Nucleotide Global Alignment

Description

Query:
TRCN0000478282
Subject:
XR_002958057.1
Aligned Length:
5560
Identities:
190
Gaps:
5344

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  GAGTCCGAGCCGCCGCCGCCATGAGCTGCCCCGTGCCCGCCTGCTGCGCGCTGCTGCTAGTCCTGGGGCTCTGC  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  CGGGCGCGTCCCCGGAACGCACTGCTGCTCCTCGCGGATGACGGAGGCTTTGAGAGTGGCGCGTACAACAACAG  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  CGCCATCGCCACCCCGCACCTGGACGCCTTGGCCCGCCGCAGCCTCCTCTTTCGCAATGCCTTCACCTCGGTCA  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  GCAGCTGCTCTCCCAGCCGCGCCAGCCTCCTCACTGGCCTGCCCCAGCATCAGAATGGGATGTACGGGCTGCAC  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  CAGGACGTGCACCACTTCAACTCCTTCGACAAGGTGCGGAGCCTGCCGCTGCTGCTCAGCCAAGCTGGTGTGCG  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  CACAGGCATCATCGGGAAGAAGCACGTGGGGCCGGAGACCGTGTACCCGTTTGACTTTGCGTACACGGAGGAGA  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  ATGGCTCCGTCCTCCAGGTGGGGCGGAACATCACTAGAATTAAGCTGCTCGTCCGGAAATTCCTGCAGACTCAG  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  GATGACCGGCCTTTCTTCCTCTACGTCGCCTTCCACGACCCCCACCGCTGTGGGCACTCCCAGCCCCAGTACGG  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  AACCTTCTGTGAGAAGTTTGGCAACGGAGAGAGCGGCATGGGTCGTATCCCAGACTGGACCCCCCAGGCCTACG  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  ACCCACTGGACGTGCTGGTGCCTTACTTCGTCCCCAACACCCCGGCAGCCCGAGCCGACCTGGCCGCTCAGTAC  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  ACCACCGTCGGCCGCATGGACCAAGGAGTTGGACTGGTGCTCCAGGAGCTGCGTGACGCCGGTGTCCTGAACGA  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  CACACTGGTGATCTTCACGTCCGACAACGGGATCCCCTTCCCCAGCGGCAGGACCAACCTGTACTGGCCGGGCA  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  CTGCTGAACCCTTACTGGTGTCATCCCCGGAGCACCCAAAACGCTGGGGCCAAGTCAGCGAGGCCTACGTGAGC  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  CTCCTAGAGGAAAAGAATGAGGCTCAGAGAGGTGAAGTAAGCTGCTCAGGATTGCACAGCTGTGACTAGGCTAC  1036

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1037  TTTTGCCCACTGTAAAAGGCACCGTCATCCTGGTATCAAGATTCTGGAGAGGCCAGATTTGAAATCAAGTTTGT  1110

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1111  TTGGTAAGCGTGAAATCAGAGCAGTTGTTGTTGTTGTTGTTTTGTTTTGTTGAGACAGAGTCTCGCTCTGTCAC  1184

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1185  CCAGGCTGGAGTGCAGTGGCGCGATCTTGGCTCACCGCAACTCCACCTCCCAGTTCAAGTAATTATCATGTCTC  1258

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1259  AGCCTCCCGAGTAGCTGGGATTACAGGCGCCCGCCGCCACACCTGGCTAGTTTTTGTATTTTTAATAGAGACAG  1332

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1333  GGTTTCTCCATGTTGGCCAGGCTGGTCTCGAACTGCTGACCTCAAGCAATCTGCCCACCCTGGCCTCCCAAAGT  1406

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1407  GCTGGGATTACAGGCGTGAGCCACCACGCCCGGCCAAAATCAGGGGAATCTCATGAGCAATCAGCGGGGCCCTT  1480

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1481  GTCCCAAAGTTGTGCGGAAACGGCCCTGTCAGCGCCTCAGCTTCCTGCAAACCGCAGAGCACACTCCAGAGGCA  1554

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1555  CCTGCCGTGGGCTTTGGGGGAGCCCAGGAGCCGCTTCGAAGCCCCTGCCCAGCCCCCAGCGTGCACCTACTTGA  1628

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1629  GCTTCTTTGCCATCTTCTCGTTGACAGAGACGTGGATGACGATGGGGAAGATGTCCATCCTGTGCAGGGTGCAG  1702

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1703  ACACTGTCCAGCTGGACGTCCAGGAGGGCATGGGTGTTCTTTGTGGGAGGGAGAGAAGAAGTGAGTCAAGATCA  1776

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1777  CAGGCCTCAGAGGAAGCAAAGGGAGCCAACGCCCAGCTGAGGAAACTGAGATTCAAGGAGTTGGGAGACCTCAC  1850

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1851  CCACAGTCACGTGGATCCTAACTGGCTGAGATGAGTTTTGGGCTCCTGCTGGGCTGTTGGGACCCAGAGGTCGG  1924

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1925  CGACAAGGTCACCCAGGTCTCAGGTCGGTCCCTGTACCTTTATCTCATCCCCCTCCTCTGCATTCCTGAAACCC  1998

