Nucleotide Global Alignment
Description
- Query:
- TRCN0000478282
- Subject:
- XR_002956407.1
- Aligned Length:
- 4917
- Identities:
- 183
- Gaps:
- 4709
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATAAAAACCGGGTGCCGGCAGGCGCCAGTCGCAGGTGTGCTGCTGAGGCGTGAGAATGGCGTCCCGCGGCCGGC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GTCCGGAGCATGGCGGACCCCCAGAGCTGTTTTATGACGAGACAGAAGCCCGGAAATACGTTCGCAACTCACGG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 ATGATTGATATCCAGACCAGGATGGCTGGGCGAGCATTGGAGCTTCTTTATCTGCCAGAGAATAAGCCCTGTTA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CCTGCTGGATATTGGCTGTGGCACTGGGCTGAGTGGAAGTTATCTGTCAGATGAAGGGCACTATTGGGTGGGCC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TGGATATCAGCCCTGCCATGCTGGATGAGGCTGTGGACCGAGAGATAGAGGGAGACCTGCTGCTGGGGGATATG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 GGCCAGGGCATCCCATTCAAGCCAGGCACATTTGATGGTTGCATCAGCATTTCTGCTGTGCAGTGGCTCTGTAA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 TGCTAACAAGAAGTCTGAAAACCCTGCCAAGCGCCTGTACTGCTTTTTTGCTTCTCTTTTTTCTGTTCTCGTCC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GGGGATCCCGAGCTGTCCTGCAGCTGTACCCTGAGAACTCAGAGCAGTTGGAGCTGATCACAACCCAGGCCACA 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 AAGGCAGGCTTCTCCGGTGGCATGGTGGTAGACTACCCTAACAGTGCCAAAGCAAAGAAATTCTACCTCTGCTT 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 GTTTTCTGGGCCTTCGACCTTTATACCAGAGGTGAGGGACACTGGGTTTGCAGGCAGGCCTGTGTCTTTTGACT 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 TCCAGGCAGTGGGGCTCAGCCTGCAGAGCCTGCTGGGAGAACACTGGTGGGGAAGCAGGGCCCAGCCCCAGAGT 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 GCAGACCCTGGAGTGCTCACATCCTCTGGAATCTGGAGGCAGAGACCTCTGCTCTGCAGGTCCCAGAAAGGCGT 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 GTCAGTTCCTTCTCGTGGGACTGGACCTCGTCCCTGTCGGAAGGGTCAGGCCTGGGTGCCTGGGCTTCTGGAGT 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 GGGGCAGATGGTTTGAGAACTCTCCAGGGTGACCTGAGTGCACTTTGGTTCCTGCAGGGGCTGAGTGAAAATCA 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 GGATGAAGTTGAACCCAGGGAGTCTGTGTTCACCAATGAGAGGTAAAGCAACTGCTGAAGCCTGCCCCGGCTGC 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 AGCGGGGGCTGCCACATTTGTTAGACATGGACTTTCTCTCTGCCCTCACCCAAGCCTCTCAGGTCACATGCAGC 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 AGGGACACCAAGGTGACGGTAGAAACATCAGGTCCCATTTGGACTGTGCCTGTTTGGGGCTAGGGGTTTGGGGT 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 CCTGGATGTCTGGGTGCAGCCATGCAGCCTGGACTCCCTTTGTGAGCCCACACATGCCCCTTCCCCTTGCCACG 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 CCTGGCAGGCTGTCTCCTTCTTTTCTGATGCTGCCCTCCACCTGCATCTGGGACCCTCTCCCTTGGGTGCTGTG 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 GCTCTCCCTTCCTTCCTGCATCCTCATCTTGACTCTCCTGGGTCACTGCTGTCGGCACACAGACATGCTGCACA 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 ATTTCTCCTTTTCTAGAAAAGTTCCTTCCTTAACCCCATAACAACAACTAACCACCCCGTTGTTGCTTCCCTTC 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 ATAGCAGAACTCAGACCTGCCTCTTCTTCCCCTCCCACCATTCTCTCAATCCACTTCTCAGGCTGACAATTCTG 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 TCTCATCACAAATTGTTCTTGTCAACTCCACCACCAATTTCCATCAAGCCACATCTGGTCACTTGTGACTTTTT 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 