Nucleotide Global Alignment
Description
- Query:
- TRCN0000478282
- Subject:
- XR_002957767.1
- Aligned Length:
- 4866
- Identities:
- 190
- Gaps:
- 4648
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GGTTAGCGCTTTCCTGGCCTAGAAGTGTAAATGTCTGTGTCTGTTGGTGAGACAGAGGACGTGGGCGCCCGCCG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 AAGAGAAGGCGCCTAGGCGCTGTCCGTAGTGCTGAAATGGTGCGTGGTGAGACCTGTCTCCCCAACACAAGCTA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GAAGACAACAAAATAGCAGCCAGGAAACGCTCTGATAAAGCTCTAGATAGCTGCCAGGCCGAGCTCAAGGGAGC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 AGAACTAAGTTACATGATTCTGCTGCGGATGTATAAGCACCACTCCAATAATTTATTATCACGGTTGGAGACTT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TGACTTGTCACTTTATGACTTGAAATATGGCTCCATGGTAAATGCCCATAAAGCTGATTTTTAAAATCTGGATA 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TTACAGTTCTAATTCTCACTTAGTTTAAAAGGTAGAATAGGCTTCTTGTTTCATAGATCATTTGTGTGAATGTT 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 GATTTGTTATGTCATTGACATCATACACACATGCTTACATTTTGAAGGTTGCTAGCGTTTCCCATTAATGCTTC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 TGAATTGATGCCAAAGGAAAGCATTGATTATAAATTAGGTTCCTTGGTATTAGTTGGTGCATGACCCTGACCCT 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 TTTCAAGCTATATGAAAGGTAATGATGCTCTCAAAAGCCTGCAAAATGGCTTATTCAGGAAAGCATAATGGATT 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 AAAAATCCATTAGGTTCCACTTTCTTTGCTAGATGCTGAGATACAAAGATAAATGAGATTTGGTCTCTGCCCTC 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 GAGGAGATACGTGGCAAAATAATATGGTAAGTTCTACAAAGTTCTATACAAACACAGATTAATATGCTATTCAT 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 GTTTTATTAGCCATTGCCAAAGAAGGGATGAAGAACTGCAAAAAGATAAAACACAGAATACTTGTACTTCAGGT 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 CCTTGCCAATATCTACTGCCCAACTTTTACAAAAAAAATTGCTGAAAGGCATGAAATATATGAATGCCTTTCTA 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 AAGCACATGTGGATAATCTATACTTCTGGAGCATCTATGATTTATTTTCAGAACAATCCAAGTTATTAGAAAGG 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 TAAATATGTTGGTGACATTGTTTAGAAGTTCCTCAAGCAGAATTGCCTTTACTATGCTTTGACATTATGCTCTC 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 AGCTTATATACAGTAATTCTATGTGAAACAGTAGCCAGCTTACACAACCTGCTCTATATCTACTACAGAGCTGT 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 TACTAAAGTGTTGGTCAACATATAACTTACTATTTCTTATATAAAGATGCCCAAGAAATTTAGATTTCATAGAT 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 ATATCCCCAAAAGCATTTCTTTCAATACCAGTTTAATGAATTGAACTTTCATACCTCACTTAAATCAACCCAGG 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 GTAAAGTGGTATGTTCTGTTCTTACACACAATGAAAATCATGTAACTAATTAAAGTTAGCATTTATTTTAGCTA 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 CTAGGGATGCCAGAGTCAAATTAACAGCTGAAAATGAATAACTACATAAGACCTTAAGCCTTTTATATCTTTTC 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 TTTTTTTTTAATCACCTTAACTACTGCAATTTTGGTTTCTTAGGTAATGATAATATTATTTTCTTTTAATTATT 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 TGTTTTAATGTGTGACCTCATGTAAATGTCCTCATAAAATCAGAAGTGGAGTAAATAAATAAATAAAGTAAATT 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 TCTCTACTTTTTGATTATTGGGTGAGTGTATATGGTTGTTTTATAAATTTATTCTAAATAGGATACTAAAATAC 