Nucleotide Global Alignment
Description
- Query:
- TRCN0000478282
- Subject:
- XR_002956483.1
- Aligned Length:
- 6971
- Identities:
- 186
- Gaps:
- 6760
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 CCACGCGTTTCGAAAGATGGCGGCGTCCAGGAGCGCGGGAGAGGCCGGCCCGGGCGGCTCCCAGGGACGCGTGG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TCCGCATGAAGCGCAGAGGCGGGCGCGGGCCGCGCCGCGGTCCTGCTGGCGGTGGGGAGAAGGCCCTGAAGAGG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CTGAAGCTAGCGGTGGAGGAGTTCGTGCACGCGACTTCGGAAGGCGAGGCTCCCGGGGGTTGCGAGGGGCGCGG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CGCCCCGGTGAGCTTTCGCCCGGGAGGGAGAAAAAGCCGTAAGGAACTGAGGAAGGAGAAGCGGCACCTGCGGA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 AAGCACGCCGGCTGCAGAGGACGGCGGGCCCCGAACAGGGTCCCGGCCTGGGAGGCCGAAGCGGAGCCGAAGAA 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 GCCAGCGGTCACCGGCAGGACACGGAGGAGCGCGCCCGCCCAGCCCCTAGTCGGGACCCCTCGCCTCCCAGGAA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 GCCGCGGCCGTCCCGGGTCAAGGCCAAGGCCACGGCCGCCACCGCAAAGACCAGACCCTCCGCAGCCGCCACCG 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CCGCTGCCCGGAAACGGGCGCTTTTAGCGGCGAACGAGGAGGAGGACCGAGAGATCCGAAAGCTGGAGCGTTGC 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 CTCGGTTTGAACAAGCGCAAAAAGAAGGACGGCAGCAGCTCCGTGCCGCTGAGCTTTGCACGCGACGGTCTTGA 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 CTATATTCTGGGAGCCCTGGAGTCTGGGAAAAATAGCGGCTTGTACGACAGCAGTGGTGAGGAGGAGGAAGATG 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 CCGGACAGACACTCCCCGAAAGTGACTTAGAGAGTGACTCCCAGGACGAAAGTGAGGAGGAGGAGGAGGGAGAC 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 GTAGAAAAGGAAAAGAAGGCGCAGGAAGCAGAAGCGCAGAGCGAGGACGACGACGAGGATACAGAAGAGGAACA 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 GGGGGAAGAAAAGGAAAAGGGAGCGCAGGAGAAAAGGAGGGGGAAGAGAGTCCGTTTTGCAGAAGATGAAGAAA 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 AGAGTGAAAATTCCTCGGAGGACGGTGACATAACGGATAAGAGTCTTTGTGGAAGTGGTGAAAAGTACATCCCA 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 CCTCATGTGAGGCAAGCTGAGGAGACAGTGGACTTCAAGAAAAAGGAAGAACTAGAAAGGCTGAAGAAACATGT 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 AAAAGGTCTACTTAACAGGTTGAGTGAACCCAACATGGCTTCCATCAGTGGGCAGCTGGAGGAACTGTACATGG 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 CCCACAGCAGAAAGGACATGAATGACACCCTGACCTCCGCTCTCATGGGTGCCTGCGTCACTGCCTCGGCCATG 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 CCCAGCAGACTGATGATGGAGCATGTTCTCTTAGTCAGCATCCTTCACCACACAGTTGGAATCGAGGTCGGTGC 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 CCACTTTCTGGAGGCAGTGGTGAGGAAGTTCGATGCCATCTATAAATACGGAAGCGAAGGGAAAGAGTGTGACA 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 