Nucleotide Global Alignment
Description
- Query:
- TRCN0000478282
- Subject:
- XR_002956216.1
- Aligned Length:
- 3701
- Identities:
- 115
- Gaps:
- 3571
Alignment
Query 1 ATGGAGTCTCATTCTGTCGCCCAGACTGGAGTGAAGTGGCATGATCTCGGCTCACTGCAACCTCTGCCTCTCGA 74
Sbjct 1 -------------------------------------------------------------------------- 0
Query 75 GGTCAAGCGATTCTCCTGCCTCGGCCTCCGGAGTAGCTGGGATTACAGGCACACGCAACCATGCCCGGCTAATT 148
|||.||.|.|.||||||.||||||||||||||||||||.|||||.||||..||.||||||
Sbjct 1 ------------CTCATGTCCCAGCCTCCTGAGTAGCTGGGATTACAGGCGCACGCCACCACACCTGGCTAA-- 60
Query 149 TTTTTTGTATTTTTAGTAGAGATGGGGTTTCACCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAAG--- 219
||||||.|||||||||||||||||||||||||||||||.|||||||||||||.||||||.||||||||.|
Sbjct 61 -TTTTTGCATTTTTAGTAGAGATGGGGTTTCACCATGTTAGCCAGGCTGGTCTTGAACTCTTGACCTCAGGTGA 133
Query 220 -------------------------------------------------------------------------- 219
Sbjct 134 TCCACCCACCTCAGCCTCCCAAAGTACTGGGATTACAGGGGTGAGCCACTGTGCCCAGCCTCAAGTGTTGAGTT 207
Query 220 -------------------------------------------------------------------------- 219
Sbjct 208 GTTAACCTTTCTTATTGTAATAAAATGTACATAACAAAATTTGCCGTTTTCACAGTTTTTTAAGTGTATGATTC 281
Query 220 -------------------------------------------------------------------------- 219
Sbjct 282 AGCAACATTAAGCACATTCACAACGTTGTGTAACCATCACCACGTATCCCTTTCCAGAACTTTTCATCATCCCA 355
Query 220 -------------------------------------------------------------------------- 219
Sbjct 356 AATAGAAACTCTGTACCCATTTAATAATAGCTCCCTATTCCTTCTACCCTCTCCACCCTCCCCACCTGCCCCTG 429
Query 220 -------------------------------------------------------------------------- 219
Sbjct 430 CAGCCTGTGGCAACCTCTGTTCTACTTTATCCCTTTATAAATTGGCCTATTCAAGGTACCTCATATAAGTGGAA 503
Query 220 -------------------------------------------------------------------------- 219
Sbjct 504 TCATATAATATTTGTTTTGTTTGTGTCTGGCTTGTTTCACTTAGCATAATACTTTCAAGATCCATGTTGTGGCA 577
Query 220 -------------------------------------------------------------------------- 219
Sbjct 578 TATATCAGAATTTCATTACTTTTCAAGGCTGAATAATTTTCCATTGTGTGGATATATGATACTTTATTAATTCA 651
Query 220 -------------------------------------------------------------------------- 219
Sbjct 652 TCTGTTGATGGATACTTGGGTCGATTCCCCTGTTTGGTTCTTGTGACTGTTGCTGTTATGAACATTTGTGTACA 725
Query 220 -------------------------------------------------------------------------- 219
Sbjct 726 ATTTATCTGAGTTCTTGCTTTCTAGCATTTTTGTGGATATTTACCTAGGAGTAGAATTGCTGGATTTTATGAGA 799
Query 220 -------------------------------------------------------------------------- 219
Sbjct 800 ATTCTATGTTTAACTTTTTGAGGAACTGCAAAAGGATTGGGTTTGAATTAGGTAAACCTAAAAGAGTTGTAGAA 873
Query 220 -------------------------------------------------------------------------- 219
Sbjct 874 CAATGTGGTAGCTCACTAGGAAATCAGTCTTGGGGTTAGTGTCTGGTTAATACACCTGTATGTAATTAATTGGC 947
Query 220 -------------------------------------------------------------------------- 219
Sbjct 948 CTCTGAGTCATGCCTTTTATCACTTCTTTTCTAAAACATTTATTAAGCACGTACTTTGTCGCAGGCCCCATTTT 1021
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1022 GGAATACAAACTATAGAGAGAAGCTCGCAGTTCATTGCAGAACACAGTTACTTTGCAGTGCACAAGTTATATGA 1095
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1096 CAAAGGAGAACACTAGCACAGGGCAGTCCAGAGGGAAGAGAGCTTGGCTCTTTCCCAGAGGAGGTGACATCTGC 1169
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1170 CTGAGGCTTGGTGGAGGAGCAGGAGCTGGCTAGTTGAAGAAGAGGTAAAAGACAGTTGCAGAGAGTGTGCTGTG 1243
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1244 CAAAGGCTCAGAAGAGTGAAGAAAATATTGGGACATACAGAAAGTTAGAATGGATCGATACAGCCCGAAGCATA 1317
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1318 GGATGTTAGGGAAGGACGTGGCAAATGATGGGGATGGAGAAGTAGCCAAAGGCCAGAGCAGGAAGGACTTTGTA 1391
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1392 AGTCATTTTAAAAGATTTCCATTTCACACTGAACGTAACGGAGAAATATTGAGGATTTTTTTTTTTTTGCAAAG 1465
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1466 AAATGATGTAATCAGAAATATATTTTATATAGCTATTATGTACCTACAAAAATTAAAAATTATAACAAATAGGC 1539
