Nucleotide Global Alignment

Description

Query:
TRCN0000478282
Subject:
XR_002957600.1
Aligned Length:
3275
Identities:
188
Gaps:
3061

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  GTGAGCTGAGATTGCACCACTGTACTCCAGCCTGGGCGACAGAGCGAGACTGTCTTAAAAAAAAAAAAGAGAAG  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  TGGGGGAAGGCCCACCCAGGAGCTGCTCTGCCAGGCCACAGCCATGTCTAGGGTGGGCTGGACATGGCAGCCGC  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  TCCCCCTGCACAGGGTGGAATTTCCTTACTTGCCTTTGGTCAGGGGTTTACTCCCAAACGTCCCATCTTTTCTT  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  CTGCGTCTTTTCTACTTCATCACTTCTCCCTCCCAGGATGATGTCTATAAACTAAGCACTGACAGCTCACAGCA  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  CTGCTGCCCCAGCTGCAGGGATGGGTCCCAGCCTCTCTTGCCTGCTTCTTGGCTACAGGACGGACTCCACTGGC  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  CCCCGTGGGATGATCGAATCTTAAAAGGGAAGGCAGTTCTGACACCTGCTCCAGCACGGATGAACCTCGAAAAC  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  ACAATGCCAATGCAGGAAGCCTGTCACGAGACCACGTGCTGTCCGGCTGCACTTGCATGGAGCTCCCAGGACAG  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  GAAGAGTCACAGGTAGGGAAAGGGGAGGCAGGCTGCTGGGGGTGGGGGCTGACTGCTCATGGGTAGGGTTTCCT  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  TTTGGGGTGAGGGAACTGTTCTGGAATTGGATAGTGGTGACGGGCACAGAACTTTGTGCTTCTATTAAAAGCCA  666

Query    1  -------------------------------------ATGGAGTCTCATTCTGTCGCCCAGACTGGAGTGAAGT  37
                                                 |  |||.||||.||||||||||||.||||||||.|||
Sbjct  667  CTGAATTTATTTATTTTATTTTAATTTTTGAGAGACAA--GAGACTCACTCTGTCGCCCAGGCTGGAGTGCAGT  738

Query   38  GGCATGATCTCGGCTCACTGCAACCTCTGCCTCTCGAGGTCAAGCGATTCTCCTGCCTCGGCCTCCGGAGTAGC  111
            ||...||||||||||||||||||||||||||||.||.|.|||||.||||||||||||||.||||.|.|||||||
Sbjct  739  GGTGCGATCTCGGCTCACTGCAACCTCTGCCTCCCGGGTTCAAGTGATTCTCCTGCCTCAGCCTTCTGAGTAGC  812

Query  112  TGGGATTAC-AGGCACACGCAACCATGCCCGGCTAATTTTTTTTGTATTTTTAGTAGAGATGGGGTTTCACCAT  184
            ||||||||| ||||...|||.||||.||||.|||||   |||||||||||||||||||||..||||||||||||
Sbjct  813  TGGGATTACAAGGCGTGCGCTACCACGCCCAGCTAA---TTTTTGTATTTTTAGTAGAGACTGGGTTTCACCAT  883

Query  185  GTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAAG---------------------------------------  219
            |||||.|||||||.|||||||||||||||.|||.|                                       
Sbjct  884  GTTGGTCAGGCTGCTCTCGAACTCCTGACTTCATGATCCGCCTGCCTCAGCCTCGGCCTCCCAAAGTGCTGGGA  957

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct  958  TTACAGGCATGAGGTACTGCGCCTATCAGGCCGAACTGTACACTTTTAGAGGGAATTTTATGGCATGTAAATTA  1031

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1032  CATCTCAATTTAAAAAACAGGAAGGCTTAGGGGGACTGATTTGAGTAATAATAAAACTCCAGTTTCCTGCAAAA  1105

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1106  CAAAAACAAAAAGACAAGGCCGGCGAGCTCTCTAAGCACTGACTATGCCAGGAAGGCTGCCCAGCCAGGACCCC  1179

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1180  GTGGCCCACGGGGCGTCGTCCTGTTCCTGCAGTGGCACATGCAGTTGTGGGAGAGCCAGTGCCCCCACGCCGTG  1253

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1254  TCATGCAGCCTGTTTGTGAGTGTCCGCGTAACCTTTAATTCTGAGCTGATTTTGCTTTGACAGAATTTCAAACG  1327

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1328  TAAAGAAGAGTTGCAAAAATGGGTCAGGAACCCCCCGCCCCATTCTGTGTCAGAACTAAGCTTCTGAGAAGCAT  1401

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1402  CTGGCCCGCTTGAGGCCAGGAACGTATAAATACTGCCTTGGGAGGCCACATCCCTTTTGTGGCTGGTTCCCTTC  1475

