Nucleotide Global Alignment
Description
- Query:
- TRCN0000478282
- Subject:
- XR_001756629.2
- Aligned Length:
- 4382
- Identities:
- 187
- Gaps:
- 4172
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 CTAAAAATAATAAATGAATAAAATAAATATATAAATAAAAATTTGACCGACAGCTTAGTAAGGATTATATAGTT 74
Query 1 ------------------------------------------------ATGGAGTCTCATTCTGTCGCCCAGAC 26
||.||||||.|.|||||.||||||||
Sbjct 75 ATGTCTGCTACTGTTTAAAAAGGCTTTTCTTTTTTTTTTTTCTTTGACATAGAGTCTTACTCTGTTGCCCAGAC 148
Query 27 TGGAGTGAAGTGGCATGATCTCGGCTCACTGCAACCTCTGCCTCTCGAGGTCAAGCGATTCTCCTGCCTCGGCC 100
|.|||||.|||||||.|||||.||||||||||||||||..||||..|.|.||||||.||||||.||||||.|||
Sbjct 149 TAGAGTGCAGTGGCACGATCTTGGCTCACTGCAACCTCCACCTCCTGGGTTCAAGCAATTCTCATGCCTCAGCC 222
Query 101 TCCGGAGTAGCTGGGATTACAG------GCACACGCAACCATGCCCGGCTAATTTTTTTTGTATTTTTAGTAGA 168
|||..||||||||||||||||| || ||| ||..||| |||||||||||| |||||||||||||
Sbjct 223 TCCCAAGTAGCTGGGATTACAGATGTGTGC-CAC-CACACAT----GGCTAATTTTTT---TATTTTTAGTAGA 287
Query 169 GATGGGGTTTCACCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAAG----------------------- 219
|||||||||||||||||||||||||||||||||||||||||||..||||||
Sbjct 288 GATGGGGTTTCACCATGTTGGCCAGGCTGGTCTCGAACTCCTGGGCTCAAGTGATCTGACTGCCTCAGCCTCCC 361
Query 220 -------------------------------------------------------------------------- 219
Sbjct 362 AAAGTGGTGCTATTACAGGTGTGAGCCACCTCGCCTGACCTAAAAACACTTTTCAGCTCCAATTTTAAACTTAA 435
Query 220 -------------------------------------------------------------------------- 219
Sbjct 436 AATTTTTCTTATTTTAAAAACAACATATGCATGTATTATCAAATACAGGAAAATATGAAGAGACAGAAGTACTT 509
Query 220 -------------------------------------------------------------------------- 219
Sbjct 510 ACTGATCATAATCCTACCACCAGAGACATCACTATGAATATGTTTGTACATTTTTTTCCTGTGCATTCTAAAAC 583
Query 220 -------------------------------------------------------------------------- 219
Sbjct 584 ATAGTTAAGATTATGCTAAATATACAGTTCTCATGCTCTTTTATGTCAGAAGTGTTTTCCCATGACATTTTAAA 657
Query 220 -------------------------------------------------------------------------- 219
Sbjct 658 CCCCATAGACATAATTTTCTAATGGCTACATACTATTCTATCTAACCATTTCCAGAGGTTGGATATTTATCCAG 731
Query 220 -------------------------------------------------------------------------- 219
Sbjct 732 CTTCTGAGACTTCCTGTTATAAACAACACTTTGATGAACATCTTGGTACATAAATCTTTTGCATGTGACTACTT 805
Query 220 -------------------------------------------------------------------------- 219
Sbjct 806 CCTTAGGACAGATTCCTAGAAGTGAAATTCTGGGTCAAAGAGTAGTAATATTTTAAAGGCTGTTTATGCATACT 879
Query 220 -------------------------------------------------------------------------- 219
Sbjct 880 GACAAGCTGCTTCCTGGCAATTTGTCCAAACTTTTACTCTGACTAGCATTGTATGGGAGCTTCCCTGAGTGAAT 953
Query 220 -------------------------------------------------------------------------- 219
Sbjct 954 GCTGCCTTTGAAGTGGGGTCAGAGACTGAGGACCAAGGGGCACAGAGAAAGAAGAGTGTGGTCCTCGATGGGAG 1027
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1028 GACCCATCACAAACCGTCTTGCACAGTGTAAACCCAGGAGAGGGGCTGAAGAAACCACTGCAGCCCGGGGCCGC 1101
