Nucleotide Global Alignment
Description
- Query:
- TRCN0000478282
- Subject:
- XR_002958283.1
- Aligned Length:
- 4972
- Identities:
- 191
- Gaps:
- 4757
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GCGATGTTGCCATGACGACCACGTTGCGCTGGAGATTGCGACGGGGGCTGAAACCGCGGGGAACTCGGGGAGCG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 AGTGGTGAGAACAGTGAGCACCAGCACTCCGATGGCGCTGGCGAGAGGAAAGGCTGCGGCGCGCAGAGCGAGGC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TGCGGGACCCCAGGATGGGGGACAGGAGGCTGCGGGGCCTCAGGGCTTGGTGATGTTTGAGGATGTGACGGTAT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 ATTTCTCCAGGGAGGAGTGGGGGCTCCTTAATGTGACCCAGAAGGGCCTATACCGGGATGTGATGCTGGAGAAC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TTTGCACTCGTTAGCTCACTGGGACTTGCACCTTCGAGATCCCCTGTGTTTACCCAGCTGGAGGATGATGAACA 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 GTCGTGGGTGCCCAGCTGGGTGGATGTGACTCCAGTCAGCAGAGCAGAAGCCAGGAGAGGTTTTGGTCTTGATG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 GTTTGTGTAGAGTGGAGGATGAGAGAGCCCATCCTGAGCATCTAAAGAGCTACAGAGTCATCCAGCACCAGGAC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 ACTCATAGTGAGGGGAAACCAAGAAGGCACACTGAGCATGGGGCAGCTTTCCCACCTGGTTCCAGTTGTGGGCA 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 ACAGCAAGAAGTCCATGTGGCAGAGAAGCTGTTCAAATGCAGTGACTGTGGGAAGGTGTTCTTAAAGGCCTTTG 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 CCCTCCTTGACCATCTGATAACGCATTCTGAAGAGAGACCCTTCAGATGCCCAACAGGCAGAAGTGCTTTCAAG 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 AAGTCAGCTCATATTAACCCCCGAAAAATTCACACTGGAGAAACAGCCCATGTGTGTAATGAATGTGGGAAGGC 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 CTTCAGTTACCCGTCTAAGCTGAGGAAACACCAGAAGGTTCACACAGGCATAAAACCTTTTAAGTGTAGTGACT 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 GTGGTAAAACCTTCAACCGCAAAGACGCACTTGTTCTACACCAGAGGATTCACACTGGAGAAAGGCCTTACGAG 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 TGCAGCAAATGTGGTAAAACCTTCAGTGTTCTGTCTACCCTCATTCGGCACCGGAAAGTGCACATTGGAGAAAG 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 GCCCTATGAGTGTACAGAATGTGGGAAGTTCTTTAAATACAATAATAGCTTCATTCTTCACCAGAGAGTTCACA 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 CTGGAGAAAGGCCTTTTGAATGCAAGCAATGTGGGAAAGGCTACGTGACCCGTTCAGGCCTCTATCAGCACTGG 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 AAAGTCCACACTGGGGAACGGCCCTATGAATGTAGCCTGTGTGGGAAAACCTTCACTACCAGATCCTACCGCAA 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 TCGGCACCAGCAGTTCCACACTGAAGAGAGGTCTTATGAATGTACAGAGTGTGGGAAGGCCTTCAAACATAGTT 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 CCACCCTCCTTCAGCACAAGAAAGTCCATACTCCAGAAAGGCGTCAGGAGGACAGGGCACATGGGAAGGTCGTT 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 AGCTGCTAGCACCGTGTTCATCAGGAAAGGTCTTATTCCAGAAAGGAGGTTAAGGAGAGTGGCCGTGAGAGTGC 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 CATCCGAAAGAAGCTAAACCTTGCACATCCCAACACCCACCCCAGGGAGAGTTCCCGTGTGTGCCTGGTGTGTG 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 GGACGCTTTCGGGAGCCACATTGCACTCTGACTTGCCTGGGGCTGTTGGCAGTGTCACATCACTGAGTTTATCC 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 ACCGCCATCCACCTCTATCCACCCCATAAGGTCCCTACAGCAAGTGGGACAGCAGACCTTGTGCTCCTTGCTCT 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 AAACAGTAGAGAATCGTTAATAGTGGAGCCCAAAACAGGCCTCATTCCCTACCCTTGACTGGTTTAGCTGTGGA 