Nucleotide Global Alignment

Description

Query:
TRCN0000478282
Subject:
XR_001755387.1
Aligned Length:
5091
Identities:
188
Gaps:
4877

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  CAGGGTGTCCAGGAGTCTCTCTGCTGCCAGCCCCGCCCAGACTCCAGGCAGGTTCTCGTTGCTATGGTGATCGC  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  CGGTGCAAGCTGGATGCTTGGACGCGCCGCTGCCAGTCCAACGCAGACCCCGCCCACGACGTCGACGATTCGTG  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  TAGCCCGCAGGTCCCGCGTGGCTCTCGTTGCCATGGTGATCGCCGCCGCTGGCTCAGGCGGACCAGGCCGCGCG  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  GAGCCCCAGCTTTCACAGCCATCGCTGGACTGTGGAAGAATGAGGTCCTCCCTGACACCTTTGGGGCCCCCTGT  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  GAGCCGCGACCGTGTCATCGCCAGCTTCCCTAAGTGGTACACGCCGGAAGCCTGTTTGCAGCTCAGGGAGCACT  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  TCCACGGGCAGGTCAGCGCTGCCTGCCAACGCAGGAACACGGGGACTGTCGGGCTCAAACTCTCCAAGGTGGTG  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  GTGGTTGGCGATCTCTACGTGGGGAAGACCAGCCTCATCCACAGGTTTTGCAAGAATGTTTTTGATCGAGACTA  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  CAAGGCCACCATTGGGGTGGACTTTGAAATTGAGCGCTTTGAGATTGCTGGGATTCCCTATAGCCTCCAGATTG  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  ATCATCACGGCCTTTGACCTCACTGACGTGCAGACCCTGGAGCATACCAGGCAGTGGTTGGAGGATGCTCTGAG  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  GGAGAACGAGGCAGGCTCCTGCTTCATCTTCCTCGTGGGAACCAAGAAGGACCTTCTGTCAGGGGCCGCATGTG  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  AGCAGGCCGAAGCAGACGCTGTGCACCTGGCCAGGGAGATGCAGGCCGAGTACTGGTCAGTGTCGGCCAAGACT  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  GGCGAGAACGTGAAGGCATTCTTCAGCCGCGTAGCCGCCCTGGCATTCGAGCAGTCGGTGCTGCAGGACCTGGA  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  GAGGCAGAGCAGTGCCCGGCTCCAGGTCGGCAATGGAGACCTAATCCAAATGGAAGGGAGTCCGCCCGAGACCC  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  AGGAGAGCAAGAGGCCCTCCAGCCTGGGCTGCTGCTAACTGGGGCCTGCGTGGAAGGCCTCCGCTCCCTGCACA  1036

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1037  CACACGGACAGGAATTTCCGTGACTGTGGTGTGGAGACTGGAGCCCAAGCTCTGCAGCGTGTCGCCCTCAAGCT  1110

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1111  GTAGGCCCATGTTCCAGTCCCTCCACCCACCCACCGGGCTCAGCTCCAGGGCACAGTCACTTGTCCGTTGCAGG  1184

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1185  TTGGGCACTAGAAAAGGCCCCCACTGGCTGCCTGGGAGCCCCACACCACCGGGCCAGTGCAGGCACTGTGGTGA  1258

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1259  TCCCATAAAAGGCCAGTCCATTTGCAGGGTCATCAGACAGTCACCTTTGGCCTCAAGAGGCCTCAGAACTGCAA  1332

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1333  ACTCCTGCGTCGGTCTATACTACTCGGCCATGGCCCACATCAGCAGTCAACCCTGCACTCTTTCCCAGCGATCT  1406

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1407  TGGATGTGTCCCCAGGATCCGTCACAGTGTTCCAGGCAACCTGGACTTGTCAAAGTCAGCACCTGAAGGAGAGG  1480

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1481  CCACCTGCCATTCCCCCTGGGAGTTTTCTGTTGTCAGCAGGACTTATGGTTCTGGGTCTCAGAGCTTCAGGCCT  1554

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1555  CACTGTCCTTCTGCCACGGATGCTCAAGGTTCCTGGGCAGACCAGCACCTCTGGAGGACAATGGACAAAATGTC  1628

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1629  TCTTAGACCTGTTCTGGCTGAAGGGCTATCTCTGGCACCTCTGAGATCCCTAGGTCCTGCCCTCCTGGTCCGTG  1702

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1703  GGCCAGGATGTGCAGAACAACCACTCAGGCCTTTCTGGCCCACCTGGACAGTGCATTTACCTGTGTGCTGCGGG  1776

