAGATAGAGGTT 4141
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4142 TCTTAGCCTTGGGATCATTCTGTGCTGCTGCGGGCTATACCGGGCCCTACAGGATGCTGAGTGGCATCCCTGGC 4215
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4216 CTTCACCTACCCGATGCCCTGGCTCTCCACCCACAGCCTTCCCCACTGTGAAGGCCCACCCCCCAGGGCTTCCA 4289
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4290 CCATCCACTTCATTTCTTCTCAATATTGTTCTAAGCTTAGGAGAGTAGATATTTTTACAATAAAAATTAAGATG 4363
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4364 TGTTTTAACACCATTAGAATCTAATTGGCCCCCTTAGGATATCGGGACTATCTCCCTGAACATCGTCAAGGGGC 4437
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4438 TCTGTTGCTTGAACTACCTCAGAGCTGATAATTGGGAACCTTAAGAGCAGGGTTCCCCAACCCCTGGGCCACAT 4511
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4512 ACTGGTACTGGTCCATGGTCCATCAGGACCCGGGTCACACAGCAGGAGGGGCGTGGTGGGCAAGTGAGCATTAC 4585
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4586 GGCCTCAGCTCCACCTCCTGTCAGCTCAGCACAGCAGTAGATTCTCAGAGGAGCATGAGCCCTATCGTGAACTG 4659
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4660 TGCAAGTGAGGGATCTAGGTTTCACGCTCCTTATGAGAATCTAATTCCTGATGATCTGTTACCGTCTCCCATCA 4733
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4734 CCCCCAGATGGGACCGTCTAGTTGCAGGAAAACAAGCTCAGGGCTCCCACTGATTCTGAATTATGGTTCAGTGT 4807
Query 220 --------------------------------------------------------------- 219
Sbjct 4808 ATGATTCTTTCATTACATATTACAGTGTAATAATAATAGAAATAAAGTGTACAATCAATGTAA 4870
