Nucleotide Global Alignment
Description
- Query:
- TRCN0000478282
- Subject:
- XR_002957765.1
- Aligned Length:
- 4990
- Identities:
- 190
- Gaps:
- 4772
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ACAGAGGACGTGGGCGCCCGCCGAAGTACGTGTGCGCGCGCGCGTTTGCAGGAAAACGTGCATGGATTTCTTCG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GTGTGGCAGAGAAGGCGCCTAGGCGCTGTCCGTAGTGCTGAAATGGTGCGTGGTGAGACCTGTCTCCCCAACAC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 AAGCTAGAAGACAACAAAATAGCAGCCAGGAAACGCTCTGATAAAGCTCTAGATAGCTGCCAGGTGATGCCAGA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GATTACTAGTTTTGGGACCAATTAAAGTAGCAAGATGCAGCCAGGAGTGGTGGCTTATGCCTGTAATCCCAGCA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CTTTGGGAGGCCGAGGTAGGAGGATCACCTGAGGCCGAGCTCAAGGGAGCAGAACTAAGTTACATGATTCTGCT 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 GCGGATGTATAAGCACCACTCCAATAATTTATTATCACGGTTGGAGACTTTGACTTGTCACTTTATGACTTGAA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 ATATGGCTCCATGGTAAATGCCCATAAAGCTGATTTTTAAAATCTGGATATTACAGTTCTAATTCTCACTTAGT 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 TTAAAAGGTAGAATAGGCTTCTTGTTTCATAGATCATTTGTGTGAATGTTGATTTGTTATGTCATTGACATCAT 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 ACACACATGCTTACATTTTGAAGGTTGCTAGCGTTTCCCATTAATGCTTCTGAATTGATGCCAAAGGAAAGCAT 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 TGATTATAAATTAGGTTCCTTGGTATTAGTTGGTGCATGACCCTGACCCTTTTCAAGCTATATGAAAGGTAATG 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 ATGCTCTCAAAAGCCTGCAAAATGGCTTATTCAGGAAAGCATAATGGATTAAAAATCCATTAGGTTCCACTTTC 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 TTTGCTAGATGCTGAGATACAAAGATAAATGAGATTTGGTCTCTGCCCTCGAGGAGATACGTGGCAAAATAATA 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 TGGTAAGTTCTACAAAGTTCTATACAAACACAGATTAATATGCTATTCATGTTTTATTAGCCATTGCCAAAGAA 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 GGGATGAAGAACTGCAAAAAGATAAAACACAGAATACTTGTACTTCAGGTCCTTGCCAATATCTACTGCCCAAC 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 TTTTACAAAAAAAATTGCTGAAAGGCATGAAATATATGAATGCCTTTCTAAAGCACATGTGGATAATCTATACT 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 TCTGGAGCATCTATGATTTATTTTCAGAACAATCCAAGTTATTAGAAAGGTAAATATGTTGGTGACATTGTTTA 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 GAAGTTCCTCAAGCAGAATTGCCTTTACTATGCTTTGACATTATGCTCTCAGCTTATATACAGTAATTCTATGT 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 GAAACAGTAGCCAGCTTACACAACCTGCTCTATATCTACTACAGAGCTGTTACTAAAGTGTTGGTCAACATATA 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 ACTTACTATTTCTTATATAAAGATGCCCAAGAAATTTAGATTTCATAGATATATCCCCAAAAGCATTTCTTTCA 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 ATACCAGTTTAATGAATTGAACTTTCATACCTCACTTAAATCAACCCAGGGTAAAGTGGTATGTTCTGTTCTTA 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 