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1777  AGGCAGACTGCACAGCTGTCCTAGGGTAACTCACTCTGCAGCCCTTGAACATGGCACTGCCCTCCTCTGGCACT  1850

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1851  CATGCTGGGCCTGTGCCCACTGCTGCCTCTCCATCCCTCTCTCATTGGCCTATACATCTCTTAGGACCTTTGTA  1924

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1925  ATGGTGTCCATGCACCTTTAGAGGACTTCAGAGGCCCTGCCAAGTCTAGCATGTTCCTGTCTCCAACACCGCCT  1998

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1999  CCTGCACATGCAGAGCAGACAGAAATACCCCACACATTCCCCAGCCTCTCTGCCCAGTATGCTCATCCACAGGG  2072

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2073  TTTTCTCACTGCTATGAACCAGCCCCACAGCCCCAGGCCCCTGTCACCTGGCTATGCCCACTCATCCCACCCGT  2146

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2147  CTCGTGCTGTTGCTTCCCGTAGATGGCGAGCACCTTGCAGGCAGCCTTCTGATCAGTACTGCTCTCCTAGGGCC  2220

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2221  TGGCACACTGCAGCTGCCCTGTAAATGTTCAGCTCAGCGATTGCCAAATACCAGTTAGGGAAGAACACTGGCAT  2294

Query    1  -------------------------------------------------------------------------A  1
                                                                                     |
Sbjct 2295  CTTTTTCTATTCATTCCCCCTTCAACATATTTTTTGTAGTTTTTTATATAAATGACTTTTTTTTTTTTTTGAGA  2368

Query    2  TGGAGTCTCATTC-TGTCGCCCAGACTGGAGTGAAGTGGCATGATCTCGGCTCACTGCAACCTCTGCCTCTCGA  74
            ||||||.|||..| |||.||||||.||||||||.|.||||.|.|||||||||||.||||||||||||||| |.|
Sbjct 2369  TGGAGTTTCACCCTTGTTGCCCAGGCTGGAGTGCAATGGCGTAATCTCGGCTCAGTGCAACCTCTGCCTC-CCA  2441

Query   75  GG-TCAAGCGATTCTCCTGCCTCGGCCTCCGGAGTAGCTGGGATTACAGGCACACGCAACCATGCCCGGCTAAT  147
            || |.||||||||||||||||||.||||||..||||||||||||||||||||..|.|.||||||||.|||||| 
Sbjct 2442  GGTTGAAGCGATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGATTACAGGCATGCACCACCATGCCTGGCTAA-  2514

Query  148  TTTTTTTGTATTTTTAGTAGAGATGGGGTTTCACCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAAG--  219
               |||||||||||||||||||||||||||||.|||||||||.|||||||.|||||.||||||||.||||.|  
Sbjct 2515  ---TTTTGTATTTTTAGTAGAGATGGGGTTTCTCCATGTTGGTCAGGCTGCTCTCGGACTCCTGATCTCAGGTG  2585

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2586  ACCTGCCCACCTCGGCCTCCCGAAGTGCTGGGATTACAAGGGTGAGCCACCATGCCCGGCCATAAATGATTTTA  2659

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2660  TTCATTTTTATGTTTTCTTTTGGGCGGCGGGATGGAGTCTCTGTCACCCAGGCTGGCGTGCAATGGCACGATCT  2733

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2734  TGGCTCACTGCAAGCTTCCCCTTCCGGGTTCATGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACA  2807

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2808  GGCACGTGTGACCATGCCGGGCTAATTTTTTATATTTTTAGTAGAGAGAGGTTTCACCGTGTTAGCCAGGATGG  2881

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2882  TCTCGATGATCTGACCTCGTGATCTGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCCTGAGCCACCGC  2955

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2956  GTCCGGCCTCCATAAATGACTTTTAAAGGGGTTGTATGTTTAGTGTGAACAAAGACAGTACAAAGCATATAAAA  3029

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3030  TACAAGGTGAAAGCCCCCCCCCCGCCACATTAGCTGCGCCCCTGAAGTGTCTCCAGCAGAAGAGATGGATGAAT  3103

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3104  GGAAGGACACACAGATGGACAGAGAGCAGGAAAGACTGTTAGCTCTGCTAACAGTCAGGACTATTCCTTCTGGA  3177

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3178  CTCTGTGCCTTTGCCTGCACAGCTAGTGTTGATGGCTTGTTTGTTGTTTTCACCAGAGTGAGCTCCTTCTGGAC  3251

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3252  ATACTGCCTGGCAGCCTGCCTTCCTAGGGAGCTGGCGCCAAGGCCTCTCCCTGATGGCACACAAGGAGCCTCCT  3325

