Nucleotide Global Alignment
Description
- Query:
- TRCN0000478282
- Subject:
- XR_002957735.1
- Aligned Length:
- 5865
- Identities:
- 187
- Gaps:
- 5649
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 TCAGGAATGTGAAAGTGATGGTGCTCTAAAAATCAATCTGGAAGCAGATCTGCCAACATAAGAATGTGGTTGAA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CAGAGTCTAACCAGGAAAAGGAGAGATGCGAACTCGCTCCCCCTCCCCTCTCGCCATCGTCCCCCGCCCCCAGC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GAGCAAGCCGCCCCCTGCTCTGCGCTGTCTCTCCAATGGCGTCTGCCTCCGGGGCCACGGCGAAGCACGAGCAG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 ATCCTGGTCCTCGACCCGCCCATAGACCTCAAATTCAAAGGCCCCTTCACAGATGTAGTCACTACAAATCTTAA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 ATTGCGAAATCCATCGGATAGAAAAGTGTGTTTCAAAGTGAAGACTACCGTGCCTCACCGGTACTGTGTGAGGC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CCAACAGTGGAATTATTGACCCAGGGTCAACTGTGACTGTTTCAGTAATGCTACAGCCCTTTGACTATGATCCG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 AATGAAAAGAGTAAACACAAGTTTATGGTACAATTTTTGCTCCACTAAACACTTCAGATATGGAAGCTGTGTGG 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 AATGAGGCAAAACCTCATGAATTAATGGATTCCAAATGGAGATCCCCAATGAAAATGATAAATTGAATGACATG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 GAACCCAGCAAAGCTGTCCCACTGAATGCATCTAAGCAAGACGGGCCCACGCCACAACCACACAGTGCTTCACT 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 TCATGATACTGAAACAAGGAAACTAACAGAAGAGTGTAAAAGACTTCAGGGAGAAATGATGAAGCTATCAGAAG 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 CAAATCAACACCTGAGAGATGAAGGTTTAAGGCTCAGAAAGGTAGCATATTCGGATAAACCTGGATCAACCTCA 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 ACTGCATCCTTCAGAGATGTCACCAGTCTTCTTCCTTCACTTCTTGTTGTAATTGCAGCCATTTTCACTGGATT 888
Query 1 ------------------ATGGAGTCTCATTC-TGTCGCCCAGACTGGAGTGAAGTGGCATGATCTCGGCTCAC 55
|.|||||||||.|| |||.||||||.||||||||.||.|||.||||||||||||||
Sbjct 889 CCTTTTCTTTTTTTGGAGACGGAGTCTCACTCTTGTTGCCCAGGCTGGAGTGCAGAGGCGTGATCTCGGCTCAC 962
Query 56 TGCAACCTCTGCCTCTCGAGGTCAAGCGATTCTCCTGCCTCGGCCTCCGGAGTAGCTGGGATTACAGGCACACG 129
|||||||||.|.|||..|.|.||||||.|||||||..||||.||||||.||||||||||||||||||||.|.||
Sbjct 963 TGCAACCTCCGTCTCCTGGGTTCAAGCAATTCTCCCACCTCAGCCTCCCGAGTAGCTGGGATTACAGGCGCCCG 1036
Query 130 CAACCATGCCCGGCTAATTTTTTTTGTATTTTTAGTAGAGATGGGGTTTCACCATGTTGGCCAGGCTGGTCTCG 203
|.||||..|||.||||| ||||||.||||||||||||||.||||||||||||||||||||||||||||||.|
Sbjct 1037 CCACCACACCCAGCTAA---TTTTTGCATTTTTAGTAGAGAAGGGGTTTCACCATGTTGGCCAGGCTGGTCTTG 1107
Query 204 AACTCCTGACCTCAAG---------------------------------------------------------- 219
|||||||.||||||.|
Sbjct 1108 AACTCCTAACCTCAGGTGATCTACCCGCCTCGGCCTCCAAAGTGCTGGGATTACAGGAGTGAGCCACTATGCCC 1181
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1182 GGCCTTCATTGGATTCTTTCTAGGGAAATTCGTCTTGTAGAGCAAAGCATGCAGAGTGCTATTTCTTTTTTTTT 1255
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1256 TCTCTTGACCAGAAGATTTGTTTACCTACCATTTCATTGGTAGTATGGCCTGCGGTGACCATTTTTTTGTGTGT 1329
