Nucleotide Global Alignment

Description

Query:
TRCN0000478282
Subject:
XR_001756631.2
Aligned Length:
2826
Identities:
187
Gaps:
2616

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  CTAAAAATAATAAATGAATAAAATAAATATATAAATAAAAATTTGACCGACAGCTTAGTAAGGATTATATAGTT  74

Query    1  ------------------------------------------------ATGGAGTCTCATTCTGTCGCCCAGAC  26
                                                            ||.||||||.|.|||||.||||||||
Sbjct   75  ATGTCTGCTACTGTTTAAAAAGGCTTTTCTTTTTTTTTTTTCTTTGACATAGAGTCTTACTCTGTTGCCCAGAC  148

Query   27  TGGAGTGAAGTGGCATGATCTCGGCTCACTGCAACCTCTGCCTCTCGAGGTCAAGCGATTCTCCTGCCTCGGCC  100
            |.|||||.|||||||.|||||.||||||||||||||||..||||..|.|.||||||.||||||.||||||.|||
Sbjct  149  TAGAGTGCAGTGGCACGATCTTGGCTCACTGCAACCTCCACCTCCTGGGTTCAAGCAATTCTCATGCCTCAGCC  222

Query  101  TCCGGAGTAGCTGGGATTACAG------GCACACGCAACCATGCCCGGCTAATTTTTTTTGTATTTTTAGTAGA  168
            |||..|||||||||||||||||      || ||| ||..|||    ||||||||||||   |||||||||||||
Sbjct  223  TCCCAAGTAGCTGGGATTACAGATGTGTGC-CAC-CACACAT----GGCTAATTTTTT---TATTTTTAGTAGA  287

Query  169  GATGGGGTTTCACCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAAG-----------------------  219
            |||||||||||||||||||||||||||||||||||||||||||..||||||                       
Sbjct  288  GATGGGGTTTCACCATGTTGGCCAGGCTGGTCTCGAACTCCTGGGCTCAAGTGATCTGACTGCCTCAGCCTCCC  361

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct  362  AAAGTGGTGCTATTACAGGTGTGAGCCACCTCGCCTGACCTAAAAACACTTTTCAGCTCCAATTTTAAACTTAA  435

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct  436  AATTTTTCTTATTTTAAAAACAACATATGCATGTATTATCAAATACAGGAAAATATGAAGAGACAGAAGTACTT  509

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct  510  ACTGATCATAATCCTACCACCAGAGACATCACTATGAATATGTTTGTACATTTTTTTCCTGTGCATTCTAAAAC  583

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct  584  ATAGTTAAGATTATGCTAAATATACAGTTCTCATGCTCTTTTATGTCAGAAGTGTTTTCCCATGACATTTTAAA  657

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct  658  CCCCATAGACATAATTTTCTAATGGCTACATACTATTCTATCTAACCATTTCCAGAGGTTGGATATTTATCCAG  731

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct  732  CTTCTGAGACTTCCTGTTATAAACAACACTTTGATGAACATCTTGGTACATAAATCTTTTGCATGTGACTACTT  805

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct  806  CCTTAGGACAGATTCCTAGAAGTGAAATTCTGGGTCAAAGAGTAGTAATATTTTAAAGGCTGTTTATGCATACT  879

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct  880  GACAAGCTGCTTCCTGGCAATTTGTCCAAACTTTTACTCTGACTAGCATTGTATGGGAGCTTCCCTGAGTGAAT  953

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct  954  GCTGCCTTTGAAGTGGGGTCAGAGACTGAGGACCAAGGGGCACAGAGAAAGAAGAGTGTGGTCCTCGATGGGAG  1027

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1028  GACCCATCACAAACCGTCTTGCACAGTGTAAACCCAGGAGAGGGGCTGAAGAAACCACTGCAGCCCGGGGCCGC  1101

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1102  CCATTCTACCTGGCCCATGGTAGGCACTCAAGAAATGGTTTGCTACGTGAATAAACAAATCCACAAACATATAT  1175