TTCATGTCCTTAATGTGCCTGCTCGGTAGGGTCAAAGACAGCAGTGCGCTCCCTCCTTGACGCTTCCTTCACTT 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 GGCCTTCCACCCACCATCGTGGTTTCCTCAGCCTTCCTGGCTGCTCCTCACTCCACTGCTGCTTCCTCTTCGAG 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 TGCTGGGCCCAGCCTGGATTGGATCCCTTCTCTACCTGTGGTGCTGTAAATGCCAGCCGGAAGGTCCTAATTCC 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 CAAATGTGTATCTTCAGTCTCTTGCCACCTGGGGTTTCCCAATGCCCCCTCAGTGTCTATACCTGGAGTTTCCA 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 TGGGTAGTCTCTCTCTGTTACCCAGGCTAGAGTGCAGTGGTGGAATCTTAGCTCACTGCAGCCTCGAACTCCTG 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 GGCTCAAATGATCCTCCTGCCTCAGCCTCCCAAGTAGCTGAGACTACAGGTGCATGCCACCATGCCTGGTTAAT 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 TTTTAAAGTTTTTGGTAGAGATGAGGTCTTGCCATGTTGTTCAGGCTGATCTTGAACTCCTGGCCTCAAGCAAT 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 CCCCCTGTCTCGGCCTCCCAAAGTTCTGGGATGACTGATGTGAGCCACCATGCCTGGCCATCCTCCATTCTTTT 2294
Query 1 -----------ATGGAGTCTCATTCTGT-CGCCCAGACTGGAGTGAAGTGGCATGATCTCGGCTCACTGCAACC 62
|||||||||||.|||.| |.|||||.||||||||..|||||.|||||||||||||||||||||
Sbjct 2295 TTTTTTTTGAGATGGAGTCTCACTCTTTCCCCCCAGGCTGGAGTGCGGTGGCTTGATCTCGGCTCACTGCAACC 2368
Query 63 TCTGCCTCTCGAGG-TCAAGCGATTCTCCTGCCTCGGCCTCCGGAGTAGCTGGGATTACAGGCACACGCAACCA 135
|||||||| |.||| ||.||||||||||.|||.||.||||||.||||||||||||||.|||||.|.|
Sbjct 2369 TCTGCCTC-CCAGGTTCCAGCGATTCTCTTGCGTCAGCCTCCCGAGTAGCTGGGATTGCAGGCGCCC------- 2434
Query 136 TGCCCGGCTAATTTTTTTTGTATTTTTAGTAGAGATGGGGTTTCACCATGTTGGCCAGGCTGGTCTCGAACTCC 209
||||..|||| ||||||||.|||||||||||||..|||||||||||||||||||||||||.||||.||||||
Sbjct 2435 -GCCCAACTAA--TTTTTTGTGTTTTTAGTAGAGACAGGGTTTCACCATGTTGGCCAGGCTGTTCTCAAACTCC 2505
Query 210 TGACCTCAAG---------------------------------------------------------------- 219
|||||||..|
Sbjct 2506 TGACCTCGTGATTCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGTGTGAGCCACTGCGCCTGGCCTCA 2579
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2580 TCCTCCATTCTTTACCATTCTTGATCATTCCTGTCTTTCCCTACATTTCACATCTTGTCAGCCTGTCATTGAGC 2653
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2654 CCTGCTGTCCGTCCCTCAGTGTGTATCCCCGTGCTGACCCTCCCTGCTTCCAACGAGCCTAATCCAGCACTGCC 2727
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2728 CCTAGCCTGGATTGCTGAACAGCTGCCTGTGTTGTCTCCTTGCCTTTGCAGTCTTTGCCTCTTTCAGATTATTT 2801
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2802 TCTGCATAGCAGCAAGACTGGTCTTTTTCTTTTTTTCTAAAATGTAAGTTGTATCTTGTCATTGCTCTTTTAGT 2875
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2876 GCCTTCATTGCAGTTGTGCTCCCCGCTCATGTTGATTTTCCTTAACACCCTTCACTGCTCTAAGTCATACACAT 2949
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2950 ACCAGTTGACTTGGTTATTATTTGTATCTCCAGCTAGAGTGAAAACTTGGTGAGGACTGGTATTATATCCCTGA 3023
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3024 CATTAAAAATAGTGTCTTGTTAGTAAAAAGTGCTCAGTATTTTTCTGAATGAATAATTGATTATAAGGTAGTGA 3097
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3098 AGAGGGAGGTTATATCTGAGGTCCAGTTGACATGAGGGAAAGGTCTTAAGACCTTTAAGACATTTAAGAGGAAA 3171
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3172 AATGAGCCCAAAATGCATGTGTTTGGAAGGCCCACAGCTGGGCACAGCCATGCATGTTCCTCACGTCCACCATA 3245
