Nucleotide Global Alignment

Description

Query:
TRCN0000478282
Subject:
XR_002956216.1
Aligned Length:
3701
Identities:
115
Gaps:
3571

Alignment

Query    1  ATGGAGTCTCATTCTGTCGCCCAGACTGGAGTGAAGTGGCATGATCTCGGCTCACTGCAACCTCTGCCTCTCGA  74
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query   75  GGTCAAGCGATTCTCCTGCCTCGGCCTCCGGAGTAGCTGGGATTACAGGCACACGCAACCATGCCCGGCTAATT  148
                        |||.||.|.|.||||||.||||||||||||||||||||.|||||.||||..||.||||||  
Sbjct    1  ------------CTCATGTCCCAGCCTCCTGAGTAGCTGGGATTACAGGCGCACGCCACCACACCTGGCTAA--  60

Query  149  TTTTTTGTATTTTTAGTAGAGATGGGGTTTCACCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAAG---  219
             ||||||.|||||||||||||||||||||||||||||||.|||||||||||||.||||||.||||||||.|   
Sbjct   61  -TTTTTGCATTTTTAGTAGAGATGGGGTTTCACCATGTTAGCCAGGCTGGTCTTGAACTCTTGACCTCAGGTGA  133

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct  134  TCCACCCACCTCAGCCTCCCAAAGTACTGGGATTACAGGGGTGAGCCACTGTGCCCAGCCTCAAGTGTTGAGTT  207

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct  208  GTTAACCTTTCTTATTGTAATAAAATGTACATAACAAAATTTGCCGTTTTCACAGTTTTTTAAGTGTATGATTC  281

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct  282  AGCAACATTAAGCACATTCACAACGTTGTGTAACCATCACCACGTATCCCTTTCCAGAACTTTTCATCATCCCA  355

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct  356  AATAGAAACTCTGTACCCATTTAATAATAGCTCCCTATTCCTTCTACCCTCTCCACCCTCCCCACCTGCCCCTG  429

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct  430  CAGCCTGTGGCAACCTCTGTTCTACTTTATCCCTTTATAAATTGGCCTATTCAAGGTACCTCATATAAGTGGAA  503

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct  504  TCATATAATATTTGTTTTGTTTGTGTCTGGCTTGTTTCACTTAGCATAATACTTTCAAGATCCATGTTGTGGCA  577

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct  578  TATATCAGAATTTCATTACTTTTCAAGGCTGAATAATTTTCCATTGTGTGGATATATGATACTTTATTAATTCA  651

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct  652  TCTGTTGATGGATACTTGGGTCGATTCCCCTGTTTGGTTCTTGTGACTGTTGCTGTTATGAACATTTGTGTACA  725

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct  726  ATTTATCTGAGTTCTTGCTTTCTAGCATTTTTGTGGATATTTACCTAGGAGTAGAATTGCTGGATTTTATGAGA  799

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct  800  ATTCTATGTTTAACTTTTTGAGGAACTGCAAAAGGATTGGGTTTGAATTAGGTAAACCTAAAAGAGTTGTAGAA  873

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct  874  CAATGTGGTAGCTCACTAGGAAATCAGTCTTGGGGTTAGTGTCTGGTTAATACACCTGTATGTAATTAATTGGC  947

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct  948  CTCTGAGTCATGCCTTTTATCACTTCTTTTCTAAAACATTTATTAAGCACGTACTTTGTCGCAGGCCCCATTTT  1021

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1022  GGAATACAAACTATAGAGAGAAGCTCGCAGTTCATTGCAGAACACAGTTACTTTGCAGTGCACAAGTTATATGA  1095

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1096  CAAAGGAGAACACTAGCACAGGGCAGTCCAGAGGGAAGAGAGCTTGGCTCTTTCCCAGAGGAGGTGACATCTGC  1169

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1170  CTGAGGCTTGGTGGAGGAGCAGGAGCTGGCTAGTTGAAGAAGAGGTAAAAGACAGTTGCAGAGAGTGTGCTGTG  1243

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1244  CAAAGGCTCAGAAGAGTGAAGAAAATATTGGGACATACAGAAAGTTAGAATGGATCGATACAGCCCGAAGCATA  1317

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1318  GGATGTTAGGGAAGGACGTGGCAAATGATGGGGATGGAGAAGTAGCCAAAGGCCAGAGCAGGAAGGACTTTGTA  1391

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1392  AGTCATTTTAAAAGATTTCCATTTCACACTGAACGTAACGGAGAAATATTGAGGATTTTTTTTTTTTTGCAAAG  1465

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1466  AAATGATGTAATCAGAAATATATTTTATATAGCTATTATGTACCTACAAAAATTAAAAATTATAACAAATAGGC  1539

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1540  CGGGCACAGTGGCTCACGCCTGTAATTGCAGCACTTTGGGAGGCCGAGGTGGGCAGATCACTTGAGGTCAGGAG  1613