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1176  TTCTGAATTCCTATCATGCGTCAAACACAAGAGATAGGGAGAGAGGAGGAAAAGAAAAGCAAGGGATCATGGGA  1249

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1250  TAAAAGGGGACAGTGGCAGTGGGGTGGACAGAAGTCAGAACTAAATTTACCTCATGCTTTAATTCGGCGAGTTT  1323

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1324  TCTTAGAATAGTCTGACCATTGCTTACGTTGAGGGTCTATAGTCCTCCCTTCCCCACAAGACAAAGTCCAACCT  1397

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1398  AATTCAGCACCAAGATCCAAGCAGCTCGGAAGATACAGGAGGGAAAAATCTGGTGTAGATTAAGTGCCACCCCC  1471

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1472  CAGCAATGGCCAGGACACAGCAGCAATGTTACCTAAGAAAGCAACTGCGCCTCTTGCTGATCAGCTAGACATGA  1545

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1546  GGGCAGTGTCCTACCTCAGCGGTTTGCAGCGGACATGCTGTCAGGCCATTGGGATAGTTCCCATAAGCCACTCC  1619

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1620  TGGTTGTCACCACTATTCCAAGTGGGCAGGAGCAGCCTTATTGACTGAGATGGGCGGCTATGGACACACATGGG  1693

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1694  TGTACGCATGTGATGGAAATGGGGGCTTGGGGCCCTGAGGGTCCACAGGGGCTGCGTGGTCAGGGAGGGTGGGC  1767

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1768  ATGGCATCACAGGCACCCCAGGGGAGAAGCTGGCTTTCTTCCCATACTTTTGGCACTGTTTTCTGTTTTGTTTG  1841

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1842  CCTTCAAAGAGCAAGTGATGGCTGGACAGCAAAGAGGAGTGGAGGCCGGGAGAATGGGCAGCTAGCCCAGCGCT  1915

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1916  CTCCAATATCTGGGAGTCGACCGCACTCCTGCACTCCCTGTCATCCCTGCTAATGGTATTACCATTGCTCCAAT  1989

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1990  CTTACAGATGAGGAAACTCAGGCATGGAGAGGTTGAGCGACTTGCCCAAATTCATGCAGTTAGGACCTGGCAGA  2063

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2064  GCTGCGCTTTGAACCCAGGCTGCCTGGCTCTAGAGTGTGTGCACGAAACTTCACTGCCATATGAACAAAACTGC  2137

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2138  AGGACATATGTTCTCAAAGCAAATAAGCCTCCCAGAGAGGCTTTTCCTGATGGCTTCAAGGACCTGCCCTAGCC  2211

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2212  TGGTCTGACTTCCCAGAGGGGATCCAGTCCCAACATTGGCCCTATCTTTAGACCACATTTCCATCCCATTCTCA  2285

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2286  GTGAAAACCCTGAGTCATGACAGAAGACAACCAATGCTGGAGAGAGGAGGTTTCAGGTAATGCCTGTTTTAGGC  2359

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2360  ATCCTCTCCTTTAAGAAAAATTTTTATATCAAGGCACCTCAACATAATAATACCTTTATTGCATATAGGTAGAA  2433

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2434  TATAAAACTGACTTGTAAGACCACTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG  2507

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2508  TGTGTTCTCTAGCTAGCCTGCAGGGACGGGACTCAGTTCCTCAGCAGCCCAGTGCCTGGCACAACAGGCATTGA  2581

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2582  ATTAGAAGTGCCAGACATTTTCAAACTTTAAGGTATAATTTGTTTGGACACTTTGGCTGGGCATTTTGATAAAA  2655

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2656  CATCCCTAGTTAAAAGATGGCAACCAACAGGCATCAAACCAAAACCACCCTCAAAGAGCAAAATATAAGGCCTT  2729

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2730  TGTAACAAGAGTCACAGAGTTATGGCTGGCCGCGGTGGCTCATGCCTGTAATCCTAGCACTTCGGGCCGTCTCT  2803

Query  220  --------------  219
                          
Sbjct 2804  ATTAAAAACACAAA  2817

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