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1999  TTCCCAGGACAGCTCCCCTGCCCACCCCGCCCTTGACCTCACCTTTTCCATGAGGGACTCCACAGCATGGCGGG  2072

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2073  TCACCCAGCAGCGGCCCCCGGACACCTCTCCCTCCTGGATGATGTCCCCTCTCTGGCTCCAGGCCTCATACTCC  2146

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2147  TCCTGGCTCAAGTACTCTACAGGTGACATTGGACGGGGCCATCATAGACCAGCTGTGTGGGGGTCTGGGGGAGT  2220

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2221  CCCATGGTAAACACCCCTGTCCCCGTGAACCCTGCCAGCACTGGGAGAAGCTCTTCTTAGGATGTCCACTTTAC  2294

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2295  AAACCTGACCCTGCACACCCCGCTCTGTGCCCTGCACCTCCATCCTGAACTATCTGGACACAGCAGTGCCTCCT  2368

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2369  GCCACCCTGCCAGCACCGAGCCCCTCTTCCAGCCCACCCCAGTGGGGTCCAGGCCCCTCCCTGGAGCCTCACCT  2442

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2443  TGCGGGTCACGGTGCACTGCTGAGTCATGTCCTGGATGAGGGCTATGAGCTGCTGCTGAGCCCTGCAGAGACCA  2516

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2517  GCAGAGGCCCTGACCCAGCTGCCTCCTGCCAGGCTGGAGCGCTCCATCCTGGCGGCCATGCCAGTCTCCAGAGC  2590

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2591  TTTCAAAAGACTCCAGGGCCTCGGCCCACCCCTGGAGATGCTGATTTACTTGTCCTGGGGCGGGACCCAGGGGG  2664

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2665  TGCTGTTGAGCAGCCAGCGTACAGGGCCCCACTCCAGGACCTCAATATTCATGGTGGGTCCCTGGCCTGCAGCC  2738

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2739  TGGAGTCACCGAGAGAGCTGTTAGAAATGCAGAGTGCCAGGCCTCTCCCTGGACCTGCTGGCTCCGATCCCCAG  2812

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2813  GGGACTTGAGTTTGCAATGAGTGATGGGGGTGCTGAGCTCAACACTCCTGCTTTCTAGCACTGTGCGTTCCGTG  2886

Query    1  ------------------------------------------------------------------------AT  2
                                                                                    |.
Sbjct 2887  CACTTGAAACTTGGAGCCTCCCATAGGCTGATCTAGAACAATGGTTTCCTTTTCTTTTTTTTTTTTTTTGAGAC  2960

Query    3  GGAGTCTCATTCTGTCGCCCAGACTGGAGTGAAGTGGCATGATCTCGGCTCACTGCAACCTCTGCCTCTCGAGG  76
            .||||||||.||||||||||||.||||||||.|.||||...|||.||||||||||||||||||||||| ||.||
Sbjct 2961  AGAGTCTCACTCTGTCGCCCAGGCTGGAGTGCAATGGCTCAATCCCGGCTCACTGCAACCTCTGCCTC-CGGGG  3033

Query   77  -TCAAGCGATTCTCCTGCCTCGGCCTCCGGAGTAGCTGGGATTACAGGCACACGCAACCATGCCCGGCTAATTT  149
             |||||.||||||||||||||.||||||.||||||||||||||||||||||..||.||||.||||.||||| .|
Sbjct 3034  TTCAAGTGATTCTCCTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGCACCTGCCACCACGCCCAGCTAA-GT  3106

Query  150  TTTTTGTATTTTTAGTAGAGATGGGGTTTCACCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAAG----  219
            ||||||||||||||.||||||..|||||||||||.|||..||||||||||||||||||||||||||| ||    
Sbjct 3107  TTTTTGTATTTTTAATAGAGACAGGGTTTCACCAGGTTACCCAGGCTGGTCTCGAACTCCTGACCTC-AGATGA  3179

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3180  TCCACCCGCCTCGGCCTCCCAAAGTGTTTGGATTACAGGTGTGAGCCACCATGCTCGGCCTAGAGCAGTGGTTT  3253

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3254  TCAATGGAGCAAGGCAGGGGGCAATGTCACTCCCCAGGGAGGGTGACCAGCTGTCCCTGCTTGCCCAGGACCGA  3327

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3328  GGGGCTTCCCTGCAAGTGGGGCTTTCAGTGCTAAGACCAAGACAGTCCTAGGAGAACCAGGGGACCCTTGGCAA  3401

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3402  CCTATAGAGACATTTCTGGTTGTCACAGCTGGGGCATGGGAGTAGTCCCGGCATCCTGGGTAGGGCGGCCAGGG  3475

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3476  ATGCTGCTCTATATCCTGCAGTGCCCAGGACGGCCCCACCACAGACGGGGATCCAGCCCCAAACGTCCATGGTA  3549

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3550  CCAAAGCTAAGAAACCCAGAGCTAAGAAACCCAGATCTAGAATGTTCTAGAATGAACATTTCATTTGCAATATA  3623

