Nucleotide Global Alignment

Description

Query:
TRCN0000478282
Subject:
XR_001754565.1
Aligned Length:
4293
Identities:
193
Gaps:
4075

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  CCGGGACTACGCTACCCAGCATCCTCGGCGCGGCCCGGAGGCTATGCGACCCTGCGCGTCGCATCCCCTCGGTG  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  GACTACACTCCCCAGAGTCCTCGGGAGTCGTCCAGGTACACGCCCCAGAATATTGGTCATAGCGGTCCACCCGG  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  GACTGCGCGACCCGGAATCCTTGGAAGGACTTCTCGGAAGGACTCCTCTCTGACAGGTGGGGCGAGCCTATGGT  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  CGTTTGGACGTGGAGGGATCCTTTCAGAACCGGCGATTTCTTTTATTTAGGTAGCCCTATACATACATTAAGCA  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  TATTTTCCCATTTCTATGATATAGACAACACCTTTTTGCTTTTCTTCCACATCTTCACACTCCTTCAGGATCAA  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  AAACCTAAGCCACATGACTGGATGAGCCGTCACTTGGCCTTCATTCGGGTAGTGATGGTCCTCACTGTAGTGGA  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  TGTTTTGCCTCCAGATATGCTTGAATCACTGCATTTTGGGAATAACTTCAAATGCAAGTCCTTGATCTAAATAA  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  ACAGAGTGACGAGGGGCCTATGTATCTATACCACCTGTCTCCTGAGTATACACCAGGCCAGCATAATCAGCCTC  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  AGCAACTTCTGGTTGGAAAGCTTTAAACATAAATTTACAAATAACATTGTCAGTGTCCTCTTTTTTCTTTTTTG  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  TTCCCTCAATTTGTCTTTCAGTAGTGACATAATATTCTTCACTGTGGCTTCTTCCATTGTGACCCAGACCAATC  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  TACTTAAGGTCCGCAAATACTGCTCACGTTCTCCCATGAAGTCCATCATGTGGGGAGTGTTTTCCTTGTAGGAT  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  TACGCTGCTCTCAAGTGCATACATGATGATCTTTTTGTCCAAGCATCAGAGGTGATCCCAGCATCTTCACAGTA  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  CCAGCCTTTCCCCAAGATCCTCGCCAGAGAAAAGGGTTACCCAGATCATCCTGCCACTGGTGAGTTGCTTTGTT  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  GTCATGTACTGGGTGGACCTTATCATCTCATCCTCTTCATCCCTGTTATGGACGTATAACCCAGTCATCCTGAG  1036

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1037  CATCTAGAACCTTGTAGCCTGTGTCTATGCCACTCTCGTTCCATTGGTACAAATCCGCTCTGATAAAAGAATAG  1110

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1111  TTAATATTCTCCAAAAAATGGAATTAAAGTGCTATAATTTTTTAATGTGTTGGTGATGAAAAATATTTCTAAAA  1184

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1185  ATTAGTCTCATTCTATAGTTAAATTGTTCAAGTAGCCCCAGATTTAGCTTACTGAGTTTAAATAAAATGCGTGG  1258

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1259  AATTACACTTTTATTATATTTTTATGCTTCTGAAACTGAGGCATCTAAGGACTATGTAGTTTCTTCAGTTCAAT  1332

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1333  GTTCACCATAGATTGACATTTCAGATATCAAGTCTTTTGCACTTTTATTTTTATGTTAACTTTGTACAAGAAAA  1406

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1407  TGTTTCTCTCTTTTTGAAGTACATTCTTAAAAAATTTGTTTTGGTAATCAAATCTCTCAATGTTTTTACTTTTG  1480

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1481  AAAATATTTACTTACTCTGTTTATGAATGATACTTTAGCTAAATATTCAATTCTAGCTTTTAAGCCATGCTTGC  1554

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1555  TCATTGTAACCTCCCTGACTAAAAAAAATTATGTCAATTTGGATTTTAAATTTAATCTAGAATTCATTTTAAAG  1628

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1629  GGTTTTAAATGAAATTTATATGTGGCTAGATACTGTTTTGGTAATACTCGATAGTTTCCCGCCTCTATTGGGAT  1702

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1703  ATTATTGACAAAAATTTTGTATATTTATGGTGCACAATATGATGTTTTGAGGTATAGACACGTGCACGCAGACA  1776

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1777  CATAAACACACACACACACACACATTGTAAAATTACCAAAATCAAGCTTAATAACATGTCAATTACTTCTCATA  1850

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1851  CAAGGGTATTTTTGGTGTATGGTGAGAACATTTGAGATCTACTTCATTAATATAATTTACTTATACAATACATA  1924

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1925  TTATTAATATAGTCTCTATGCTGTATACATATATTTATATTAACTTCTCTTTTGTTATTGTTGGAGACAGTTGT  1998

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1999  CTGTCTTTGTTCCCCAGGCTGGAGTGCAGTGGCATTATCATAGCTCACTGAAACGTCAAACTCCTGGGTTCAAA  2072

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2073  TCATTCTCCCACCTCAGCCTCAAAAGTAGCTAGAACTACAGGGGTGCACCACTATGCCAAGCTAATTTGTAGGA  2146

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2147  ACAGAGTCTTGCTATGTTACCCAGGCTGGTCTTGAACTCCTGGCCTCAAGCAATCCTCCTGCCTTAGCCTCCCA  2220

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2221  AAATACAGGGATTATAGGCATGAGCCACATGCCTAGCTTTATAACATTTTCTTTATTCATTTATGTGTTGATGG  2294

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2295  ACATTTACATTGTTTTCATATCTTGTCTATTGTGAATATTGCTTCAAGAAACATAGGAGTGAAGATATCTCTTC  2368

