Nucleotide Global Alignment
Description
- Query:
- TRCN0000478282
- Subject:
- XR_001753641.1
- Aligned Length:
- 4189
- Identities:
- 187
- Gaps:
- 3974
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 TTGAAGAGGCTGAGGGAGGCGGTGTCGCCGCCGCGGCGCTGTCATGGAGCTAGCGCAGGAAGCGCGGGAACTGG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GTTGCTGGGCGGTCGAAGAGATGGGGGTGCCCGTGGCGGCCCGGGCCCCGGAATCGACGCTGCGCAGGCTGTGT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CTGGGCCAGGGGGCTGACATCTGGGCCTACATCTTGCAGCATGTGCACAGTCAGAGGACTGTCAAGAAGATCCG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GGGAAACCTACTCTGGTATGGCCACCAGGACAGTCCACAGGTCCGTCGGAAGTTAGAGCTGGAAGCTGCTGTGA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CCCGCCTGCGGGCAGAAATCCAGGAACTCGACCAGAGCCTGGAGCTGATGGAGCGAGACACTGAGGCTCAGGAC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 ACGGCCATGGAGCAGGCACGTCAGCACACTCAAGACACCCAGCGTCGAGCTCTCCTCCTCCGGGCCCAAGCTGG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 GGCCATGCGAAGACAGCAGCATACGCTCCGAGATCCCATGCAGCGGCTGCAGAATCAACTGAGGCGCCTGCAGG 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 ACATGGAGAGGAAAGCCAAAGTAGATGTGACCTTTGGATCCCTCACGTCGGCAGCTCTGGGCCTGGAGCCCGTG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 GTCCTGCGTGATGTCCGAACAGCCTGCACCCTCCGGGCCCAGTTCCTGCAGAACCTCCTGCTTCCCCAGGCCAA 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 GAGGGGCAGCCTCCCAACCCCTCATGATGACCACTTTGGCACTTCGTACCAGCAGTGGCTGAGCTCAGTGGAGA 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 CGCTGCTGACAAACCACCCCCCAGGCCACGTCCTGGCTGCCTTGGAGCACCTGGCTGCAGAGCGGGAGGCAGAG 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 ATTCGGTCCCTGTGCAGTGGGGATGGGCTTGGCGACACAGAGATATCCAGACCCCAGGCCCCGGACCAGTCAGA 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 CTCCAGCCAGACCCTGCCGTCCATGGTTCATCTCATCCAGGAGGGCTGGCGGACTGTGGGTGTGCTGGTCTCCC 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 AGCGGAGCACCCTCCTGAAGGAGCGGCAAGTCTTGACCCAGCGCCTCCAGGGCCTGGTGGAGGAGGTGGAGAGA 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 CGCGTCCTGGGATCCAGTGAGAGGCAGGTGCTGATACTGGGGCTTCGGCGCTGTTGCCTGTGGACGGAGCTCAA 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 GGCCCTGCACGATCAGAGCCAGGAGCTGCAGGATGCAGCTGGGCATCGGCAGCTCCTGCTGAGGGAGCTACAGG 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 CCAAACAGCAGCGGATCCTGCACTGGCGCCAGCTGGTGGAGGAGACCCAGGAACAGGTCCGCCTGCTCATCAAG 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 GGAAACTCGGCCAGCAAGACCCGCCTGTGCCGGAGCCCGGGGGAGGTGCTAGCTCTGGTCCAGCGAAAGGTGGT 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 CCCTACATTTGAGGCAGTGGCACCACAGAGCCGGGAGCTGCTGCGCTGTCTGGAGGAGGAAGTCCGGCATTTGC 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 CCCACATTCTGTTGGGCACGCTGCTGCGGCACAGGCCGGGAGAGTTGAAGCCCCTGCCCACGGTCCTCCCATCC 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 ATCCACCAGCTGCACCCCGCGTCCCCAAGGGGCTCCAGCTTCATAGCGCTGAGCCACAAGCTGGGGCTGCCTCC 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 AGGGAAGGCCTCGGAGCTGCTCCTGCCGGCGGCTGCCTCTCTTCGCCAGGACCTTCTGCTCCTGCAGGACCAGC 