Nucleotide Global Alignment
Description
- Query:
- TRCN0000478282
- Subject:
- XR_002957766.1
- Aligned Length:
- 4872
- Identities:
- 190
- Gaps:
- 4654
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ACAGAGGACGTGGGCGCCCGCCGAAGTACGTGTGCGCGCGCGCGTTTGCAGGAAAACGTGCATGGATTTCTTCG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GTGTGGCAGAGAAGGCGCCTAGGCGCTGTCCGTAGTGCTGAAATGGTGCGTGGTGAGACCTGTCTCCCCAACAC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 AAGCTAGAAGACAACAAAATAGCAGCCAGGAAACGCTCTGATAAAGCTCTAGATAGCTGCCAGGCCGAGCTCAA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GGGAGCAGAACTAAGTTACATGATTCTGCTGCGGATGTATAAGCACCACTCCAATAATTTATTATCACGGTTGG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 AGACTTTGACTTGTCACTTTATGACTTGAAATATGGCTCCATGGTAAATGCCCATAAAGCTGATTTTTAAAATC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TGGATATTACAGTTCTAATTCTCACTTAGTTTAAAAGGTAGAATAGGCTTCTTGTTTCATAGATCATTTGTGTG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 AATGTTGATTTGTTATGTCATTGACATCATACACACATGCTTACATTTTGAAGGTTGCTAGCGTTTCCCATTAA 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 TGCTTCTGAATTGATGCCAAAGGAAAGCATTGATTATAAATTAGGTTCCTTGGTATTAGTTGGTGCATGACCCT 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 GACCCTTTTCAAGCTATATGAAAGGTAATGATGCTCTCAAAAGCCTGCAAAATGGCTTATTCAGGAAAGCATAA 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 TGGATTAAAAATCCATTAGGTTCCACTTTCTTTGCTAGATGCTGAGATACAAAGATAAATGAGATTTGGTCTCT 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 GCCCTCGAGGAGATACGTGGCAAAATAATATGGTAAGTTCTACAAAGTTCTATACAAACACAGATTAATATGCT 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 ATTCATGTTTTATTAGCCATTGCCAAAGAAGGGATGAAGAACTGCAAAAAGATAAAACACAGAATACTTGTACT 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 TCAGGTCCTTGCCAATATCTACTGCCCAACTTTTACAAAAAAAATTGCTGAAAGGCATGAAATATATGAATGCC 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 TTTCTAAAGCACATGTGGATAATCTATACTTCTGGAGCATCTATGATTTATTTTCAGAACAATCCAAGTTATTA 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 GAAAGGTAAATATGTTGGTGACATTGTTTAGAAGTTCCTCAAGCAGAATTGCCTTTACTATGCTTTGACATTAT 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 GCTCTCAGCTTATATACAGTAATTCTATGTGAAACAGTAGCCAGCTTACACAACCTGCTCTATATCTACTACAG 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 AGCTGTTACTAAAGTGTTGGTCAACATATAACTTACTATTTCTTATATAAAGATGCCCAAGAAATTTAGATTTC 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 ATAGATATATCCCCAAAAGCATTTCTTTCAATACCAGTTTAATGAATTGAACTTTCATACCTCACTTAAATCAA 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 CCCAGGGTAAAGTGGTATGTTCTGTTCTTACACACAATGAAAATCATGTAACTAATTAAAGTTAGCATTTATTT 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 TAGCTACTAGGGATGCCAGAGTCAAATTAACAGCTGAAAATGAATAACTACATAAGACCTTAAGCCTTTTATAT 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 CTTTTCTTTTTTTTTAATCACCTTAACTACTGCAATTTTGGTTTCTTAGGTAATGATAATATTATTTTCTTTTA 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 ATTATTTGTTTTAATGTGTGACCTCATGTAAATGTCCTCATAAAATCAGAAGTGGAGTAAATAAATAAATAAAG 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 TAAATTTCTCTACTTTTTGATTATTGGGTGAGTGTATATGGTTGTTTTATAAATTTATTCTAAATAGGATACTA 