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3326  TCCTGTAGCAGCGCCCAGTTTTCATGTGGATGGATTGTAGTTCATTTGACCCTCCCCATCCGCGGGCCATCCGG  3399

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3400  CTTGTGTCCAGCTTTTAGCTCTTGCCAATGGTGCTGCAGTGGCCATTCTTGTAGTTATAGCTTTGCGTACTCAG  3473

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3474  GAAGGCCCTTCTCCCGACTGCGGCCCCCAGCCTGGTCCACTAAATGCAGCCTGTGGTCGGGCAGACAGCATTGG  3547

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3548  GGTCCATTAGGAAGACCAGGTTTGCTGGGCATAAGCTTCACAGGACGGGAGAACCTGCCCATGGTGGACTGTCG  3621

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3622  TTCTCCACAGCTCCCTTCCCTTGCCCCTTCGGGCCTCCAGGATATGTTTGCGGGGGTGGGTGTGGTGTCCAGCT  3695

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3696  GTTACCAGCTTCTGAGCTAGAGCTGTACTGCCTCACGTACACCCCCACCTCTGTAAATGGTCCTTGATTAAATC  3769

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3770  GTCCTCATATTACCTCCTGCAATGTGCCAGCTGATTCCCACACACCCTGACTGACATAGTTGTGGCCTCTCGAA  3843

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3844  CTTTGATATTTGGCCTGGGAGGACAGAAGAGTAAGGTCGCCACGGAAACGCAAGGGGCTCAGTTGTCCCCCCAC  3917

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3918  CCCAAGTTGATGCAGCATCTTCTCGGTCAGAATTGCTTCAGGGTGGTTTGCGCACCCTCACTTTGATGATTTAA  3991

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3992  TGAAGACATTTCCTTCTTTCCCAGCATCGGGCAGTAAGTTTCCTGGGCAGAGGCACTTTCTGTTGGTCTGGTCT  4065

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 4066  TGTGGGCCCAGGCAAGCAGCCCCCTGCAGCCAAGGTGCGGCAATGACCACAGTGACCGCGTCCAAGTGCTGCCG  4139

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 4140  AAACGCCTTTTTCCTCTTCCCTGTTTCCCTGGACCCTTTCCTGCTCTCTGTCCATCTGTGTGTCCTTCCGTTCA  4213

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 4214  CCTGTCTCTTCTGCTGGAGACACGTACCTGAAGCAGGTCCTCTCCTGTCACTTCCTGGCTCCCCAGGGCTAGGT  4287

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 4288  CCCAGGGTGCTCTCGCTCTGGCTTTCGAGGCTCCTCACCACCCAGCCCACCCCACCCCCACAGGCCCCTGTGCT  4361

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 4362  CCAGTTTCATCCCTGGTCACAATGCAGTCTGCAGATGCCAGACCCCTCTTCTGTGCCCAACGGCTGGGACACCC  4435

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 4436  CTACTCCCAGAGAGGCCTCTGTGGACACCCCCACAGCTCTCGCAGCACTTGATACCTTGAGTGTGATTGGTCAC  4509

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 4510  ATCTGGGCTTTCTCCCCCACCCATCTGTGGAACCCCAAGAGCCAGGACAGTGACCTCATCACCTCTACTGTCTC  4583

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 4584  CCCTAGCACCTCTGGGAGGAAGGGCCCACAGTAGGTGCTCAATAGATGTGTAAAGAAGGCAGGGAAGCAAGAAG  4657

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 4658  GTTGCTCAAACAAGACCATGTTCCCAGCAGACAGATTGCACTCTGACCCAGATGCCACCACACGAAACTTACAC  4731

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 4732  CTGCCTGGGGAACAATCCTGTGCTTGGCTCTCCTTGGTGGCCAGGGACAGTTGTGCCTCATCCCTCACTTGCAA  4805

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 4806  ACCCCAGTCCTGTCTGACCCAGAGACCCTCACAGGGCATCAGCCAGTGAAGGCGGTTTGGGGCTGGAGGATATG  4879

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 4880  TTCTGATCTTGGGAAGAGCTTGGTAGGAGCCAGCCACAGAAAGTTTCAGGGCAGAACTGAACAGGTCTCGGGAA  4953

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 4954  GGACACTTCATGCCAGCTAGAGAGGCTCTGGGCACAGGAAAGAATTGGACTTCGGGCAGAAAAATGTTTGTGCT  5027

Query  220  -----------------------------------------------------------  219
                                                                       
Sbjct 5028  ATTTAGTACTATGTAACAAATCACTCCAAAACTTCATTGCTTAAAGCAACAAGCATGTA  5086

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