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1540 CGGGCACAGTGGCTCACGCCTGTAATTGCAGCACTTTGGGAGGCCGAGGTGGGCAGATCACTTGAGGTCAGGAG 1613
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1614 TTGAGGCCAGCCTGGCCAACATGGTGAAACCCTGCCTCTACTGAAAAATACAAAAATTAGCTGGGCATGGTAGT 1687
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1688 GGGCCCCTGTAATCCCAGCTACTCGGGAGGTCGAAGCAGGAGGATCGCTTGAGCCCGGGAGGCAGAGGTTGCAG 1761
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1762 TGAGCCAAGATCATGCCACCGCACTCCAGCCTGGGCGGCACAGTGAGACTTCATCTCAAAAGAAAAAAAAATTA 1835
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1836 TAAAAAATAATATGGTTTATAAATCAGGCAGCTATGTAAATCACAATCCCTGTTGAGAGGCTGCATTATGGCAG 1909
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1910 TAGCGGTGGGAATGGATTCAGAGTCTATAGGTGGTAGAACCGGTAGGACTTCTTGACTAATTTAGATGGCAAGG 1983
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1984 AAAAGAGGAATGCAGGATGCTTCTAGATCTCGTGGACAACCAGATGAATAATCTCATTTCCCCAGAGAGTGAAT 2057
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2058 TCAGAAGGGCAGAAACTCAGTTTTGTGAGTTCTGTTTTGCATTTTACATGCCTATCGAATATCCAAGTGGAACT 2131
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2132 GTGGGTCTAGATGGAGCTCGAGAGATAACTATGAGCTGGAGATAAATATTTGGGAGTTGCCACTTTATGTAGTG 2205
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2206 GTAATTGAGAGCATAAGAAATGGAGAGAATGCAGGGTGAAAATGTCATCTTGGGGCAGATGCAGGACAAGAGCT 2279
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2280 TGTGAAAGGAATGGCCAAGAGGAATAGGTGGACAACCAGAGGAGTGGGAGCTCACAGGAGCCTTGAGTGGAGTT 2353
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2354 TCAGAAACCCAGATTTCACACAGAAACATCAACAAATCAACTTCGCGTCTCGAGGTGATGGTATTTAAACTGTG 2427
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2428 TTCTATTGAGACCCTTCATTAATATTTGGTTTTGAAATATATTTTAACATAAGTTAAAAATAGCAAACTCAAAT 2501
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2502 ATGGTGTTTCTAACATTTTAAAACTGAAATCCAGCAAACATCAGTGCCACGTTAACTGTTTTTTTGTGCAGGTG 2575
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2576 CCAGAATAAGGCCATTTCTGGTAAATTGAAGAGCTTCCTGGTATTTCAAGCAATCCAGGTAAGAGACACAGAAA 2649
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2650 ACTGTAAATGATGCAAAAACAGCTGAACTGAATATGAGAGATGTTCAAGAGTTATGACCTGAGAAGATGTCCCC 2723
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2724 GCCATCAATAGACATTGCAGGATGTGATACCACTCTGGAGGACTTTGAAGTTTCTGGATTTGGTTGAAGAAAGA 2797
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2798 TGCTTTGGACATTTTGAATTTGAGATGCTTCTCCAGAAGTCTTATGGATCTGAAGCATGGGAGAGGAGTATAAG 2871
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2872 CTGGGGAAATAAGTTTGGGGGTTACCAGAAAACTAGCAGTGGGTAAGGCCATGAGCAAATGAAATCAAATAGAG 2945
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2946 GATGAAGAGAACAGGAGCCCTAGCAAACCTTGACAGTTAAAGAGTATGCAGGGAAAAGGACTTAGAAAGGACCC 3019
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3020 TGTAAAGAAAGATCCAAGATGACCTGAAGAACTGAGAGAGCCTCTCTGTTATTTAGGGTGACATAAATAGCGTC 3093
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3094 TGGAAGCAGGACCTGAAGTAGGATCAGTTTTGGACAGAGCTGGCAATTCTTGGTACCAGTATGCAGCACTTACA 3167
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3168 GGAGCCCTTTGAGCTCTCCACTTTCACGGCTCGCCTCTTCTGCCCTGGTGCCAGGATCTATTTTTGTCATCACC 3241
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3242 AGCCAGGAAGGATACAAGGCCTCTTCCAAGATGAAGACGAAACTATTGACAGATATTTTGTCAAGACCAAATTT 3315
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3316 TCCCTAAGGGCCCTGTCATAGATTGTTCCCTGGGCAGGATGCAGCCTCCTTCAGAGAGTGAAGAACACACCAAA 3389
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3390 AGATCCTCTACTAAATTAATCATAAGCCACATGAGGCAGGCTGGAATACAGTTACCAATCTGCTTTAATTCTCC 3463
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3464 CACTTAGATGGCCTGAAGCCGCCTGAACTGAAAGTTGGATGAAGCTCGGCTTTGAGTTTCATCGCGGGGCATCG 3537
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3538 TGTGGCCTAAGTCCTTAGCCAATGCCTGCCAAATATTAGCTTGAGTCGCAATAAAGAGAAAAGGTCCAAATTCT 3611
Query 220 - 219
Sbjct 3612 C 3612
