Nucleotide Global Alignment
Description
- Query:
- TRCN0000478282
- Subject:
- XR_001755386.1
- Aligned Length:
- 5077
- Identities:
- 188
- Gaps:
- 4863
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 CTCTCCAGGGTGTCCAGGAGTCTCTCTGCTGCCAGCCCCGCCCAGACTCCAGGCAGGTTCTCGTTGCTATGGTG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 ATCGCCGGTGCAAGCTGGATGCTTGGACGCGCCGCTGCCAGTCCAACGCAGACCCCGCCCACGACGTCGACGAT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TCGTGTAGCCCGCAGGTCCCGCGTGGCTCTCGTTGCCATGGTGATCGCCGCCGCTGGCTCAGGCGGACCAGGCC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GCGCGGAGCCCCAGCTTTCACAGCCATCGCTGACTGGGAGCAGGAGACCCCTCCCCACTCTACTTCCACTGCCT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GAGCTGTGCCATGCCTCACAGCCCAGTAAGGACTGTGGAAGAATGAGGTCCTCCCTGACACCTTTGGGGCCCCC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TGTGAGCCGCGACCGTGTCATCGCCAGCTTCCCTAAGTGGTACACGCCGGAAGCCTGTTTGCAGCTCAGGGAGC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 ACTTCCACGGGCAGGTCAGCGCTGCCTGCCAACGCAGGAACACGGGGACTGTCGGGCTCAAACTCTCCAAGGTG 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GTGGTGGTTGGCGATCTCTACGTGGGGAAGACCAGCCTCATCCACAGGTTTTGCAAGAATGTTTTTGATCGAGA 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 CTACAAGGCCACCATTGGGGTGGACTTTGAAATTGAGCGCTTTGAGATTGCTGGGATTCCCTATAGCCTCCAGA 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 TTGATCATCACGGCCTTTGACCTCACTGACGTGCAGACCCTGGAGCATACCAGGCAGTGGTTGGAGGATGCTCT 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 GAGGGAGAACGAGGCAGGCTCCTGCTTCATCTTCCTCGTGGGAACCAAGAAGGACCTTCTGGCGAGAACGTGAA 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 GGCATTCTTCAGCCGCGTAGCCGCCCTGGCATTCGAGCAGTCGGTGCTGCAGGACCTGGAGAGGCAGAGCAGTG 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 CCCGGCTCCAGGTCGGCAATGGAGACCTAATCCAAATGGAAGGGAGTCCGCCCGAGACCCAGGAGAGCAAGAGG 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 CCCTCCAGCCTGGGCTGCTGCTAACTGGGGCCTGCGTGGAAGGCCTCCGCTCCCTGCACACACACGGACAGGAA 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 TTTCCGTGACTGTGGTGTGGAGACTGGAGCCCAAGCTCTGCAGCGTGTCGCCCTCAAGCTGTAGGCCCATGTTC 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 CAGTCCCTCCACCCACCCACCGGGCTCAGCTCCAGGGCACAGTCACTTGTCCGTTGCAGGTTGGGCACTAGAAA 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 AGGCCCCCACTGGCTGCCTGGGAGCCCCACACCACCGGGCCAGTGCAGGCACTGTGGTGATCCCATAAAAGGCC 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 AGTCCATTTGCAGGGTCATCAGACAGTCACCTTTGGCCTCAAGAGGCCTCAGAACTGCAAACTCCTGCGTCGGT 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 CTATACTACTCGGCCATGGCCCACATCAGCAGTCAACCCTGCACTCTTTCCCAGCGATCTTGGATGTGTCCCCA 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 GGATCCGTCACAGTGTTCCAGGCAACCTGGACTTGTCAAAGTCAGCACCTGAAGGAGAGGCCACCTGCCATTCC 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 CCCTGGGAGTTTTCTGTTGTCAGCAGGACTTATGGTTCTGGGTCTCAGAGCTTCAGGCCTCACTGTCCTTCTGC 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 CACGGATGCTCAAGGTTCCTGGGCAGACCAGCACCTCTGGAGGACAATGGACAAAATGTCTCTTAGACCTGTTC 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 TGGCTGAAGGGCTATCTCTGGCACCTCTGAGATCCCTAGGTCCTGCCCTCCTGGTCCGTGGGCCAGGATGTGCA 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 GAACAACCACTCAGGCCTTTCTGGCCCACCTGGACAGTGCATTTACCTGTGTGCTGCGGGAGGCAGACTGCACA 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 