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 AGAAAATGTATCATCTAATTAGCTATGAAGATAAAAATCTAAACTATAATGAGGAAATATTAAAATGTCAAGAT 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 GACGAAGAAATTTTTCAGTTTATATAATTATAGATCAGCTTAATTTCAAACCACTTTGTTACCCTATTGCTATT 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 TTTATACTCTAAATAGTGTCCCTTATATGACTAAGACTTTTTGTTATCTCAGAGATTGGAAGTGTTAATTGTCC 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 ACCTTGTTAGAAGACATGGTAACTATAGGAATTTAGAAAGCATGATAGCCCAACTGTAATGAATATATTCTAGA 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 ATGAGGTTGTCACAAAGAAACTGAAAACAAGAATTTCCTCTAACAACTGAGCTCAGGATTCTTTTCAGAGGAAA 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 ATTTAGCTTGCATAAATTCTTGCCATCTTGGCTCTAGTTGACTTCTTGCTCTCAACTTTTGCAAAGTGAGATCA 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 CCTTTACCTCTTCAACCTATGAGGCCAACATGTTACTTTCAATTTTTCAGGAAAATCTACGTCTTGTTTGGCTG 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 AGGTTTGATTATTATTCCTTAACTAAAATATTTTAATGTAGCTGTGCTTTTTAATTTGAATATTGCTATTGATT 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 CAAACATTGGGTAGCATATCTTTCAAATGTGAAATTTTAAAACATGTATTAAAGACAAACATAAATTAGTTTTG 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 GTATAACTATTTTTTAAGATTAATCCAATGCTTTTTTGGCTTTAGATGATGTTTGGTAATTAGCTATATTCAAA 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 AGTCAACCTTTTTTTTTTTTCAAAAAATGAACTCCTATGTATATGAGTGTTATTTTTATCTACCCATGTCTTTT 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 TTGTCTACATATACAGTTTTAATCATTGTTTCGGGGGGAGGAATAAGAATGATTTTGAAATTTCACTAAGAAAG 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 ATATGCCCTCTTCCTAAAAATACATATATACAGATGTTTTGCTCACAGCTCAGGTATTCATGGATCTCTGGAAG 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 TTCATTTTTATAATCCCAAGGTAATCCAAAGAGCCTGCTAAAAAATTCTGCTGTAAATGCATGGTACATGATCT 2738
Query 1 ----------------------------------------------------------------------ATGG 4
||||
Sbjct 2739 CATTCCCTGTTTTACAACGAAGTATTGAATGGCTTAAACTCCTACTTTTTTTTTTTTTTTTTTTTTTGAGATGG 2812
Query 5 AGTCTCATTCTGTCGCCCAGACTGGAGTGAAGTGGCATGATCTCGGCTCACTGCAACCTCTGCCTCTCGAGGTC 78
||||||..|||||..|||||.||||||||.||||||..||||||.|||||||||||||||||||||..|.|.||
Sbjct 2813 AGTCTCCCTCTGTTACCCAGGCTGGAGTGCAGTGGCTCGATCTCTGCTCACTGCAACCTCTGCCTCCTGGGTTC 2886
Query 79 AAGCGATTCTCCTGCCTCGGCCTCCGGAGTAGCTGGGATTACAGGCACACGCAACCATGCCCGGCTAA------ 146
||||||||||||||||||.||||.|.|||||.|||||||||||.|||||.||.|.||.|||.||||||
Sbjct 2887 AAGCGATTCTCCTGCCTCAGCCTTCTGAGTAACTGGGATTACAAGCACATGCCATCAGGCCTGGCTAATTTTTA 2960
Query 147 --TTTTTTTTGTATTTTTAGTAGAGAT-GGGGTTTCACCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCA 217
||||||||||||||||||||.| || .||||||||.||||||||.|||||||||||||||||||||||||||
Sbjct 2961 TTTTTTTTTTGTATTTTTAGTACA-ATCAGGGTTTCAGCATGTTGGTCAGGCTGGTCTCGAACTCCTGACCTCA 3033
Query 218 AG------------------------------------------------------------------------ 219
.|
Sbjct 3034 TGATCCGCCTGCCTTGGCTTCCCAAAATGCTGGGATTACAGGCGTGAGCCAACGCGCCTGGCCAACTCCTACAT 3107
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3108 ATTTTAAAGCCACCCCATTAGTTTTCTATTTTTTTCCCCTTGGAGATCTTCCTTTAGGTCATTTTTACCATCTG 3181