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1476  CCCACCAGTGTCCCCAGCAGTGACTGTGCCCCTAGTCAGGAGCCACAGGAAGGTCGGGGCCCTGGGCTTCCTCC  1549

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1550  GTCCTGTTGGCTGGAGAGAGGCTGGGCTGGAAGGCTCGGAAGCAGGTGGAACCGGTCAAGCAGCGTGTTTTTGT  1623

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1624  TGGGGTGACGTTATGTAGGGGCTGCACAGTCATGGGGACATCGTGAAGCTGGCAGGAGGGTGGCTGTGGACAGC  1697

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1698  CCAGCGGTGGGCGGGGCCCCAGCAGGCCTGGGAGAGCCTCACGCGGCTTAAGCACGGGAGTCGGAATCACTTCA  1771

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1772  GAGCCCGCCTGCCGCTTTCTTTTCAAAATTCGGGCCTTTAGATTGGATCCAGGAAAGGAAGTCATTTCCCCAGG  1845

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1846  AAAGCACATCTGACCCCTAACCTTGCATGTGGTCACGGTGGCCGTGGGGCCCCCTCCCTTCCCCTGGCCCGCAA  1919

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1920  GGCTGGACTGTGCTGTCATCCCGCAGCAGTCACTGGGCTGGGCACAGCTGGGGGATTCAGGGAGGGTGTCCTAA  1993

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1994  GGCTTCTGTGTCCCTGGGTATCGGGGAGTGTGGGCTTCACTGAAAAGGCCAACGGGGTGGAAGCTGAGGGGGAG  2067

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2068  TCATTGCACAAATCAGATTTGCACGAAGCCTGGCACGGAGGACGCTGGAGAATGAGGGCGGCTCCCGTCCCGTT  2141

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2142  CCTGAGCACGCTCGAGTCCCGCCTCCACCTCACAGCAGCTCTTCCGTGCGGTAAGCGGGAGACTCCCATTTTCA  2215

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2216  AGGCCAACTCCTGTCCTCCCGGCTTCTGGCTGTCTCCAGGCTCATCCCCAAGACCAGCCGCAGGGACTCAGGCA  2289

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2290  CCTGACAAGAGGGTGCCCTCCCCTGGGCTGCAGGGACAAAAATGCCTGTGGCGTGAGCAGACCCCAGCTGGGCT  2363

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2364  CTCAGGAGACCCCTCACCCTCCACCCGACACGGAGGCTCAGGAGACCCCTCACCCTCCACCCAGCACTGAAGCT  2437

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2438  CAGGCAGGCACAGCACACCCTGGGTCCTGGGGATGACGCTGACCTGAGGGTGGCAGAGGTGAGGTTCCCAGCCA  2511

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2512  CACCGCTGCTGGCAGGTCAGGCCCGTGAGGAGGTGGCTGGCTGGGCCTGTGGGTCCAGGGCCTGGGGTCCGGCC  2585

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2586  CTGTGTGGGAAGTGAGCCTAGCAGATGTGCTCGGAGGTGCCACCGATGAAAAAATACTGCCACTCTGTTCACGT  2659

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2660  GGAGTTTAAGACAACGTGGGAATCGCATGTTGACACCAGGGAATTAGTTTAAAAGTTAAGGAGCTACTGAGAAA  2733

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2734  CATCTCTCCTCCTCACAGCTCACAGTTTAAAACTACGTGAACTTTTAACACCTGAGAGACCCAGGCAGGCATGC  2807

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2808  TCTGAACGCTTTAGTCCAATGCAGGGAACCCTCGTTTCACAGACAGAGCGTACAGGCTCACGGGGCCGCGCCAG  2881

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2882  GAGCATACCTGGCCTGGCGGCGGGGCACCCGGGGAAAGGCTGTGCTGCCCTCCCTGCGTTGCTGGCTCTGTGGA  2955

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2956  CTCTGGGCTTGGCAGCTGTGCGGAACGTGGGCCGGCATCGCTGTGCTCAGCCAGCGACCCCTGGGGGCCTAGCT  3029

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3030  CTGCTGAGGGCCGGCTGCCTGGTGGTGGGGTTCGTACCCTCCCACCCCTCCTGCTGTCAGCTGAGCCCAGCCTC  3103

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3104  ACTTCCCCCTCCCTGTTCTGGAAGGAGCGAGGGCAATCAGGGTGAGAAGGAGGGAGACGCAATGGTAGGAACAG  3177

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3178  CGCAAGAGGCGGCCACTGCCCCACCTCAACGGAAAGCTGTCCCACACAAAGCAGGGGCCGCCCACCTGCCCAGA  3251

Query  220  -------------------  219
                               
Sbjct 3252  CCCCACGGAAGGGGTGGCC  3270

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