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 GGAGCCTCTGGTGCTGGGATCTACTCCACATGAAGACCAGCCTGCCGCCAGGCCTTCCCACCCAGGTGCCCATT 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 GTGTGCTAAGGGCTTTAAACATTCTCCCTTGTTTCATCTGCACGGCAGTCCCATAAGAGCTGCTGCAGATCCAG 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 GCATCCCAGGAAAAACAGCAGAAAGAGAACCTGGGGCAGGCTCTGAAGAGGCTGGAGAAGCTACTGAAACAGGC 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 ACTGGAGCGAATCCCTGAGCTGCAGGGGATCGTGGGGGACTGGTGGGAGCAGCCAGGCCAGGCCGCCCTCTCTG 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 AGGAGCTCTGCCAGGGCCTGTCCCTGCCCCAGTGGCGGCTGCGCTGGGTTCAGGCCCAGGGGGCCCTGCAGAAG 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 CTGTGCAGCTGAAGAGAGGGTTCAAACGGAAGCCGAGAACTTGACACTGTTCACCCCAACACCTCACCTCCCCC 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 AGGACATTTGGAAGAAAGCAGCGCCAGGATTCCTCGGCAGTCGTCCCCACCCGCACCTGCAGTCCCCTCATGTG 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 CTGTTCTGCTGCCCCACTCAGCTCCTGGACCCTGTCCTTTCATCCCGCTAAAGCACCCCCTAAAACCCCTTCAT 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 CACTTTCATTCTCAGCAAAAAGTAATTGAGCACCTCCTCTAGGCGCTGGGGAGTCCACACTGAACAAAAGAAAC 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 AGAAAACCCTGTCTTCCAGCAGTTGAGTTCTAGGGCAGGGAGACAGAGTTTACAAGATAAGGAAAATATATATG 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 TAGTATGCTGCAAGTTAACTGCTGTGTGGGAAATCCAGCAGGGGGTGGGATGTGTGATTTGAATTGAGGGCCAC 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 ACTGCCCAGGTCGTGCTCCGTCAAGGGGTGAGCAGGAGCAACAGGGGTGGCTGAGTAAGGGCTTGCAGCTGGAG 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 GCAACAGCACATGCAAAGGCCCTGAGCCAGGATGTGCTGCAATAAGGGCCACTGAGGGGGACAGTGTAGGTTGG 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 GGGTGAGGAATGTATTAAAAGATGAGATTGCCTTCTAGTTTGTATAGTTTCTTTTTTTACATGTAAATCAGCCA 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 TTTGGAATTTATCCTAGCACATGGATCCAATTTTGTCTTATTTTACATATATCCTAGTAGCACTTACTGAAATT 2738
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2739 CCCAGTCAGAGTGGCAGTTGCCTCTGAGGGAAGGTGGGTGGCAGGGATCAACTGAGGAGGAGACACAGAAATGT 2812
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2813 CCTAGCTGATGGGAATGTGCTGTGTCAAGAGCAGCGGCGGTGACGCAGGTGTAGAGATTTGTCAGAGCTCATGT 2886
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2887 AGTTGTAGTCTTAAGGCCTGTGCATTTCACTGCGTGGGTTACTCAATTTATAAAGCAAAGCCCTTACACTTTTG 2960
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2961 AGATGCCACCTTTTTATGCACTAAATTTCCATGTTTAATTGGGTTATATCTGGCTTCTCTCCAGACCTGCTTTG 3034
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3035 TATTTAACTCTCCATGTGTCATTCCTACAGTAGCTTAATAGAAAGGCTTGTGACACATTGTCATATCTGTTCTT 3108
Query 1 ----------------------------------ATGGAGTCTCATTCTGTCGCCCAGACTGGAGTGAAGTGGC 40
|||.|||||||||||||.|||||...|||||||.||||||
Sbjct 3109 GTTTTCTTTTGTTTTTTTTTTTTTTTTTTTTGAGATGCAGTCTCATTCTGTTGCCCAAGTTGGAGTGCAGTGGC 3182
Query 41 ATGATCTCGGCTCACTGCAACCTCTGCCTCTCGAGG-TCAAGCGATTCTCCTGCCTCGGCCTCCGGAGTAGCTG 113
||||||||.|||||||||||||||.||||| |.||| ||||||.||||||.||||||.||.|||..|||||||.