CACACAATGAAAATCATGTAACTAATTAAAGTTAGCATTTATTTTAGCTACTAGGGATGCCAGAGTCAAATTAA 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 CAGCTGAAAATGAATAACTACATAAGACCTTAAGCCTTTTATATCTTTTCTTTTTTTTTAATCACCTTAACTAC 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 TGCAATTTTGGTTTCTTAGGTAATGATAATATTATTTTCTTTTAATTATTTGTTTTAATGTGTGACCTCATGTA 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 AATGTCCTCATAAAATCAGAAGTGGAGTAAATAAATAAATAAAGTAAATTTCTCTACTTTTTGATTATTGGGTG 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 AGTGTATATGGTTGTTTTATAAATTTATTCTAAATAGGATACTAAAATACAGAAAATGTATCATCTAATTAGCT 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 ATGAAGATAAAAATCTAAACTATAATGAGGAAATATTAAAATGTCAAGATGACGAAGAAATTTTTCAGTTTATA 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 TAATTATAGATCAGCTTAATTTCAAACCACTTTGTTACCCTATTGCTATTTTTATACTCTAAATAGTGTCCCTT 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 ATATGACTAAGACTTTTTGTTATCTCAGAGATTGGAAGTGTTAATTGTCCACCTTGTTAGAAGACATGGTAACT 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 ATAGGAATTTAGAAAGCATGATAGCCCAACTGTAATGAATATATTCTAGAATGAGGTTGTCACAAAGAAACTGA 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 AAACAAGAATTTCCTCTAACAACTGAGCTCAGGATTCTTTTCAGAGGAAAATTTAGCTTGCATAAATTCTTGCC 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 ATCTTGGCTCTAGTTGACTTCTTGCTCTCAACTTTTGCAAAGTGAGATCACCTTTACCTCTTCAACCTATGAGG 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 CCAACATGTTACTTTCAATTTTTCAGGAAAATCTACGTCTTGTTTGGCTGAGGTTTGATTATTATTCCTTAACT 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 AAAATATTTTAATGTAGCTGTGCTTTTTAATTTGAATATTGCTATTGATTCAAACATTGGGTAGCATATCTTTC 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 AAATGTGAAATTTTAAAACATGTATTAAAGACAAACATAAATTAGTTTTGGTATAACTATTTTTTAAGATTAAT 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 CCAATGCTTTTTTGGCTTTAGATGATGTTTGGTAATTAGCTATATTCAAAAGTCAACCTTTTTTTTTTTTCAAA 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 AAATGAACTCCTATGTATATGAGTGTTATTTTTATCTACCCATGTCTTTTTTGTCTACATATACAGTTTTAATC 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 ATTGTTTCGGGGGGAGGAATAAGAATGATTTTGAAATTTCACTAAGAAAGATATGCCCTCTTCCTAAAAATACA 2738
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2739 TATATACAGATGTTTTGCTCACAGCTCAGGTATTCATGGATCTCTGGAAGTTCATTTTTATAATCCCAAGGTAA 2812
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2813 TCCAAAGAGCCTGCTAAAAAATTCTGCTGTAAATGCATGGTACATGATCTCATTCCCTGTTTTACAACGAAGTA 2886
Query 1 ----------------------------------------------ATGGAGTCTCATTCTGTCGCCCAGACTG 28
||||||||||..|||||..|||||.|||
Sbjct 2887 TTGAATGGCTTAAACTCCTACTTTTTTTTTTTTTTTTTTTTTTGAGATGGAGTCTCCCTCTGTTACCCAGGCTG 2960
Query 29 GAGTGAAGTGGCATGATCTCGGCTCACTGCAACCTCTGCCTCTCGAGGTCAAGCGATTCTCCTGCCTCGGCCTC 102
|||||.||||||..||||||.|||||||||||||||||||||..|.|.||||||||||||||||||||.||||.