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1330 GTACAGCGTCATACAGGCTTTGCCTTTAATGATCTCTTATGGTTAGAAAACACAATAAAAACAAACTGGCTACT 1403
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1404 GGACAAATTGTATATTACCAGATCATCACTAGCAGCTTTCAGTTGCACTTCAGTCCTTTATCAAATTCATAAAG 1477
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1478 AATTGTTCTGGGAAGTGAGGAGCACCTCTGCCTGGCCACCCTGTCTGGGAAGTGAGGAGCCCCGCTTCCCGGGA 1551
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1552 GCCGCCCCATCTGGGAAGTGAGGAGCGCTTGCCTGGCCGCCCAACTGTCTGGGAAGTGAGGTGTGCCTGTGCCT 1625
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1626 GGCTGCCGCACTGTCTAGGAAGTGAGGTGCGTCTCTGCTGCCCGCCGCCCCATCTGGGAAGTGAGGAGCGCCTC 1699
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1700 TGCCCGGCTGCTGTGCAATCCTGCAAGTATGAAGTGACAGCCTTGTGTGTGATCTTTCTGCCCTCCCCAAGTTT 1773
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1774 GCATTTTCGACATTAAAATTTACTTTTTAATTAAAAGTTTTAAATTGGAGAATTAAAAAAAAAACTAATTTCAG 1847
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1848 CTTATTATTACTAGAGATGCATGAAAGCTCTACCCACATACATGCTAGGAAAAACAGTTCAGAAAACACAGGGG 1921
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1922 ACTGACTCTTCCAAAAGGAGCAGCTGTCTACTCTGCGGCCTGCTTCCAAGGGCCACTGTGGGAGGAAGCCTGGG 1995
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1996 CTGCAGCGTTCCGAGGCAGCAGCAGCAGAGGGGAAGGAAGGAAGCAGGCCTTGCCTTGTGTGGCATTCCAGTTC 2069
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2070 CCTCTCCCAGCAGGGGCCAGATTCCCCTTCCTTAGCTTCAACTACAATTTGGCGAAAGCAATTCTAGGGTAATC 2143
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2144 GGGGGCAGTGAGGGGTGGGGGGCGGTGAGAGGTTTACTTCCCTCTGCTTAGATAACAGAGGTAGAAGAAACCCT 2217
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2218 TTCTGTCAATTGCTTGGCCTCTAAATGCCACAGGCAGGCTACTTTTCATGGCTGTTCGAAGCATCCAAGCAATC 2291
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2292 CAAAGTGGCTTTGAACAACAGAGTAAGGCCAAGAAGGGCAAAAAGGGACCAGAGCTGAGGTGTTTGGGCCAGTT 2365
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2366 CTGGATCACTCATATTGTTGAGGGAGGGGTGGGGGCATAAGATAACAAGGAGCCTACAGGCCACTTGAGGAAAT 2439
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2440 TCTCTGGTTTTGCTGCAGCTTCGCTTCAAACTTCCACAGCAGAAGAGTTGGAATTCTAATGCCGCAATATCGTT 2513
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2514 GTAATACCAGGGATTCTCTAGAGGCAAGTTAAGGCTTTCTGGGCAAAGAAAACAATTCCAGATGATATTGTGAT 2587
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2588 AGAATGCTACAGTGAAATGCTTCTTAATGACTCTCCTGTCCTGCCTAAAGGACAAAGACCTATGAGTGACTTCA 2661
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2662 ACTTGACGTGATGTTTCAGTGATCTTTTACTTCAGCTCTAAGTCAGAATCAATGCCACAGGAAAAGAAAAGCTT 2735
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2736 CTTACATCTCAGACATCTGCTTGCTGAGCAAACACAAACAAGAACACATGTATTGTTTCCCAGGAGCTGGCAAA 2809
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2810 CTAGATCTCAAGTCACACAGTTACAAAGAGAGCTCTCATTCAGATGCCGGGCATATAAGCTCAGCTACCCAGAA 2883
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2884 AGTTCAGCTTTAATGAAGACTGTAGTTTTAGAATGAAAGCCTGAGCAGGAAGGATTTCTGCCCTGGGAATTCTC 2957