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1614  TTGAGGCCAGCCTGGCCAACATGGTGAAACCCTGCCTCTACTGAAAAATACAAAAATTAGCTGGGCATGGTAGT  1687

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1688  GGGCCCCTGTAATCCCAGCTACTCGGGAGGTCGAAGCAGGAGGATCGCTTGAGCCCGGGAGGCAGAGGTTGCAG  1761

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1762  TGAGCCAAGATCATGCCACCGCACTCCAGCCTGGGCGGCACAGTGAGACTTCATCTCAAAAGAAAAAAAAATTA  1835

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1836  TAAAAAATAATATGGTTTATAAATCAGGCAGCTATGTAAATCACAATCCCTGTTGAGAGGCTGCATTATGGCAG  1909

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1910  TAGCGGTGGGAATGGATTCAGAGTCTATAGGTGGTAGAACCGGTAGGACTTCTTGACTAATTTAGATGGCAAGG  1983

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1984  AAAAGAGGAATGCAGGATGCTTCTAGATCTCGTGGACAACCAGATGAATAATCTCATTTCCCCAGAGAGTGAAT  2057

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2058  TCAGAAGGGCAGAAACTCAGTTTTGTGAGTTCTGTTTTGCATTTTACATGCCTATCGAATATCCAAGTGGAACT  2131

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2132  GTGGGTCTAGATGGAGCTCGAGAGATAACTATGAGCTGGAGATAAATATTTGGGAGTTGCCACTTTATGTAGTG  2205

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2206  GTAATTGAGAGCATAAGAAATGGAGAGAATGCAGGGTGAAAATGTCATCTTGGGGCAGATGCAGGACAAGAGCT  2279

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2280  TGTGAAAGGAATGGCCAAGAGGAATAGGTGGACAACCAGAGGAGTGGGAGCTCACAGGAGCCTTGAGTGGAGTT  2353

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2354  TCAGAAACCCAGATTTCACACAGAAACATCAACAAATCAACTTCGCGTCTCGAGGTGATGGTATTTAAACTGTG  2427

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2428  TTCTATTGAGACCCTTCATTAATATTTGGTTTTGAAATATATTTTAACATAAGTTAAAAATAGCAAACTCAAAT  2501

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2502  ATGGTGTTTCTAACATTTTAAAACTGAAATCCAGCAAACATCAGTGCCACGTTAACTGTTTTTTTGTGCAGGTG  2575

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2576  CCAGAATAAGGCCATTTCTGGTAAATTGAAGAGCTTCCTGGTATTTCAAGCAATCCAGGTAAGAGACACAGAAA  2649

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2650  ACTGTAAATGATGCAAAAACAGCTGAACTGAATATGAGAGATGTTCAAGAGTTATGACCTGAGAAGATGTCCCC  2723

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2724  GCCATCAATAGACATTGCAGGATGTGATACCACTCTGGAGGACTTTGAAGTTTCTGGATTTGGTTGAAGAAAGA  2797

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2798  TGCTTTGGACATTTTGAATTTGAGATGCTTCTCCAGAAGTCTTATGGATCTGAAGCATGGGAGAGGAGTATAAG  2871

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2872  CTGGGGAAATAAGTTTGGGGGTTACCAGAAAACTAGCAGTGGGTAAGGCCATGAGCAAATGAAATCAAATAGAG  2945

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2946  GATGAAGAGAACAGGAGCCCTAGCAAACCTTGACAGTTAAAGAGTATGCAGGGAAAAGGACTTAGAAAGGACCC  3019

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3020  TGTAAAGAAAGATCCAAGATGACCTGAAGAACTGAGAGAGCCTCTCTGTTATTTAGGGTGACATAAATAGCGTC  3093

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3094  TGGAAGCAGGACCTGAAGTAGGATCAGTTTTGGACAGAGCTGGCAATTCTTGGTACCAGTATGCAGCACTTACA  3167

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3168  GGAGCCCTTTGAGCTCTCCACTTTCACGGCTCGCCTCTTCTGCCCTGGTGCCAGGATCTATTTTTGTCATCACC  3241

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3242  AGCCAGGAAGGATACAAGGCCTCTTCCAAGATGAAGACGAAACTATTGACAGATATTTTGTCAAGACCAAATTT  3315

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3316  TCCCTAAGGGCCCTGTCATAGATTGTTCCCTGGGCAGGATGCAGCCTCCTTCAGAGAGTGAAGAACACACCAAA  3389

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3390  AGATCCTCTACTAAATTAATCATAAGCCACATGAGGCAGGCTGGAATACAGTTACCAATCTGCTTTAATTCTCC  3463

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3464  CACTTAGATGGCCTGAAGCCGCCTGAACTGAAAGTTGGATGAAGCTCGGCTTTGAGTTTCATCGCGGGGCATCG  3537

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3538  TGTGGCCTAAGTCCTTAGCCAATGCCTGCCAAATATTAGCTTGAGTCGCAATAAAGAGAAAAGGTCCAAATTCT  3611

Query  220  -  219
             
Sbjct 3612  C  3612

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