ACCTGTTCACCGTCATTGCCCATTTATACAACTTCCACGTGGTACAGTCTCTCCTCATCTTCGACATTTTGAAA 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 AAACTGATTGGAACTTTCACCGAAAAAGATATTGAACTGATCTTGTTAATGCTGAAAAACGTGGGTTTTTCATT 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 GAGGAAAGATGATGCTTTATCACTTAAGGAATTGATCACTGAAGCCCAGACCAAAGCCAGCGGGGCAGGCAGCG 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 AGTTTCAGGACCAGACCAGGATTCGGTTTATGCTAGAGACGATGTTGGCCCTGAAGAACAATGACATGCGCAAA 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 ATTCCAGGCTATGACCCCGAGCCCGTGGAGAAGCTGAGGAAACTGCAGAGAGCTTTGGTCCGCAACGCCGGCTC 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 AGGTTCTGAGACGCAGCTTCGCGTCTCCTGGGACAGTGTCTTGAGTGCGGAGCAGACGGGTCGCTGGTGGATTG 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 TGGGGTCCGCCTGGAGTGGGGCCCCGATGATCGACAACAGTCACCATACGCACCTGCAGAAGCAGCTTGTGGGG 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 ACGGTAGGGACACCCATGCTCAAGGCTGCCAGGCAGAGGCACCCCCCTGTGTGGTGTGTGGTCCTGGCTTTACC 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 TGGAGCAGCTCTCTTACTGTTCTTGAATGGTCACTGAAATGTACAAGGTTTATCTGGAGGCCTTACAGAAATTG 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 CTATTAATATTACATTGTGATATAATTATTCCATTTCTGTTGTATCTTTTTATTGGACTTTAAAAGATCTAAAA 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 GTTGAATGGCACGGGGCAGGGGAGCGCATGAGGACCTGAACGCTCACGGGGCAGGAGTCCGTTGCTGAGACCCC 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 TCAGGCTGCCCCCCGGGCTGTGCATTCTAGGCTACAGGCTATGGATTTCACATTGTGGAAATTCAAGCCCATTT 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 TTCATCCAGACTTCCCTCGTTATCCCCTCATGTCCTTCCCTGTCCCAGATTCTGTGTCACTCATGGTCACGGTT 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 TCCCAGGCTCTGCCAGTGACTGGTTCTCTGTTTTATTCATCGTCGCTTGCCCTGAGGTTGAACCACGACTGAGA 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 AGCCTCCCACATGAGTGTTTTCTCCCCCAGCGGCTGTGGCTTCACTATGTGTTCCCCTTGCACAGAGGGGCGTT 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 GCCCGAGAGTGGACTTGGTGCCATCCGCCCACGTAGACCTCACAGTTCTATTCAGTGACACTGAAGTACAGTTT 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 GGCACCTCTCGGGAGGCAGTTTGCATGGAGACATGCGTATGACTTGTCCATTCATCGTGCTTCCAGGTCAGTTC 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 AAAGATCCTAGAACTCGCCCGGAAGCAGAGGATGAACACAGACATCCGGAGAAACATATTCTGCACAATAATGA 2738
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2739 CAAGTGAAGATTTTTTGGATGCTTTTGAAAAGCTTCTGAAGTAAGCATTTGTGTGCACATTTTGACCTATTAAT 2812
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2813 GAGATGCTGTAAAATAAGTAAGTTGATTTGCTTTTTGAGTTTTGGACGACTGAGTCTGATGCTGCCTAGGGAGG 2886