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3246 GGTTTATGCTGCCTGACCCCTTGGGTCTTTGCTCATTTCCCTTAGTTTCCCTAGTCCATTCCCCATGGGGAGCT 3319
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3320 GGGACCCTTCTGGATGACCTCTTCTCTGAGGCGCCCATCTCGTGCTCCCAGGGAGCACTCCCATCTCCTCCCTC 3393
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3394 CCAGGGGAAGTACACATTGCCTTATCTCCATGTGTCTTAGGATCCTTCTTGTCCTTACACTGGTGTCTTCAAAC 3467
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3468 GACATGTCCTAAAAGTAAATGTGGGTAAGTTGAATGACCTGAGCATCCATTCCTCAGCTATTCAAAAAGTAGGG 3541
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3542 GTAGTGCCACCTATCTTGGCAGTGTGTTGAGGGTGCCCAGCACGTACCTTGCCATCCCTCGTTCTGTAGGCTCT 3615
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3616 CACTTCCAGTTCCTCAGATGAGGTACAGGGCAGGGAGGAGCTTCTCCCGTTACTGTCATCTCAGTCTAACCACA 3689
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3690 TTCAGGACACTTGTTTATTTTAAATAAACAGGTGAATTAAGAAAAAGTTTTTTAAGTCTTTACCTAATCAGTCT 3763
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3764 CCAGGCTCTCTTTTTGGCCTGTTCCTCCCTTCCTCCTGGCCGCCTCCCTCCCATGCCTCTCATGTGCCTCCTGC 3837
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3838 AGGGCTGGGCCCCCACTTCTCTTGGGACCTGTGCTTTGGGGCACTCCCCGTCTTCACCTCCTTCCTTTAGCTCC 3911
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3912 ATTGATGACTTTCCCCCTTGCTGCTTCTCCCATGGCTCACCTCTTGCCCCCTGGTTCGCCACTCTGCCCTCACT 3985
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3986 TTGTACTCTTTGTAGAATCTTGAGATGACTCCTCCTGTGTCCCCAGCCCTGCTCTGCAGCTGCTCCTGCTTTGT 4059
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4060 GCTGGCTCATCAGGCTCAGGCATCCGAATGGCAGCTCCTTGGCTTGCCCTGTCTCTGGTTTCTACGGATGGTCA 4133
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4134 CAGGGGTCTTCGGGGTTACCCCGCCCTCTTTCCTTCTTCCCTCATACCCCTCAGTCCTTCCTTTTCAGACCCTC 4207
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4208 CTTTCCATCCCTGTCTTCCTGCCCCCAAGCTGTGGGACCCTAAGCTCCTGCTGTGAACTGTCGACTGTGCTCTT 4281
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4282 GAAGTCTAGGTGATGATGTGTCATTGCATTGGTAGAAAGCGGCCTGCTTACTGCTGCTTAGCTGCTTCCCGAAG 4355
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4356 AGGGAACAGACTGCTCGCTGGTGTTTAGGTCTCCATGCCCGGCCCAGCTCTCTCCTCCTCTGCCCACCCAACAA 4429
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4430 CCTCTGTGGCCCGGATGGATGTTATCAGGAAGGAGGGTGTCCAGAGCGGGGAATTGTGTTATAGGGAAGGTGGA 4503
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4504 GCATTTGAGAGAAGGGGCATCCGAGGCCACCAGACTCGGAGGTAAGCTTGCCATGGATTCACATGGGGGCCAGT 4577
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4578 CGGGCAGCCCCATCCATCAGCTGTCCATCAGCTCATAGCTGTGTCTCCGCCACAGGTTCCCATTAAGGATGTCG 4651
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4652 AGGCGGGGAATGGTGAGGAAGAGTCGGGCATGGGTGCTGGAGAAGAAGGAGCGGCACAGGCGCCAGGGCAGGGA 4725
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4726 AGTCAGACCTGACACCCAGTACACCGGCCGCAAGCGCAAGCCCCGCTTCTAAGTCACCACGCGGTTCTGGAAAG 4799
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4800 GCACTTGCCTCTGCACTTTTCTATATTGTTCAGCTGACAAAGTAGTATTTTAGAAAAGTTCTAAAGTTATAAAA 4873
Query 220 --------------------------------- 219
Sbjct 4874 ATGTTTTCTGCAGTAAAAAAAAAGTTCTCTGGG 4906