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3182 ATATCTCAAAACTAAGCCAAGGCTGAATGTGCTGAAATAGGATTAGAGAGTACAGTAATAGGATAATTAGATTT 3255
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3256 GATTAGAAAATGACTGTGTGGGATTTTGTCAACAGTGAAGAAATGATCTAAGTATGTGGACTCCTAAGTGAATT 3329
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3330 GAGCATGATGACACTTTAGTGTAGTTAATGATCTAATGCTGGTCTGGTTGATGAGTCCCATTGAAAATGAGATG 3403
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3404 CTCTGTTTTCTGGTAAACTTTTCTGCAAAGAAAAATGTACTAAATGTTTCAGTTCAGAGTGTTCTATTTAAATG 3477
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3478 AAATTTCATTTAATTGCTTTTAGTTTTACTGCCCATAAGCCTTCAGTTGTTTCATTTAAAGTGTACTTTAAGCC 3551
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3552 CTCCACTATATTCACTGTTGAATCTAATGAGTATGAGAGGGTACCTTGGGCACAATCTCCACGAATGTATGAGC 3625
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3626 CATAACTACAGTATAGTATATAGAGATTAGCTTAAGTTATTTTGCTCTGCTAAAGATAGAGAAACAAGAGCAGT 3699
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3700 TTTCTAACATAATGTATGCTTCTGTAATAGGACTCAGTTAAAAAATAATTGGCAAATAGGAATGTCAATGAAAT 3773
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3774 GTGGAAATCAATTGTTTTATACATGATTTTCCCCAATACGTTAATGTTTTGACTACCAAGTAAAAGCAGTTGCA 3847
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3848 CTCTAAGTCCACTAACACAGCTGAAGGTAGTAAGCTGTGGAGGAAAGTAGTCCTATATATAACACCCATTCACT 3921
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3922 CCTCCTTTTTCCTCTTGGCTTAATTTCACCATACGATCTGTCTTGAAAATGCTTATTGCACAATTCTTCCTGAT 3995
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3996 CTTTGTGCATTTGTCCTTGTTTTTGTAACTCAACCTTTGGTTTATTTATTCCATCATTCTTTCCTAACTCAAAC 4069
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4070 AAATTTGTGAAGTTCTAAATGTATTGAAATATATGTCGTAACTTTTATTTTTAATTGTGCTAGCATTTTCTTAG 4143
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4144 CTTTGTAAATGTTTTTTGCAGTGCTATGGTTGTGATGTTATGTAAGTTTTACACTTTTTTCTCCAACATAATTT 4217
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4218 TTTCCCGAAATATTGCCAGTTATTTTTGTTATTGAATAGACTTAATTTTCTTAGAGCAGTTTCAGGATTACAGA 4291
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4292 AAAGTCAGAGAGTACAGAAAGTTCCCATATATCTCCCATCCCTTTTCTCACAGTTTCACTTGTTATTAACATCT 4365
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4366 TACATTAGTGTGGTACATTTGTTAACAATTGATAAAACAATTTTGTTACATTATTATTAAGTACACAGTTTACA 4439
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4440 CTAGAGTTTATTCTTTTTGTTGGTCAGTTCTATGAGTTTTGAATAGTGTATAATGTCATATATTCACCATTATA 4513
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4514 TTGTCATGCAGAATAGTTTCACATTTCTGAATATCCCCTATTTATCCCTTCCTCTTCCCCTCACAAACCCCTGG 4587
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4588 AATCCATTGATCTGAAACTGTCTTGCAGTTTTCTCTTTTCCAGAATGTATGTATAGAGTCATACAGACTCTGTT 4661
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4662 GCCCTTTCAAACTGGCTTCTTTCATTTAACAACACGCATGTAAGCATCCTTCATGACTTTTCATGGCTTGATAG 4735
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4736 CTCATTTATTTTTTATTGTTCAATAATATTTCATTGTATGGATATGCCACAGTTTATTTATCTATATATCTGTT 4809
Query 220 -------------------------------------------------------- 219
Sbjct 4810 GAAAGATATCTCGGTTACTTCCAATTTTTGGCAATTATGAATAAAGATACTATAAA 4865