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2887 ACTGGGCTGTTCTCATGACCATCCGCTCACGCTGTTGGATTCGTGCATCTCTGGGCTTGGACTTAAGGATCAGC 2960
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2961 AGGAGAGAGAAATCATTCACGTTCTCATGGATTGCTGCCTTCAAGAGAAAACTTACAATCCCTTCTATGCTTTC 3034
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3035 CTGGCTAGCAAATTCTGTGAATATGAAAGGAGATTTCAGATGACTTTCCAGTTCAGCATATGGGACAAATTTCG 3108
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3109 GGACTTGGAAAACTTGCCAGCTACGAATTTCTCTAATTTGGTTCATCTGGTGGCCCACTTGTTGAAGACAAAAT 3182
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3183 CGCTTTCCCTTTCCATCTTAAAGGTAGTTGAATTCAGTGAATTGGACAAACCCAGAGTCCGTTTTTTACGAAAA 3256
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3257 GTATTAAGTATCCTATTAATGGAAACAGAAGTTGAAGACCTCAGTTTAATTTTCACAAGAGTATCTGACAACCC 3330
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3331 AAAGCTGGGGGTGTTACGTGAGGGTTTGAAGCTTTTCATCAGCCACTTCTTGCTAAAGAACGCACAGGCCCACA 3404
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3405 GAAGCGCCGACGAAGCCAACGTGCTGAGAGAGAAAGCTGACCTTGCAACGAAGTGTCTGCAAGGAAAAGCTTCC 3478
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3479 CTGAGAATGTAGTCAGGGAAGGAAGGAGGGCAGGTGGCCCTTTGACTGTAAAATGTCCTTGGTAAACCCAAAGG 3552
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3553 CTTATTCTGTTGCCTGCGTGTGAATGTTTGGTAGAGCTATATCATTGTCTGTTAATGTATTATATTTTGAGATT 3626
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3627 TTTTTTGATCTAAGGTTTTATTGTTTGTATTTCAAGCCATTTTCAAATAACTATCTTGGGGGTGAGAGGAGAAG 3700
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3701 GAGGGAGGGAAAAGGGGTCAGGCACACTGGACAGGGTTCTCTAAGCAGTGAGGCTGGTGTGTATGATTGTCTTA 3774
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3775 AAATTTTTTAATAGATATGGCCGAGCGTGATGGCTCACCCCTGTAATCCCAGCACTTTGTGAGGCCAAGGTGGG 3848
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3849 CGGATCACTTGAGGCCAGGAATTTGAAACCAGCCTGGGCAAAACCCTGTCTCTACTAAAAATATAAAAATTAGC 3922
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3923 CAGGCATGATGGCACATGCTGGTAATAGCAGCTACTGAGGTGGCTGAGGCACAAGAATTGCTTGGACCCTGGAG 3996
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3997 GTAGAGGCTGCAGTGAGCCAAGATTGTACCACTGTACTCCAGCCTGGGCTGGACAGTGAGACTTTTGACAGTGA 4070
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4071 GACTGTCAAAAAAAAAAAAAAAATTAATAGATAAAACAGGCCACTAGAGGGTGCAGTTATAAAGAAATTGATGA 4144
Query 1 ----------------------------------------------------------------------ATGG 4
|..|
Sbjct 4145 GGTTTTTACCTTTTTAAAATATTGGTTAGAAGTTCAAAAACCATCCCTTAAAGGTGATTGTTTTTTTGAGACAG 4218
Query 5 AGTCTCATTCTGTCGCCCAGACTGGAGTGAAGTGGCATG--ATCTCGGCTCACTGCAACCTCTGCCTCTCGAGG 76
|||||...||||||.||||||.|||||||.||||.|.|| |||||.||||||||||||||||.||||.||.|.