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2958 AATGCTCTGCCTGAGTCACACTGGAGGATGGAGATAGGCTCCTCATTCCAGCGGCCAGCAGCTGCCACAGTCAC 3031
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3032 AAGACCACCCTCCAAACAGCAAGGGTCTTACGATGACAACGGGGACTCTGAAGAGAAGCCAGTCAAAGACACAG 3105
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3106 GGCTTTGGACAAGATCAAGGGTCTTCACCAGGAAAGCTTAATGCAGAAGCCCCCTCCCTCCAAGTCCCCTCAGC 3179
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3180 GTGAGCCTTGAGCCTTGACACAGCTGTTTCCACCTGCAAGGGCTGGAGAGGCCAAGTTCACGCAGATGTTCAGC 3253
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3254 AATGTTCAAGCAAATGATGTGTAAATAGATGAAGTGGTCTTAGAGATGGTCTAAGAGGAGGGAACAGGCTCAGA 3327
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3328 GAGGTGAGGTGATTTGCCCACGATCCAATGTGAATTAGAGACCATTAGGACACGAACTCAGGTATATTTCCACT 3401
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3402 CTTACGGTGAATCATAAGGTTCCCAGTAAGTGTAAAATGCTGCAGAGAGGTTAAAAGAATATTGTAACCAACAG 3475
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3476 CTTTCTGCTTTCATTCTGCTCTGGAATCATTTGTGTAAACTCACAGCAGGAAAAGATAACAGTTTTCTTCAAGT 3549
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3550 CTGTTAAACTCACTTCTAACATAAAAACATTAAAGAAACTTGACACCATTTTTTGAGTCAGTTAATCCTAATTT 3623
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3624 GACTGGAATCAGTTACTTGTAAGTGTCTTCAAATTGCTTATGAGACACGGAGTGCTACAGGAGAGATGTGGGTG 3697
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3698 CTTCTCCCCATTGGTTTTTAACATATTATTCCTGCAATGGAATTGTCCAGATTGATGCAATTTATAGCCTCAAT 3771
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3772 TTGATTCTAAAATATATTCAAATACTCTTTAAAAATTCAGCCTTGTTTTAGCCCAAATAGAACCTTACTAGCAA 3845
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3846 GAGGGGGATTCATATACTCATCAGAAATGAATGACTTTGGGAAGAAAGGCAAGGACACCTGGAGGAAGGAAAAA 3919
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3920 AGATGACCTATCTATAAACTGCCACTCCCTCATTTATCAGGCAAGTTTGCAGCTCTGTGAATTCAATGCCTCTG 3993
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3994 TGCTCTCATTCAGGGACAAACAAGAATTTTCCTGTAAGACAGCCACAGTCACATTCTCATTTCCATGCCTAAGA 4067
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4068 GCCTGAAGCTTGAACAAAGGGCTTCAGTTAGTTTCATGTGAGCCAAAATGGAATGTGAGTGCCATTCAGAGCCA 4141
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4142 CACACTAAAAAGATTTCAGCTGGGACACTGGCTCCCACAGTCCTGGGGGAGCAAATTCCGGTTGTGTGGCAACA 4215
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4216 AAGGCTATGCTGCCAGCCCTGCCTGTCCTCCACAGGGGCCACCAGGACTGCCGTGCAGACCAGGCTCCACCCTC 4289
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4290 CCCCACACCGGTTTGTGTGACAACAGGGCTGTCTTTTCTCTTCCTGAATTTCTGAATGGAGCTGGTACATGGGC 4363
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4364 CAGCCACTATTTTGTCAGAACAGGTTAAGGGGTGTGGCCTCAGGCATATGAAAGGAGCCTCTCGCTCTTCTGGG 4437
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4438 GTGGTGATTCAGTCCTAGGAAGTTATTGCTTGGTTTACCTATTCTCATAAAAAGTCTTGATAAATGAAGGTAGT 4511