Sbjct 2961 GAGTGCAGTGGCTCGATCTCTGCTCACTGCAACCTCTGCCTCCTGGGTTCAAGCGATTCTCCTGCCTCAGCCTT 3034
Query 103 CGGAGTAGCTGGGATTACAGGCACACGCAACCATGCCCGGCTAA--------TTTTTTTTGTATTTTTAGTAGA 168
|.|||||.|||||||||||.|||||.||.|.||.|||.|||||| ||||||||||||||||||||.|
Sbjct 3035 CTGAGTAACTGGGATTACAAGCACATGCCATCAGGCCTGGCTAATTTTTATTTTTTTTTTGTATTTTTAGTACA 3108
Query 169 GAT-GGGGTTTCACCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAAG---------------------- 219
|| .||||||||.||||||||.|||||||||||||||||||||||||||.|
Sbjct 3109 -ATCAGGGTTTCAGCATGTTGGTCAGGCTGGTCTCGAACTCCTGACCTCATGATCCGCCTGCCTTGGCTTCCCA 3181
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3182 AAATGCTGGGATTACAGGCGTGAGCCAACGCGCCTGGCCAACTCCTACATATTTTAAAGCCACCCCATTAGTTT 3255
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3256 TCTATTTTTTTCCCCTTGGAGATCTTCCTTTAGGTCATTTTTACCATCTGATATCTCAAAACTAAGCCAAGGCT 3329
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3330 GAATGTGCTGAAATAGGATTAGAGAGTACAGTAATAGGATAATTAGATTTGATTAGAAAATGACTGTGTGGGAT 3403
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3404 TTTGTCAACAGTGAAGAAATGATCTAAGTATGTGGACTCCTAAGTGAATTGAGCATGATGACACTTTAGTGTAG 3477
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3478 TTAATGATCTAATGCTGGTCTGGTTGATGAGTCCCATTGAAAATGAGATGCTCTGTTTTCTGGTAAACTTTTCT 3551
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3552 GCAAAGAAAAATGTACTAAATGTTTCAGTTCAGAGTGTTCTATTTAAATGAAATTTCATTTAATTGCTTTTAGT 3625
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3626 TTTACTGCCCATAAGCCTTCAGTTGTTTCATTTAAAGTGTACTTTAAGCCCTCCACTATATTCACTGTTGAATC 3699
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3700 TAATGAGTATGAGAGGGTACCTTGGGCACAATCTCCACGAATGTATGAGCCATAACTACAGTATAGTATATAGA 3773
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3774 GATTAGCTTAAGTTATTTTGCTCTGCTAAAGATAGAGAAACAAGAGCAGTTTTCTAACATAATGTATGCTTCTG 3847
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3848 TAATAGGACTCAGTTAAAAAATAATTGGCAAATAGGAATGTCAATGAAATGTGGAAATCAATTGTTTTATACAT 3921
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3922 GATTTTCCCCAATACGTTAATGTTTTGACTACCAAGTAAAAGCAGTTGCACTCTAAGTCCACTAACACAGCTGA 3995
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3996 AGGTAGTAAGCTGTGGAGGAAAGTAGTCCTATATATAACACCCATTCACTCCTCCTTTTTCCTCTTGGCTTAAT 4069
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4070 TTCACCATACGATCTGTCTTGAAAATGCTTATTGCACAATTCTTCCTGATCTTTGTGCATTTGTCCTTGTTTTT 4143
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4144 GTAACTCAACCTTTGGTTTATTTATTCCATCATTCTTTCCTAACTCAAACAAATTTGTGAAGTTCTAAATGTAT 4217
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4218 TGAAATATATGTCGTAACTTTTATTTTTAATTGTGCTAGCATTTTCTTAGCTTTGTAAATGTTTTTTGCAGTGC 4291
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4292 TATGGTTGTGATGTTATGTAAGTTTTACACTTTTTTCTCCAACATAATTTTTTCCCGAAATATTGCCAGTTATT 4365
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4366 TTTGTTATTGAATAGACTTAATTTTCTTAGAGCAGTTTCAGGATTACAGAAAAGTCAGAGAGTACAGAAAGTTC 4439
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4440 CCATATATCTCCCATCCCTTTTCTCACAGTTTCACTTGTTATTAACATCTTACATTAGTGTGGTACATTTGTTA 4513
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4514 ACAATTGATAAAACAATTTTGTTACATTATTATTAAGTACACAGTTTACACTAGAGTTTATTCTTTTTGTTGGT 4587
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4588 CAGTTCTATGAGTTTTGAATAGTGTATAATGTCATATATTCACCATTATATTGTCATGCAGAATAGTTTCACAT 4661
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4662 TTCTGAATATCCCCTATTTATCCCTTCCTCTTCCCCTCACAAACCCCTGGAATCCATTGATCTGAAACTGTCTT 4735
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4736 GCAGTTTTCTCTTTTCCAGAATGTATGTATAGAGTCATACAGACTCTGTTGCCCTTTCAAACTGGCTTCTTTCA 4809
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4810 TTTAACAACACGCATGTAAGCATCCTTCATGACTTTTCATGGCTTGATAGCTCATTTATTTTTTATTGTTCAAT 4883
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4884 AATATTTCATTGTATGGATATGCCACAGTTTATTTATCTATATATCTGTTGAAAGATATCTCGGTTACTTCCAA 4957
Query 220 -------------------------------- 219
Sbjct 4958 TTTTTGGCAATTATGAATAAAGATACTATAAA 4989
