Nucleotide Global Alignment

Description

Query:
TRCN0000478282
Subject:
XR_001754566.1
Aligned Length:
3745
Identities:
193
Gaps:
3527

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  CCCTCGGTGGACTACACTCCCCAGAGTCCTCGGGAGTCGTCCAGGTACACGCCCCAGAATATTGGTCATAGCGG  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  TCCACCCGGGACTGCGCGACCCGGAATCCTTGGAAGGACTTCTCGGAAGGACTCCTCTCTGACAGTAGTGACAT  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  AATATTCTTCACTGTGGCTTCTTCCATTGTGACCCAGACCAATCTACTTAAGGTCCGCAAATACTGCTCACGTT  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  CTCCCATGAAGTCCATCATGTGGGGAGTGTTTTCCTTGTAGGATTACGCTGCTCTCAAGTGCATACATGATGAT  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  CTTTTTGTCCAAGCATCAGAGGTGATCCCAGCATCTTCACAGTACCAGCCTTTCCCCAAGATCCTCGCCAGAGA  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  AAAGGGTTACCCAGATCATCCTGCCACTGGTGAGTTGCTTTGTTGTCATGTACTGGGTGGACCTTATCATCTCA  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  TCCTCTTCATCCCTGTTATGGACGTATAACCCAGTCATCCTGAGCATCTAGAACCTTGTAGCCTGTGTCTATGC  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  CACTCTCGTTCCATTGGTACAAATCCGCTCTGATAAAAGAATAGTTAATATTCTCCAAAAAATGGAATTAAAGT  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  GCTATAATTTTTTAATGTGTTGGTGATGAAAAATATTTCTAAAAATTAGTCTCATTCTATAGTTAAATTGTTCA  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  AGTAGCCCCAGATTTAGCTTACTGAGTTTAAATAAAATGCGTGGAATTACACTTTTATTATATTTTTATGCTTC  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  TGAAACTGAGGCATCTAAGGACTATGTAGTTTCTTCAGTTCAATGTTCACCATAGATTGACATTTCAGATATCA  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  AGTCTTTTGCACTTTTATTTTTATGTTAACTTTGTACAAGAAAATGTTTCTCTCTTTTTGAAGTACATTCTTAA  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  AAAATTTGTTTTGGTAATCAAATCTCTCAATGTTTTTACTTTTGAAAATATTTACTTACTCTGTTTATGAATGA  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  TACTTTAGCTAAATATTCAATTCTAGCTTTTAAGCCATGCTTGCTCATTGTAACCTCCCTGACTAAAAAAAATT  1036

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1037  ATGTCAATTTGGATTTTAAATTTAATCTAGAATTCATTTTAAAGGGTTTTAAATGAAATTTATATGTGGCTAGA  1110

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1111  TACTGTTTTGGTAATACTCGATAGTTTCCCGCCTCTATTGGGATATTATTGACAAAAATTTTGTATATTTATGG  1184

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1185  TGCACAATATGATGTTTTGAGGTATAGACACGTGCACGCAGACACATAAACACACACACACACACACATTGTAA  1258

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1259  AATTACCAAAATCAAGCTTAATAACATGTCAATTACTTCTCATACAAGGGTATTTTTGGTGTATGGTGAGAACA  1332

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1333  TTTGAGATCTACTTCATTAATATAATTTACTTATACAATACATATTATTAATATAGTCTCTATGCTGTATACAT  1406

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1407  ATATTTATATTAACTTCTCTTTTGTTATTGTTGGAGACAGTTGTCTGTCTTTGTTCCCCAGGCTGGAGTGCAGT  1480

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1481  GGCATTATCATAGCTCACTGAAACGTCAAACTCCTGGGTTCAAATCATTCTCCCACCTCAGCCTCAAAAGTAGC  1554

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1555  TAGAACTACAGGGGTGCACCACTATGCCAAGCTAATTTGTAGGAACAGAGTCTTGCTATGTTACCCAGGCTGGT  1628

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1629  CTTGAACTCCTGGCCTCAAGCAATCCTCCTGCCTTAGCCTCCCAAAATACAGGGATTATAGGCATGAGCCACAT  1702

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1703  GCCTAGCTTTATAACATTTTCTTTATTCATTTATGTGTTGATGGACATTTACATTGTTTTCATATCTTGTCTAT  1776

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1777  TGTGAATATTGCTTCAAGAAACATAGGAGTGAAGATATCTCTTCAATATGTGATTTTATGTTCTTTGGATATTT  1850

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1851  AACCATAGGTAGGATTCCTGAATCATATGATAGTTTTATTTTTAATTTTTTGATGAATAATCATGCTGTTTTCC  1924

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1925  ATAATGGCTTTACCAATTTACATTCCCAGTGACAGTGTACAAGGTTCCTTTTCTCTCCATCATTGATAACATTT  1998

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1999  GTTTTCTTTTGAATTTTTAATAAACATTACCCTAACATGTGCTTGAGGTGCTATCTCATTTTGGTTTTGATTTG  2072

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2073  CATTCTCCTGATGATTACTAATGGCTTCTTTGAAAAAGGATCCATTTAGATTATTTGGCTACTTTTAAAAAGAA  2146