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 AAATACAGAAAATGTATCATCTAATTAGCTATGAAGATAAAAATCTAAACTATAATGAGGAAATATTAAAATGT 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 CAAGATGACGAAGAAATTTTTCAGTTTATATAATTATAGATCAGCTTAATTTCAAACCACTTTGTTACCCTATT 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 GCTATTTTTATACTCTAAATAGTGTCCCTTATATGACTAAGACTTTTTGTTATCTCAGAGATTGGAAGTGTTAA 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 TTGTCCACCTTGTTAGAAGACATGGTAACTATAGGAATTTAGAAAGCATGATAGCCCAACTGTAATGAATATAT 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 TCTAGAATGAGGTTGTCACAAAGAAACTGAAAACAAGAATTTCCTCTAACAACTGAGCTCAGGATTCTTTTCAG 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 AGGAAAATTTAGCTTGCATAAATTCTTGCCATCTTGGCTCTAGTTGACTTCTTGCTCTCAACTTTTGCAAAGTG 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 AGATCACCTTTACCTCTTCAACCTATGAGGCCAACATGTTACTTTCAATTTTTCAGGAAAATCTACGTCTTGTT 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 TGGCTGAGGTTTGATTATTATTCCTTAACTAAAATATTTTAATGTAGCTGTGCTTTTTAATTTGAATATTGCTA 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 TTGATTCAAACATTGGGTAGCATATCTTTCAAATGTGAAATTTTAAAACATGTATTAAAGACAAACATAAATTA 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 GTTTTGGTATAACTATTTTTTAAGATTAATCCAATGCTTTTTTGGCTTTAGATGATGTTTGGTAATTAGCTATA 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 TTCAAAAGTCAACCTTTTTTTTTTTTCAAAAAATGAACTCCTATGTATATGAGTGTTATTTTTATCTACCCATG 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 TCTTTTTTGTCTACATATACAGTTTTAATCATTGTTTCGGGGGGAGGAATAAGAATGATTTTGAAATTTCACTA 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 AGAAAGATATGCCCTCTTCCTAAAAATACATATATACAGATGTTTTGCTCACAGCTCAGGTATTCATGGATCTC 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 TGGAAGTTCATTTTTATAATCCCAAGGTAATCCAAAGAGCCTGCTAAAAAATTCTGCTGTAAATGCATGGTACA 2738
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2739 TGATCTCATTCCCTGTTTTACAACGAAGTATTGAATGGCTTAAACTCCTACTTTTTTTTTTTTTTTTTTTTTTG 2812
Query 1 --ATGGAGTCTCATTCTGTCGCCCAGACTGGAGTGAAGTGGCATGATCTCGGCTCACTGCAACCTCTGCCTCTC 72
||||||||||..|||||..|||||.||||||||.||||||..||||||.|||||||||||||||||||||..
Sbjct 2813 AGATGGAGTCTCCCTCTGTTACCCAGGCTGGAGTGCAGTGGCTCGATCTCTGCTCACTGCAACCTCTGCCTCCT 2886
Query 73 GAGGTCAAGCGATTCTCCTGCCTCGGCCTCCGGAGTAGCTGGGATTACAGGCACACGCAACCATGCCCGGCTAA 146
|.|.||||||||||||||||||||.||||.|.|||||.|||||||||||.|||||.||.|.||.|||.||||||
Sbjct 2887 GGGTTCAAGCGATTCTCCTGCCTCAGCCTTCTGAGTAACTGGGATTACAAGCACATGCCATCAGGCCTGGCTAA 2960
Query 147 --------TTTTTTTTGTATTTTTAGTAGAGAT-GGGGTTTCACCATGTTGGCCAGGCTGGTCTCGAACTCCTG 211
||||||||||||||||||||.| || .||||||||.||||||||.|||||||||||||||||||||
Sbjct 2961 TTTTTATTTTTTTTTTGTATTTTTAGTACA-ATCAGGGTTTCAGCATGTTGGTCAGGCTGGTCTCGAACTCCTG 3033
Query 212 ACCTCAAG------------------------------------------------------------------ 219
||||||.|
Sbjct 3034 ACCTCATGATCCGCCTGCCTTGGCTTCCCAAAATGCTGGGATTACAGGCGTGAGCCAACGCGCCTGGCCAACTC 3107
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3108 CTACATATTTTAAAGCCACCCCATTAGTTTTCTATTTTTTTCCCCTTGGAGATCTTCCTTTAGGTCATTTTTAC 3181
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3182 CATCTGATATCTCAAAACTAAGCCAAGGCTGAATGTGCTGAAATAGGATTAGAGAGTACAGTAATAGGATAATT 3255