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2369  AATATGTGATTTTATGTTCTTTGGATATTTAACCATAGGTAGGATTCCTGAATCATATGATAGTTTTATTTTTA  2442

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2443  ATTTTTTGATGAATAATCATGCTGTTTTCCATAATGGCTTTACCAATTTACATTCCCAGTGACAGTGTACAAGG  2516

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2517  TTCCTTTTCTCTCCATCATTGATAACATTTGTTTTCTTTTGAATTTTTAATAAACATTACCCTAACATGTGCTT  2590

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2591  GAGGTGCTATCTCATTTTGGTTTTGATTTGCATTCTCCTGATGATTACTAATGGCTTCTTTGAAAAAGGATCCA  2664

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2665  TTTAGATTATTTGGCTACTTTTAAAAAGAATGTGTTATTTTTATTGTTATTTTTATTCAGAGGGGGTTATATTT  2738

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2739  TATGAATTTCTTACAGATTTTGAATGCTAACCCTTTATCTGATATTTGGCTTACAAGTATTTTTCTTCGGTTCT  2812

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2813  GTGGATTGCCTTTTAAATTGATTGACTGTCTTTTGCTATGCAGTAGAAACTTTTTAGTTTGATGTCGTTTCATT  2886

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2887  TTTTTTCTCCCTGGGCTTTTAGTGTCAAATACAAAAAATAATTATTGCCGCAAACAATGCCAAAGAATTTTCCC  2960

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2961  CAATGTTGTTTTCTAAAAGTTTTATGGTTTCAGGTCCAATATTGAAGTCTTTAATCTCTTAAGTTAATTTTTGT  3034

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3035  GTATTCTGTAAAAGATGGGTTAAATTTTTTTTGCATGTGTATATCCAGTTTTCCCATCACCATTTATTGAACAG  3108

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3109  TGTATTCTTTCTTCACTGTATATTTATATATCTTTGTTGAAAATTAGTTGACTGTGTTCAGATGGATATTTCTG  3182

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3183  AGCTCTCTATTCAGTTTCATTGGTCTATGTGTCTGTGTTAATGCCAGCATCATGCTGTTTTGATGACTGTAGCT  3256

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3257  TTGTTATATCATTTGAAATTAAGAAGTTTGATGCCTTCAGCTTTGTTCTTGCTCAAAATTCTTTGGTTATTTTG  3330

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3331  GGTCTTTTCTAATTCCTTACAAACTTTAGAAATTTTTTATTTTTCTGGAAAATGATATTTTAATTTTGATGGAG  3404

Query    1  --------------------------------ATGGAGTCTCATTCTGTC-------GCCCAGACTGGAGTGAA  35
                                            |||||||||||.|.||||       ||||||.||||||||.|
Sbjct 3405  ATTGCTTTAAATTTTTTTTTTTTTTTTTTGAGATGGAGTCTCACTGTGTCACCCAGGGCCCAGGCTGGAGTGCA  3478

Query   36  GTGGCATGATCTCGGCTCACTGCAACCTCTGCCTCTCGAGG-TCAAGCGATTCTCCTGCCTCGGCCTCCGGAGT  108
            |||...|||||||.|||||||||||||||..||| ||..|| ||||.|.||||.||||.|||.||||||.||||
Sbjct 3479  GTGAGGTGATCTCAGCTCACTGCAACCTCCACCT-TCCTGGTTCAAACAATTCCCCTGACTCAGCCTCCTGAGT  3551

Query  109  AGCTGGGATTACAGGCACACGCAACCATGCCCGGCTAATTTTTTT-TGTATTTTTAGTAGAGATGGGGTTTCAC  181
            |||||||||||||||..|||||.||||||||.||||||||||||| |||.||||||||||||||||||||||||
Sbjct 3552  AGCTGGGATTACAGGTGCACGCCACCATGCCTGGCTAATTTTTTTGTGTGTTTTTAGTAGAGATGGGGTTTCAC  3625

Query  182  CATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAAG------------------------------------  219
            ||||||||||||.||||||.||||||||||||||||||                                    
Sbjct 3626  CATGTTGGCCAGACTGGTCACGAACTCCTGACCTCAAGCAATCCACCCACCTCGGCCTCCCAAAGTGCTAGGAT  3699

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3700  TACAGGTGTGAGCCACTGCACCCGGTGAGATTGCTTTAAATCTTTATATCACTTTTAGTAGTATGAATGTTTTA  3773

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3774  ATATTAATTTATCCAATCCATGAACACTAAGTTTTTTTTGTCTCTTCTATAATTGCCTTTGCCACTATTTTAGA  3847

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3848  GTTTTTATTGTACAAATCTTTTACCGTCTTAGTTATAAGTATTATTTTTTATGTTATGGCATATGGAATTTTCT  3921

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3922  TAATTTTTCCCATATATTTTGTTGTAAGTGTATAGAAATGCAATTTATTGTTTTGTACATTGATATAGTATCCT  3995

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3996  GCAACATTGCTGAATTAGTTTATTAGTTTTAAAAGTTTTTTTCCTGTAATGATGAGCACACGGGACTGTGTTTA  4069

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 4070  CACACTCATTAATATTCTGTTAACATATCACAGTGCCTAAAAATGTGCTCTGTTGTATTTCTGCGGTGACCAAT  4143

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 4144  TTAATGGCATCTTTTAGTCCTAATTTTTTTTTCTTTTAAAATACTTTTGTCTGGTATTGTATAATGGTGTGTTA  4217

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 4218  CTTTTCAGTTGTGCTACACATTTATTTCCAGGCAGAGTTAGTCAAGCTTTCTAATAAAGTTATTTAATACCTTT  4291

Query  220  -  219
             
Sbjct 4292  A  4292

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