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1102 CCATTCTACCTGGCCCATGGTAGGCACTCAAGAAATGGTTTGCTACGTGAATAAACAAATCCACAAACATATAT 1175
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1176 TTCTGAATTCCTATCATGCGTCAAACACAAGAGATAGGGAGAGAGGAGGAAAAGAAAAGCAAGGGATCATGGGA 1249
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1250 TAAAAGGGGACAGTGGCAGTGGGGTGGACAGAAGTCAGAACTAAATTTACCTCATGCTTTAATTCGGCGAGTTT 1323
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1324 TCTTAGAATAGTCTGACCATTGCTTACGTTGAGGGTCTATAGTCCTCCCTTCCCCACAAGACAAAGTCCAACCT 1397
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1398 AATTCAGCACCAAGATCCAAGCAGCTCGGAAGATACAGGAGGGAAAAATCTGGTGTAGATTAAGTGCCACCCCC 1471
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1472 CAGCAATGGCCAGGACACAGCAGCAATGTTACCTAAGAAAGCAACTGCGCCTCTTGCTGATCAGCTAGACATGA 1545
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1546 GGGCAGTGTCCTACCTCAGCGGTTTGCAGCGGACATGCTGTCAGGCCATTGGGATAGTTCCCATAAGCCACTCC 1619
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1620 TGGTTGTCACCACTATTCCAAGTGGGCAGGAGCAGCCTTATTGACTGAGATGGGCGGCTATGGACACACATGGG 1693
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1694 TGTACGCATGTGATGGAAATGGGGGCTTGGGGCCCTGAGGGTCCACAGGGGCTGCGTGGTCAGGGAGGGTGGGC 1767
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1768 ATGGCATCACAGGCACCCCAGGGGAGAAGCTGGCTTTCTTCCCATACTTTTGGCACTGTTTTCTGTTTTGTTTG 1841
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1842 CCTTCAAAGAGCAAGTGATGGCTGGACAGCAAAGAGGAGTGGAGGCCGGGAGAATGGGCAGCTAGCCCAGCGCT 1915
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1916 CTCCAATATCTGGGAGTCGACCGCACTCCTGCACTCCCTGTCATCCCTGCTAATGGTGAGGAACTGAGCAAAAG 1989
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1990 AGCCTCCAGAGTGACAGGTGACTTAAAGCGCACGTGGCTCTACATTTACAATTGAAGTGGGCTTTGGAGATTGC 2063
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2064 AGATTCTGAATACCTGCTGGGGTGGTACAGAGGCTGTGTTCTGGTTTTGCCATCTTGGACAGGGGGTTGGGAGT 2137
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2138 CTGGGGGGCTGCCTTCTCTCCTCTTCGTGCAGCTCTGCTGGGGCCTGTCTCACACTTGTGAGCAGAGTTATGGC 2211
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2212 TGGATTCCAGGGGAGACAGAGCTTGGTTGTGAAATGTAAGGTTGTGAAATGAAGGGCTTGTGAAATGAACAAAG 2285
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2286 AATGTATTTAAGGGTCTTTCATTTTAAATCGAACACTTACATAGCACTTACTACTTGCAAAGCTCCACTCTAAG 2359
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2360 CACTTTACCCATCTTAATTCATTTAATTCTCTTCTCAACCCTAAAAAGCAGGTATTACCATTGCTCCAATCTTA 2433
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2434 CAGATGAGGAAACTCAGGCATGGAGAGGTTGAGCGACTTGCCCAAATTCATGCAGTTAGGACCTGGCAGAGCTG 2507
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2508 CGCTTTGAACCCAGGCTGCCTGGCTCTAGAGTGTGTGCACGAAACTTCACTGCCATATGAACAAAACTGCAGGA 2581
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2582 CATATGTTCTCAAAGCAAATAAGCCTCCCAGAGAGGCTTTTCCTGATGGCTTCAAGGACCTGCCCTAGCCTGGT 2655
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2656 CTGACTTCCCAGAGGGGATCCAGTCCCAACATTGGCCCTATCTTTAGACCACATTTCCATCCCATTCTCAGTGA 2729