Sbjct 3183 ATGATCTCAGCTCACTGCAACCTCCGCCTC-CCAGGTTCAAGCCATTCTCATGCCTCAGCTTCCCCAGTAGCTA 3255
Query 114 GGATTACAGGCACACGCAACCATGCCCGGCTAATTTTTTTTGTATTTTTAGTAGAGATGGGGTTTCACCATGTT 187
||||||||||.||.|.|.||||.||||.|||.| ||||||||.|||||||||.||.|||||||||.||||||
Sbjct 3256 GGATTACAGGTACGCACCACCACGCCCAGCTCA---TTTTTGTACTTTTAGTAGGGACGGGGTTTCATCATGTT 3326
Query 188 GGCCAGGCTGGTCTCGAACTCCTGACCTCAAG------------------------------------------ 219
||||||.|||||||||||||||||||||||||
Sbjct 3327 GGCCAGACTGGTCTCGAACTCCTGACCTCAAGTGATCTGCCTGCCTCGGCCTCCCAAAGTGCTGGGATTACAGG 3400
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3401 CATGAGCCACCGCGCCTGACCACATTGCCATATCTGAAATGGCTGGATTCTCTTAGGTGCTTTTCTTTTTCTTT 3474
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3475 CTTTCTTTCTTTTTTTGAGACAGAATCTGGCTGTTTCCCAGGCTGAAGTGCAGTGGCATGAACTCAGCTCACTG 3548
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3549 CAACCTCTGCCTCCTGGATTCAAACAATTCTCATGTCTCAGCCTCCTGAATAGCTGGGATTACAGGCACCCACC 3622
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3623 ACCATATCTGGCTAATATTTGTATTTTTTGTAGAGTCGGAGCTTTACCATGTTGGTCAGGCTGCTCTCCAACTC 3696
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3697 CTGGCCTCAAGTGATTCTATCGCCTCTGCCTCCCAAATCTTCACCTGCTGGGATTAGTTTCCCCTGTCTCAGTA 3770
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3771 AATTTTTTTTCCCAAACTAAGTGAACATTAGATTTAATTTGGCTGGCCCCAGAAGAAAAACATGCACAGATGGT 3844
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3845 AGTTTTACTGGTGTTGCAGTAAGTTTTCAAATTTGGAAGTTTGGCAGCTTTATGATCTTGAACCTTGCTGTCCA 3918
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3919 TCTCTCACACAACTCCTCTCTTGGCCTCCAGAGTCCCTTTACTCTCCCAGCTTTCCTCCTGCCCCTGGCTGCTG 3992
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3993 TTTCCCAGCCTTTCCACATTGGCTTTCCCATGTAGTCCTTAGTGTGTCTGCTCCTCCTCTCTCTCCTCATCACA 4066
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4067 GTTCCCAGCCCCCACCTTCAACTGAACTCAACAAAATCTTCAACTTCATACAGTAGTCACATTGTTAGTAATAA 4140
Query 220 --------------------------------------------- 219
Sbjct 4141 CACTGGCATTTTTATTTTGATAAAATAGACCGTTTAAATTTTTGA 4185