GCTGTCCTAGGGTAACTCACTCTGCAGCCCTTGAACATGGCACTGCCCTCCTCTGGCACTCATGCTGGGCCTGT 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 GCCCACTGCTGCCTCTCCATCCCTCTCTCATTGGCCTATACATCTCTTAGGACCTTTGTAATGGTGTCCATGCA 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 CCTTTAGAGGACTTCAGAGGCCCTGCCAAGTCTAGCATGTTCCTGTCTCCAACACCGCCTCCTGCACATGCAGA 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 GCAGACAGAAATACCCCACACATTCCCCAGCCTCTCTGCCCAGTATGCTCATCCACAGGGTTTTCTCACTGCTA 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 TGAACCAGCCCCACAGCCCCAGGCCCCTGTCACCTGGCTATGCCCACTCATCCCACCCGTCTCGTGCTGTTGCT 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 TCCCGTAGATGGCGAGCACCTTGCAGGCAGCCTTCTGATCAGTACTGCTCTCCTAGGGCCTGGCACACTGCAGC 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 TGCCCTGTAAATGTTCAGCTCAGCGATTGCCAAATACCAGTTAGGGAAGAACACTGGCATCTTTTTCTATTCAT 2294
Query 1 -----------------------------------------------------------ATGGAGTCTCATTC- 14
|||||||.|||..|
Sbjct 2295 TCCCCCTTCAACATATTTTTTGTAGTTTTTTATATAAATGACTTTTTTTTTTTTTTGAGATGGAGTTTCACCCT 2368
Query 15 TGTCGCCCAGACTGGAGTGAAGTGGCATGATCTCGGCTCACTGCAACCTCTGCCTCTCGAGG-TCAAGCGATTC 87
|||.||||||.||||||||.|.||||.|.|||||||||||.||||||||||||||| |.||| |.|||||||||
Sbjct 2369 TGTTGCCCAGGCTGGAGTGCAATGGCGTAATCTCGGCTCAGTGCAACCTCTGCCTC-CCAGGTTGAAGCGATTC 2441
Query 88 TCCTGCCTCGGCCTCCGGAGTAGCTGGGATTACAGGCACACGCAACCATGCCCGGCTAATTTTTTTTGTATTTT 161
|||||||||.||||||..||||||||||||||||||||..|.|.||||||||.|||||| |||||||||||
Sbjct 2442 TCCTGCCTCAGCCTCCCAAGTAGCTGGGATTACAGGCATGCACCACCATGCCTGGCTAA----TTTTGTATTTT 2511
Query 162 TAGTAGAGATGGGGTTTCACCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAAG---------------- 219
||||||||||||||||||.|||||||||.|||||||.|||||.||||||||.||||.|
Sbjct 2512 TAGTAGAGATGGGGTTTCTCCATGTTGGTCAGGCTGCTCTCGGACTCCTGATCTCAGGTGACCTGCCCACCTCG 2585
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2586 GCCTCCCGAAGTGCTGGGATTACAAGGGTGAGCCACCATGCCCGGCCATAAATGATTTTATTCATTTTTATGTT 2659
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2660 TTCTTTTGGGCGGCGGGATGGAGTCTCTGTCACCCAGGCTGGCGTGCAATGGCACGATCTTGGCTCACTGCAAG 2733
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2734 CTTCCCCTTCCGGGTTCATGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCACGTGTGACCA 2807
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2808 TGCCGGGCTAATTTTTTATATTTTTAGTAGAGAGAGGTTTCACCGTGTTAGCCAGGATGGTCTCGATGATCTGA 2881
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2882 CCTCGTGATCTGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCCTGAGCCACCGCGTCCGGCCTCCATA 2955
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2956 AATGACTTTTAAAGGGGTTGTATGTTTAGTGTGAACAAAGACAGTACAAAGCATATAAAATACAAGGTGAAAGC 3029
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3030 CCCCCCCCCGCCACATTAGCTGCGCCCCTGAAGTGTCTCCAGCAGAAGAGATGGATGAATGGAAGGACACACAG 3103
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3104 ATGGACAGAGAGCAGGAAAGACTGTTAGCTCTGCTAACAGTCAGGACTATTCCTTCTGGACTCTGTGCCTTTGC 3177
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3178 CTGCACAGCTAGTGTTGATGGCTTGTTTGTTGTTTTCACCAGAGTGAGCTCCTTCTGGACATACTGCCTGGCAG 3251
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3252 CCTGCCTTCCTAGGGAGCTGGCGCCAAGGCCTCTCCCTGATGGCACACAAGGAGCCTCCTTCCTGTAGCAGCGC 3325