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2730 AAACCCTGAGTCATGACAGAAGACAACCAATGCTGGAGAGAGGAGGTTTCAGGGGATGCTGTCCTGATCCAGGC 2803
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2804 TGGTGAGGCAAGGAGGGGCTGCGGCTTCCTGAGCTCTCCGAGCTGCTAATGTGCGTGGGGAATGCTAAGCAGCC 2877
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2878 TCCAGGCTCTGACCAGGTTTGTCTTCTAGGACCCACTTGCCCAATGGGTGCCAGGACACCAGGTCTGGGTCTGG 2951
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2952 AGAAGAGAATTCTTCTCCAAGGGATGTTGATGGTCCATTCCGGAAATGAAAGCTTCCCACGGTCTGCCCTGCAC 3025
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3026 CAGGCTTTCATCAGTGAGAAATACCCCGAATTTACACCCAAACCTAAAAGGAGAAGCGTAGAAGTGTTCTTGGC 3099
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3100 CCAATTCTTTTAATTGCAAGTCCTACTAGCAGGACAACTAAGGGATTATCCCTAAACTTTCATTTAAAAGTCTG 3173
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3174 GGGAGGGAAGGAAGGAGTAAAAACTTTGGCAGTCAGATTTTTCTCACTTTCACATTTATTCTTTACTATTAATG 3247
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3248 ACTTGTTCATCATGCTGTACAACAATTGTGCAAAGATGCATACGTTTGCCACTATAATTTGCCATTAAAATGTA 3321
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3322 ATAATCAGTAAGTATACACGGCGTGCCAGGTGCTAAACAGCAGATGAGGGGCGAGGTGGGTGAAGGTTCCATGC 3395
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3396 CGTGAGTTTGTGGCTAATGGAACCCCTCATGCTGCTGCTATCCTTCCTGGGCCCAGCAGTTGGATCCTGCAGGG 3469
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3470 GTGCCCCACTCTCTCGGGGACCTCAGAAATGTCCTCTATGGTTAGGGACGGCTAAGGAGGGTGTATCTGCAGGA 3543
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3544 TTCCCAGGCACTGGGAGGTGTATAGAGGTCACAGGACCCATACAACCACCCCAGACCTTGTCAGAGTGCTCCAG 3617
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3618 TCTGGCATCCGCAGAAGGCCAGGGAGGGTCAAGGGGCAGTGCTGAGCCACTGAACACAGCCACAGAGTTGGAGC 3691
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3692 TGCCAGGCAGAAGGTGCACGGCTCAGCAGAGGAGACCCCTTGAGGCAGCAATGCTGGGGCCGGAGGGTCAAGGC 3765
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3766 TGAGGAGAAGGCCACCGCAATGCCCTGTGTGGCCCTCATGAGCTGAGGGACCATGGGAAGGTGGCCTAGCCACT 3839
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3840 CTGAGCCTCAGTTTCCCCGGGAGATAAAAACAGAGACAGTATCTGCAAACTCAACAGGGCATTATGGTGAAGAA 3913
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3914 ATGAGAGGACTCAGGAACATGTTAGCTGTCACAGCCTTAGCCACTGCCAACTCCAGCCAGGCAGCTGGTCAACA 3987
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3988 TTGCCGAGCACCAGCCAGGTGACAGGAGGACAGAGGGCTCGGGGGAAACCAAATCCATCCCCCCAAACAAAAGA 4061
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4062 AAAACACAAACAAAAATAGGCACCAGAGCCGCCGGACGTGTACAAAGACTGTGTACGTTCTGCCTGTGGACAGA 4135
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4136 GCCCAGGAAGAGCACCCTGGCTCCTGTGCTCCACGCCTGCAGCTCATCTGGAAGGTTCCCTGTCTATGGCAGCC 4209
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4210 AGGTACCCAGGCCAGCCTGCAAAGGCCCAGTAACAGAACTTGTGTCTAAGATAGAACTTCATAGCTTTGTGCTG 4283
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4284 CCAAGCCCACCTGGAGCCCCCTTTAAGCCTTCTTTTGTTTGTTTGTTTGTTTGTTTTGAGACAGGATCTCATTC 4357
Query 220 ---------------- 219
Sbjct 4358 TGTTACTCAGGCTGGA 4373