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3256 AGATTTGATTAGAAAATGACTGTGTGGGATTTTGTCAACAGTGAAGAAATGATCTAAGTATGTGGACTCCTAAG 3329
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3330 TGAATTGAGCATGATGACACTTTAGTGTAGTTAATGATCTAATGCTGGTCTGGTTGATGAGTCCCATTGAAAAT 3403
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3404 GAGATGCTCTGTTTTCTGGTAAACTTTTCTGCAAAGAAAAATGTACTAAATGTTTCAGTTCAGAGTGTTCTATT 3477
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3478 TAAATGAAATTTCATTTAATTGCTTTTAGTTTTACTGCCCATAAGCCTTCAGTTGTTTCATTTAAAGTGTACTT 3551
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3552 TAAGCCCTCCACTATATTCACTGTTGAATCTAATGAGTATGAGAGGGTACCTTGGGCACAATCTCCACGAATGT 3625
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3626 ATGAGCCATAACTACAGTATAGTATATAGAGATTAGCTTAAGTTATTTTGCTCTGCTAAAGATAGAGAAACAAG 3699
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3700 AGCAGTTTTCTAACATAATGTATGCTTCTGTAATAGGACTCAGTTAAAAAATAATTGGCAAATAGGAATGTCAA 3773
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3774 TGAAATGTGGAAATCAATTGTTTTATACATGATTTTCCCCAATACGTTAATGTTTTGACTACCAAGTAAAAGCA 3847
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3848 GTTGCACTCTAAGTCCACTAACACAGCTGAAGGTAGTAAGCTGTGGAGGAAAGTAGTCCTATATATAACACCCA 3921
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3922 TTCACTCCTCCTTTTTCCTCTTGGCTTAATTTCACCATACGATCTGTCTTGAAAATGCTTATTGCACAATTCTT 3995
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3996 CCTGATCTTTGTGCATTTGTCCTTGTTTTTGTAACTCAACCTTTGGTTTATTTATTCCATCATTCTTTCCTAAC 4069
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4070 TCAAACAAATTTGTGAAGTTCTAAATGTATTGAAATATATGTCGTAACTTTTATTTTTAATTGTGCTAGCATTT 4143
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4144 TCTTAGCTTTGTAAATGTTTTTTGCAGTGCTATGGTTGTGATGTTATGTAAGTTTTACACTTTTTTCTCCAACA 4217
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4218 TAATTTTTTCCCGAAATATTGCCAGTTATTTTTGTTATTGAATAGACTTAATTTTCTTAGAGCAGTTTCAGGAT 4291
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4292 TACAGAAAAGTCAGAGAGTACAGAAAGTTCCCATATATCTCCCATCCCTTTTCTCACAGTTTCACTTGTTATTA 4365
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4366 ACATCTTACATTAGTGTGGTACATTTGTTAACAATTGATAAAACAATTTTGTTACATTATTATTAAGTACACAG 4439
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4440 TTTACACTAGAGTTTATTCTTTTTGTTGGTCAGTTCTATGAGTTTTGAATAGTGTATAATGTCATATATTCACC 4513
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4514 ATTATATTGTCATGCAGAATAGTTTCACATTTCTGAATATCCCCTATTTATCCCTTCCTCTTCCCCTCACAAAC 4587
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4588 CCCTGGAATCCATTGATCTGAAACTGTCTTGCAGTTTTCTCTTTTCCAGAATGTATGTATAGAGTCATACAGAC 4661
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4662 TCTGTTGCCCTTTCAAACTGGCTTCTTTCATTTAACAACACGCATGTAAGCATCCTTCATGACTTTTCATGGCT 4735
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4736 TGATAGCTCATTTATTTTTTATTGTTCAATAATATTTCATTGTATGGATATGCCACAGTTTATTTATCTATATA 4809
Query 220 -------------------------------------------------------------- 219
Sbjct 4810 TCTGTTGAAAGATATCTCGGTTACTTCCAATTTTTGGCAATTATGAATAAAGATACTATAAA 4871