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3624  TAAAGCATCCATCACAAAGAAACAACATCTTCAGCAGTGATCTTGGCAGGCTTCCCTCCTTAGGGGGGTCTCAC  3697

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3698  CACGCCCACCCTCTATTGCTGGGCAGGAGGAGGAAGCCGAGGCAGGCTGGGTGCCATTTCCCTGTGGGCCTCTC  3771

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3772  TGGGGACGCACCGAGCTCGAGGCAGCTGCTCACCTGGAGTAGTTGGGGATGGTGCCGTGCGCGGCAGTATCCTT  3845

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3846  CATGGTGTAAGAGTTCACGCGGTGGGCATGCCAGCAGCCGCAGCCCTGGAACATGGTGTCGGTGACGTGCAGGA  3919

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3920  CCTCGTTGCAATGCACCTGCAGCTCCCCTTTGGCCCTGCCCTCCATGGCCAGGTTGACCCGGATGTAGAATGAG  3993

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3994  TCCCCCGAGGTCGCCACTTTGGCCTCCAGGTCCTGGAGTAGCCTCTTATAACCTGATAAAAGGGGACATGAGCC  4067

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 4068  ACAGATGAGCCACAGATACGAGCCTCTGCGAGGAAGGTTGCAGAAAATTAAAGTAGGAGAGAAGGAAGGACCCT  4141

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 4142  CCCAGTCTCAGAAGCTGCTCTGGCACTGGAGTCAGTGGGTGGGAGGTTTCCAGCTGGCTTGGGGGCCTCCTGGG  4215

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 4216  GACCTGGGGCACAGCCTGGCTGATCCTCTCTTGGCTCTGGGGGTCCCTGGCTGCTGGGCGTGCAGAAGAACCAC  4289

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 4290  CAGGGACTTAAGGGTCATGGAGTCTGGCCAGGCAGCTGTGCACACGAGAGGAGTGGTATGTGTACCGTCCGTGT  4363

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 4364  TGACCTTCACAGACAGGCAGCAGAAGCCGTCCACCCTCCTGAGAAGCCCCACGGCCTCCTCCAGGGTCGTGTCC  4437

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 4438  TCCAGGACTGCCTTGAACAAGGGCTCTGAGGCTTCGTAATCAACCTGAGGGCAAGTCGAGAAGGTCAGTCTCTT  4511

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 4512  TCCCCCGGGACTCTGAATCCAGCCAGAAGACAGAAGGCGCTGAGGGCACTGAGGCGAGGCGCGGGCCAGCCCTG  4585

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 4586  CCGTAGGACCACTGCCTGCACGCCTTGGTCAAAACAAAGCCACACACCAGAGCCTCTGTGGGGCCTTCACACCT  4659

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 4660  CTAGTGATGCGTGCTACACATAGTGCTGGCCAGAGAGTCAACTGCCAACCCTTCCCCAGTCGAGATCGGGGGTT  4733

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 4734  CTTTGTGATAAGCACTTTCCTGTCTTGAAAAAGAAAAGAAAAGAAAAGAAAGAACCTCGGTTCTAGAACATTCA  4807

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 4808  AGAGCATTCTAGATAGAGGTTTCTTAGCCTTGGGATCATTCTGTGCTGCTGCGGGCTATACCGGGCCCTACAGG  4881

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 4882  ATGCTGAGTGGCATCCCTGGCCTTCACCTACCCGATGCCCTGGCTCTCCACCCACAGCCTTCCCCACTGTGAAG  4955

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 4956  GCCCACCCCCCAGGGCTTCCACCATCCACTTCATTTCTTCTCAATATTGTTCTAAGCTTAGGAGAGTAGATATT  5029

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 5030  TTTACAATAAAAATTAAGATGTGTTTTAACACCATTAGAATCTAATTGGCCCCCTTAGGATATCGGGACTATCT  5103

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 5104  CCCTGAACATCGTCAAGGGGCTCTGTTGCTTGAACTACCTCAGAGCTGATAATTGGGAACCTTAAGAGCAGGGT  5177

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 5178  TCCCCAACCCCTGGGCCACATACTGGTACTGGTCCATGGTCCATCAGGACCCGGGTCACACAGCAGGAGGGGCG  5251

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 5252  TGGTGGGCAAGTGAGCATTACGGCCTCAGCTCCACCTCCTGTCAGCTCAGCACAGCAGTAGATTCTCAGAGGAG  5325

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 5326  CATGAGCCCTATCGTGAACTGTGCAAGTGAGGGATCTAGGTTTCACGCTCCTTATGAGAATCTAATTCCTGATG  5399

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 5400  ATCTGTTACCGTCTCCCATCACCCCCAGATGGGACCGTCTAGTTGCAGGAAAACAAGCTCAGGGCTCCCACTGA  5473

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 5474  TTCTGAATTATGGTTCAGTGTATGATTCTTTCATTACATATTACAGTGTAATAATAATAGAAATAAAGTGTACA  5547

Query  220  ----------  219
                      
Sbjct 5548  ATCAATGTAA  5557

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