Sbjct 4219 AGTCTTGCTCTGTCACCCAGAGTGGAGTGCAGTGTCCTGTAATCTCAGCTCACTGCAACCTCTACCTCCCGGGT 4292
Query 77 TCAAGCGATTCTCCTGCCTCGGCCTCCGGAGTAGCTGGGATTACAGGCACACGCAACCATGCCCGGCTAATTTT 150
||||||||||||||||||||.||||| ..|||||||||.|||||||.|||||.||||.|||||||||| |
Sbjct 4293 TCAAGCGATTCTCCTGCCTCAGCCTC---TTTAGCTGGGACTACAGGCGCACGCCACCACGCCCGGCTAA---T 4360
Query 151 TTTTGTATTTTTAGTAGAGATGGGGTTTCACCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAAG----- 219
||||||| ||||||||||||| ||||||||||||||||||.||||||||||.|||||||||||||||.|
Sbjct 4361 TTTTGTA-TTTTAGTAGAGAT-GGGTTTCACCATGTTGGCAAGGCTGGTCTTGAACTCCTGACCTCAGGTGATA 4432
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4433 CACCCATCTCGGCCTCCCAAAGTGCTGGGATTACAGGCTTGAGCCACCACGCCCAGCTTAAATGTGATTCTTGA 4506
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4507 TACTGTTTTAAGTATTTAGGTTGCAATTAACTTTGGCAAAGTCAGTCGACATAAGCCCTGTGGATATGGCCTTA 4580
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4581 TGTACACTGTAATGCAGACAGGTGCTTTTCATCATTCATGTAACATTCTCACACAGTTGAGGATATTCATCTCC 4654
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4655 TCACCAATTCCAGATTGTAAATGTACCATCTTAAACAACTCTGAGGTCACCAAACAGTAGTTATTTGACTGTTA 4728
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4729 ATAGGTGCTACTTGCTTGCAAGGATTTGGAGATGTAAACATGAAGAAAATATAGTTACTGCCTGCAAAGAATTA 4802
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4803 ACATCCGTCTAGTGGGAGAAACAAACACACCCCACTCACTAAGTATGGAAAACTGATTCTGGGAGGAAGCAGAA 4876
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4877 ATGTCCCTAGATAACAGCATGTATTGCAGATACCCAAATGTTTATTGTTTTCTCAGCCCTTCAATTTTGCTTTT 4950
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4951 CTCTCTCAAATGCTACAGACTCAATTTAAATCTTACCTTTGATTGTTGAAAAAAGTCACTAAGATGTGAATACA 5024
Query 220 -------------------------------------------------------------------------- 219
Sbjct 5025 GAATAGACATTGAGAGGTTATATATGTCCAAAACTCATCTGTCCAGCAGTCACCGTCCTCTTCAGAGTGGTCAC 5098
Query 220 -------------------------------------------------------------------------- 219
Sbjct 5099 GTTGGGCAGATGGGCACAGGTGCTGGTGATGCCTCTCCTGGGCAAAACGCCCCATTTGTGGCACTTTCAGATAC 5172
Query 220 -------------------------------------------------------------------------- 219
Sbjct 5173 TATTTATTTACTTTTTAAGAGAGAGACAGGCTCACTCTGTCACCCAGGCCAGAGTGCAGTGGCACGATCATAGT 5246
Query 220 -------------------------------------------------------------------------- 219
Sbjct 5247 TACCGCAGCATCAAATTCCTGGACTGAAGCGGTCCTTTTGCCTCAGCCTCGCGGATAGCTAGGACCACAAGCAG 5320
Query 220 -------------------------------------------------------------------------- 219
Sbjct 5321 TAGAGACAAGATCTCCGTATGTTATACAGGCTGGCCTCAAGTGATCCTCTTACCTTGGCCTCCCAAACACCGGG 5394
Query 220 -------------------------------------------------------------------------- 219
Sbjct 5395 ATTATAGGCGTGAGCCCCCGTGCCTGGCCTCAAATTTTATTTTAGCTCGACCCTATGGCAGTTTGTGTTTGGAA 5468
Query 220 -------------------------------------------------------------------------- 219
Sbjct 5469 ATCGTGATGTGAAGTCATCAGTATCTGTGCATATCCCTAAACTAATGGTTTAAGCTTTGAAGCATGCGCAAGCA 5542
Query 220 -------------------------------------------------------------------------- 219
Sbjct 5543 ACATGAACAACTGAATACAGAAAGTAACTGAAAGCAGCACAGAGACTGTGTCGTCCCTACAGACTTCTAACCCT 5616
Query 220 -------------------------------------------------------------------------- 219