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2147  TGTGTTATTTTTATTGTTATTTTTATTCAGAGGGGGTTATATTTTATGAATTTCTTACAGATTTTGAATGCTAA  2220

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2221  CCCTTTATCTGATATTTGGCTTACAAGTATTTTTCTTCGGTTCTGTGGATTGCCTTTTAAATTGATTGACTGTC  2294

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2295  TTTTGCTATGCAGTAGAAACTTTTTAGTTTGATGTCGTTTCATTTTTTTTCTCCCTGGGCTTTTAGTGTCAAAT  2368

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2369  ACAAAAAATAATTATTGCCGCAAACAATGCCAAAGAATTTTCCCCAATGTTGTTTTCTAAAAGTTTTATGGTTT  2442

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2443  CAGGTCCAATATTGAAGTCTTTAATCTCTTAAGTTAATTTTTGTGTATTCTGTAAAAGATGGGTTAAATTTTTT  2516

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2517  TTGCATGTGTATATCCAGTTTTCCCATCACCATTTATTGAACAGTGTATTCTTTCTTCACTGTATATTTATATA  2590

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2591  TCTTTGTTGAAAATTAGTTGACTGTGTTCAGATGGATATTTCTGAGCTCTCTATTCAGTTTCATTGGTCTATGT  2664

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2665  GTCTGTGTTAATGCCAGCATCATGCTGTTTTGATGACTGTAGCTTTGTTATATCATTTGAAATTAAGAAGTTTG  2738

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2739  ATGCCTTCAGCTTTGTTCTTGCTCAAAATTCTTTGGTTATTTTGGGTCTTTTCTAATTCCTTACAAACTTTAGA  2812

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2813  AATTTTTTATTTTTCTGGAAAATGATATTTTAATTTTGATGGAGATTGCTTTAAATTTTTTTTTTTTTTTTTTG  2886

Query    1  --ATGGAGTCTCATTCTGTC-------GCCCAGACTGGAGTGAAGTGGCATGATCTCGGCTCACTGCAACCTCT  65
              |||||||||||.|.||||       ||||||.||||||||.||||...|||||||.|||||||||||||||.
Sbjct 2887  AGATGGAGTCTCACTGTGTCACCCAGGGCCCAGGCTGGAGTGCAGTGAGGTGATCTCAGCTCACTGCAACCTCC  2960

Query   66  GCCTCTCGAGG-TCAAGCGATTCTCCTGCCTCGGCCTCCGGAGTAGCTGGGATTACAGGCACACGCAACCATGC  138
            .||| ||..|| ||||.|.||||.||||.|||.||||||.|||||||||||||||||||..|||||.|||||||
Sbjct 2961  ACCT-TCCTGGTTCAAACAATTCCCCTGACTCAGCCTCCTGAGTAGCTGGGATTACAGGTGCACGCCACCATGC  3033

Query  139  CCGGCTAATTTTTTT-TGTATTTTTAGTAGAGATGGGGTTTCACCATGTTGGCCAGGCTGGTCTCGAACTCCTG  211
            |.||||||||||||| |||.||||||||||||||||||||||||||||||||||||.||||||.||||||||||
Sbjct 3034  CTGGCTAATTTTTTTGTGTGTTTTTAGTAGAGATGGGGTTTCACCATGTTGGCCAGACTGGTCACGAACTCCTG  3107

Query  212  ACCTCAAG------------------------------------------------------------------  219
            ||||||||                                                                  
Sbjct 3108  ACCTCAAGCAATCCACCCACCTCGGCCTCCCAAAGTGCTAGGATTACAGGTGTGAGCCACTGCACCCGGTGAGA  3181

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3182  TTGCTTTAAATCTTTATATCACTTTTAGTAGTATGAATGTTTTAATATTAATTTATCCAATCCATGAACACTAA  3255

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3256  GTTTTTTTTGTCTCTTCTATAATTGCCTTTGCCACTATTTTAGAGTTTTTATTGTACAAATCTTTTACCGTCTT  3329

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3330  AGTTATAAGTATTATTTTTTATGTTATGGCATATGGAATTTTCTTAATTTTTCCCATATATTTTGTTGTAAGTG  3403

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3404  TATAGAAATGCAATTTATTGTTTTGTACATTGATATAGTATCCTGCAACATTGCTGAATTAGTTTATTAGTTTT  3477

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3478  AAAAGTTTTTTTCCTGTAATGATGAGCACACGGGACTGTGTTTACACACTCATTAATATTCTGTTAACATATCA  3551

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3552  CAGTGCCTAAAAATGTGCTCTGTTGTATTTCTGCGGTGACCAATTTAATGGCATCTTTTAGTCCTAATTTTTTT  3625

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3626  TTCTTTTAAAATACTTTTGTCTGGTATTGTATAATGGTGTGTTACTTTTCAGTTGTGCTACACATTTATTTCCA  3699

Query  220  ---------------------------------------------  219
                                                         
Sbjct 3700  GGCAGAGTTAGTCAAGCTTTCTAATAAAGTTATTTAATACCTTTA  3744

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