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3326 CCAGTTTTCATGTGGATGGATTGTAGTTCATTTGACCCTCCCCATCCGCGGGCCATCCGGCTTGTGTCCAGCTT 3399
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3400 TTAGCTCTTGCCAATGGTGCTGCAGTGGCCATTCTTGTAGTTATAGCTTTGCGTACTCAGGAAGGCCCTTCTCC 3473
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3474 CGACTGCGGCCCCCAGCCTGGTCCACTAAATGCAGCCTGTGGTCGGGCAGACAGCATTGGGGTCCATTAGGAAG 3547
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3548 ACCAGGTTTGCTGGGCATAAGCTTCACAGGACGGGAGAACCTGCCCATGGTGGACTGTCGTTCTCCACAGCTCC 3621
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3622 CTTCCCTTGCCCCTTCGGGCCTCCAGGATATGTTTGCGGGGGTGGGTGTGGTGTCCAGCTGTTACCAGCTTCTG 3695
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3696 AGCTAGAGCTGTACTGCCTCACGTACACCCCCACCTCTGTAAATGGTCCTTGATTAAATCGTCCTCATATTACC 3769
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3770 TCCTGCAATGTGCCAGCTGATTCCCACACACCCTGACTGACATAGTTGTGGCCTCTCGAACTTTGATATTTGGC 3843
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3844 CTGGGAGGACAGAAGAGTAAGGTCGCCACGGAAACGCAAGGGGCTCAGTTGTCCCCCCACCCCAAGTTGATGCA 3917
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3918 GCATCTTCTCGGTCAGAATTGCTTCAGGGTGGTTTGCGCACCCTCACTTTGATGATTTAATGAAGACATTTCCT 3991
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3992 TCTTTCCCAGCATCGGGCAGTAAGTTTCCTGGGCAGAGGCACTTTCTGTTGGTCTGGTCTTGTGGGCCCAGGCA 4065
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4066 AGCAGCCCCCTGCAGCCAAGGTGCGGCAATGACCACAGTGACCGCGTCCAAGTGCTGCCGAAACGCCTTTTTCC 4139
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4140 TCTTCCCTGTTTCCCTGGACCCTTTCCTGCTCTCTGTCCATCTGTGTGTCCTTCCGTTCACCTGTCTCTTCTGC 4213
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4214 TGGAGACACGTACCTGAAGCAGGTCCTCTCCTGTCACTTCCTGGCTCCCCAGGGCTAGGTCCCAGGGTGCTCTC 4287
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4288 GCTCTGGCTTTCGAGGCTCCTCACCACCCAGCCCACCCCACCCCCACAGGCCCCTGTGCTCCAGTTTCATCCCT 4361
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4362 GGTCACAATGCAGTCTGCAGATGCCAGACCCCTCTTCTGTGCCCAACGGCTGGGACACCCCTACTCCCAGAGAG 4435
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4436 GCCTCTGTGGACACCCCCACAGCTCTCGCAGCACTTGATACCTTGAGTGTGATTGGTCACATCTGGGCTTTCTC 4509
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4510 CCCCACCCATCTGTGGAACCCCAAGAGCCAGGACAGTGACCTCATCACCTCTACTGTCTCCCCTAGCACCTCTG 4583
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4584 GGAGGAAGGGCCCACAGTAGGTGCTCAATAGATGTGTAAAGAAGGCAGGGAAGCAAGAAGGTTGCTCAAACAAG 4657
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4658 ACCATGTTCCCAGCAGACAGATTGCACTCTGACCCAGATGCCACCACACGAAACTTACACCTGCCTGGGGAACA 4731
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4732 ATCCTGTGCTTGGCTCTCCTTGGTGGCCAGGGACAGTTGTGCCTCATCCCTCACTTGCAAACCCCAGTCCTGTC 4805
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4806 TGACCCAGAGACCCTCACAGGGCATCAGCCAGTGAAGGCGGTTTGGGGCTGGAGGATATGTTCTGATCTTGGGA 4879
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4880 AGAGCTTGGTAGGAGCCAGCCACAGAAAGTTTCAGGGCAGAACTGAACAGGTCTCGGGAAGGACACTTCATGCC 4953
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4954 AGCTAGAGAGGCTCTGGGCACAGGAAAGAATTGGACTTCGGGCAGAAAAATGTTTGTGCTATTTAGTACTATGT 5027
Query 220 --------------------------------------------- 219
Sbjct 5028 AACAAATCACTCCAAAACTTCATTGCTTAAAGCAACAAGCATGTA 5072