Sbjct 5617 GCATTCAGCAACATCATTCGACCCGAAGCCAGATTCAAACCCTATGTCTTCTAGCAGGTTCTGAATTTAGAGGA 5690
Query 220 -------------------------------------------------------------------------- 219
Sbjct 5691 CAAATAAGGTGACAGGTACTAAGAGAAGAGTGAATTAAGTGAAAATCTTCCCTTTGTTAAGGAGCTTTTTAACA 5764
Query 220 -------------------------------------------------------------------------- 219
Sbjct 5765 AGAGTGTCTTTGCTGGGTGGTGATTGGGATGTAACAGATCAGTTCTACTGGACTTGTAGCTTGATAGTGAAATA 5838
Query 220 -------------------------------------------------------------------------- 219
Sbjct 5839 AGGAGCTTGGGCTAAGGTATAAATCAACACACTGCTTCCTTCCTCCAGAAGGTCTTACTGTGAAGGAAAAAATG 5912
Query 220 -------------------------------------------------------------------------- 219
Sbjct 5913 TCAGTTGAACTAAATTGTGCTTCACGCCTCGGTAGATTTGCATTCTGATGCAAGCCCCCAACCTCACGGACCAA 5986
Query 220 -------------------------------------------------------------------------- 219
Sbjct 5987 GAGGATCCCTGGCTGCCTGTGAATGGCCCACATTTGAGTGGTGCTAACTTGATGTGAGTAGGCATTAATTATGG 6060
Query 220 -------------------------------------------------------------------------- 219
Sbjct 6061 GTGCGGCTACTAAGATGGGAAAAACTATCACGACAGTGGCACCACCTGATTTCATGATGTACCATATGCAGTAA 6134
Query 220 -------------------------------------------------------------------------- 219
Sbjct 6135 CCCATGTTTGAGGTACAGAATTGAAGCTGATTTTTCTGCAAAAGATGAATTTCTATAAACAATCCCATTTTTAT 6208
Query 220 -------------------------------------------------------------------------- 219
Sbjct 6209 ATTTTATTATTAAAACAAAAATACCTCTCTTTGCTAGAGAGTTATATGTATGACTTAAATTATTAGCTATGGTT 6282
Query 220 -------------------------------------------------------------------------- 219
Sbjct 6283 TGCATTTAGTACATGGCAGATTGCCTGTAAGTCTGTTCATTTTAACAACATACAGGGCTGGGCACGGTGGCTCA 6356
Query 220 -------------------------------------------------------------------------- 219
Sbjct 6357 CGCCTGTAATCCCAGCACTTTGGGAGGTTGCGGGTGGATCACTTGAGGTCAGGAGTTCGAGACCAGCCTGGCCA 6430
Query 220 -------------------------------------------------------------------------- 219
Sbjct 6431 ACATGGCAAAACCCCGTCTCTATGAAAAATATAAAAATTAGCTGGGCATGGTGGCAGGCACCTGTAATCCCAGC 6504
Query 220 -------------------------------------------------------------------------- 219
Sbjct 6505 TACTCGGGAGGCTGAGGCAGGAGAATCGCTTGAACCTGGGAGGCGGATGTTGCAGTGAGCAGAGATCGTGCCAT 6578
Query 220 -------------------------------------------------------------------------- 219
Sbjct 6579 TGCACTCCAGCCTGGGAACAAGAGTGAAACTCTCAAAAGCAGAAACAAAAACCCAACATATATGGGCTGTTAGA 6652
Query 220 -------------------------------------------------------------------------- 219
Sbjct 6653 TAGTAATTGTAATTTCGTATAAATAGTAAATGAGTACATCTTGATTAAAAGCTATGAATTCAGAATTGCTTTTA 6726
Query 220 -------------------------------------------------------------------------- 219
Sbjct 6727 AATATATAGGGGGTTTTTTGAAATTTATTACAGTGCAATTGAAAATACACTTAAAATACTGCAGGATGCTTAGT 6800
Query 220 -------------------------------------------------------------------------- 219
Sbjct 6801 GCTCAGTGTTATGTATGAACTTGTGGACTTTACAATGCAGGTTGAGAACTGCTAATGTATAGAATGACTAAACA 6874
Query 220 -------------------------------------------------------------------------- 219
Sbjct 6875 GCTGTCTTTCAGGGTATCATTTTTAAAGGTATAAGGAACAAACTTTAATGTATTGAAATGCATAAATAAAATTT 6948
Query 220 --------------- 219
Sbjct 6949 ATTTTTTATATTTTG 6963