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4512 AGTAGCAGAAATATGACTATGAATGTTCTAGATCACAGCTGTAGTTGGGTGAAGGGAAAAGTAACAGAGGAGAG 4585
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4586 GGGCTAACTTCCAAACTGAGAGGGTAAAGTGCCAGTCTGTGCTAAAAGAACGTGAAAAGGAAACCTATTAGAGA 4659
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4660 AATAATACACTGGGGGGAAAGTCATAATGATAGAGGCTGGTGAGTGCCAGAAATTATACCAAAGCGAAGTTGAG 4733
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4734 ACCACAGAAATCTCAGTCTCTGAGATAAGGGCTGCTTTTGATGTCATTCGGATGATTTGGTGATTGTCAGAAAA 4807
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4808 CAACTTCTTCAGGTTACAGACCTGGACCCATGCCCACGGGTCCCGTCACAGTCACTTGGACCCGTGCCCAAACC 4881
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4882 ACACCCACCTGTGGCCCTGAGGGTTGGCACTCAGGCGCCCAGGTGGCTCCTTTGATCCCTGAAACATCCATGCA 4955
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4956 GACCCACTACTTATATTCCAGTCTGTCCTGGAGTCAAAGGAGATGAAGGAGGAAAAATATCTTTTTAAAGTATC 5029
Query 220 -------------------------------------------------------------------------- 219
Sbjct 5030 CAGGCAATTTTACTCATAGTTCTGTTTAGTTCCAGATAGCAACAGCTGATTGTTCAAAGTGCAGGGTTTTTGGA 5103
Query 220 -------------------------------------------------------------------------- 219
Sbjct 5104 TATTCAAGTACCACAGGATCGGAGAAAAGGAGTACTTGAAACCTAGAGTTGCGTTTTCACTTGAGAAGACACAC 5177
Query 220 -------------------------------------------------------------------------- 219
Sbjct 5178 TTTGGAAACACCTATCCAACAGACTACAAATATAGGCTATTAAATTAAAAATCTGGTTTCAAAATAATACCCAC 5251
Query 220 -------------------------------------------------------------------------- 219
Sbjct 5252 TTAGGTTGGAAATATCTTTCTCCAAACTCAGATCCAACTTTTGAATTGTTTGGTATCAAAGGCAAAGTTAGAGG 5325
Query 220 -------------------------------------------------------------------------- 219
Sbjct 5326 GACTTGGGTTTAAAAACTAAAATTACAAGTGAGTGCTTAAAAAAAAAACAACTCAAAACATCTTTTTATCAAAT 5399
Query 220 -------------------------------------------------------------------------- 219
Sbjct 5400 AAGGGACACACACACACAAAAGGCAAACGATGATATCTACATGCTTAGACTGGGAGAGCAGCTCCCAGGCTCCC 5473
Query 220 -------------------------------------------------------------------------- 219
Sbjct 5474 CTGGAGGGATGTTCTCTCAAACCTCAGTAAACTGAGTTTGTCATTGAACTTTGAACCTGGTAGTGAGCTCAGCA 5547
Query 220 -------------------------------------------------------------------------- 219
Sbjct 5548 ATCTACCTGGTCCAAGTCCCCCATTTTAGAGGTGAAGAAATTGAAGTCCACAGCGACTTTGTCCAGGGTGAAAA 5621
Query 220 -------------------------------------------------------------------------- 219
Sbjct 5622 GCAGAGCCAGGGCACAGCCCAGATGCTCAGCCCACCCAGAGCCCTTCTGAGACATCACACTGTGGTCACACGAC 5695
Query 220 -------------------------------------------------------------------------- 219
Sbjct 5696 GGCAGCTCCATAGCCGGCCTTGCTGCTCTGGAGACCGTGGGAGCTAGAGGACACCCCTGATTATGAATTTCAAT 5769
Query 220 -------------------------------------------------------------------------- 219
Sbjct 5770 AAAACGAGCTGCAAAGATGTTTCCAATTTAAGGGCGCTGTTGAACAGCATTTCCAAAATTTGCTTGGTGATGAG 5843
Query 220 ------------------- 219
Sbjct 5844 AATCATCTGGGGCACTTGT 5862