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 CATGACCCACCTCTGGCCGGAGGAGCTGAGCTGGTATCTGCTGGGGGCTTCCTGGGAAGGTTTACCATTTTCAT 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 GGAAATGGTTGACATTACACATGGTATTTGTCATGCCCTAGCATGGACTGTCTCATACTGCTCTGGACTATGTG 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 GTAATAAAGGCTTTATTGTTTAAGCCGCTTAAAATTTTTTTTTTATTTTTTTTTTGAGATGGTCTTATTCTGTT 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 GCCCAGGCTGGAATGCAGTGGTGCCATCATAGCTCACCACAGCCTTGAACTGCTGGTCTCAAGGGATCTTCCTG 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 CTTCAGCCTCCTGAGTAGCTGGCACTACAGGTGTGCGCCATCACACCTGGCTAATTTTTTTTTTTCATTTGTGG 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 ACAGGGTCTTGCTATATTGCCCAAGCTGGTCTCGAACTCTGAGCCTCAAGCTATCCTCCTGCCTTGGCCTCCCA 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 AAGTGCTGGGAGCCACTGTGCCTGGCCTAGTTTTTTTAGAGACAGGGTCTCACAGTCTTGCCCAGGCTGGAGTG 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 CAGTAGTGTGAAGCTAGCTCATTGCAGACTTGAACTACTGGACTCAAGTGATCCTCCTGCTTCAGCGTATTGAA 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 TAGCTAGGATTGTACTTGTGTGGCACCACATCTGACTAATTTTAAAAATTTGTATAGAGACAGGATCTTGCTAC 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 ATTGCCCAGGCTGGTCATGAACTCTTTGCCTCAAGCAGTCCTCTTGCCTCAGCCTTCCAAAGTGCTGGTATTAT 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 AGTTGTGAGCCACTGTGCCCTGCCAAGTCTCTTTTAATATTGAGGTTCTGATCCCTGTGTGTGGAGAGATTGAG 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 AATAGAATCCGGCACTATCACCGTAAGTTGAGGGAATGGCTTTTGTGGAGGTGGTCTCTTGAGTTTTTTCTGCC 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 TCAGTGGGGATGGCAGGATGACAGAAAATACCTCTAGTCAAGGTTGGCCTAATTTGTATTGGCCCCTGAGTCCT 2738
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2739 CCAGGGAAAGACTTGTAGCCTGGATGTCAGGCTTTTTTGTGGGTCCAGAGCTCACCTTGCGGAAGGGAATAGTT 2812
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2813 GGTGAGAGATCTTCTATATGTTTATGGACATAAAAAGTTGGGTTCCTTGTTCCCAGGGAATGTTCCAGAACTTC 2886
Query 1 ------------------------------------------------------------------------AT 2
||
Sbjct 2887 CAGCATTGGTCAGAAGGAGCTGTTTCCAGATTCAGCTCAAAAGTCATATTCTCCAAAATCTGGAACATGGAGAT 2960
Query 3 GGAGTCTCATTCTGTCGCCCAGACTGGAGTGAAGTGGCATGATCTCGGCTCACTGCA-ACCTCTGCCTCTCGAG 75
|||||||||..|||||||||||.||||||||.|||||||.||||||||||||||||| ||| ||||||| |.||
Sbjct 2961 GGAGTCTCACACTGTCGCCCAGGCTGGAGTGCAGTGGCACGATCTCGGCTCACTGCACACC-CTGCCTC-CCAG 3032
Query 76 G-TCAAGCGATTCTCCTGCCTCGGCCTCCGGAGTAGCTGGGATTACAGGCACACGCAACCATGCCCGGCTAATT 148
| |||..|.|||||||||||||.||||||..|||||||||||.|||||||||.|||.||||..||.||||||
Sbjct 3033 GTTCACACCATTCTCCTGCCTCAGCCTCCTAAGTAGCTGGGACTACAGGCACCCGCCACCACACCTGGCTAA-- 3104
Query 149 TTTTTTGTATTTTTAGTAGAGATGGGGTTTCACCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAAG--- 219
|||||||||||||||||||||.||||.||||||||||||.||||||.|||||||||.||||||||||||.|
Sbjct 3105 TTTTTTGTATTTTTAGTAGAGGTGGGTTTTCACCATGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATC 3178
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3179 TGCCTGCCTCAGCTTCCCAAAGTGCTGGGATTATAGGCATGAGCCACTGTGCCCGGCCAAGAAACCTTTTCTGG 3252
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3253 AAAGCTCCAGAAGACACCAGCTCAGATCTTAGCAAGAATTGTCATACCAAAATCTAAAGCCATCAGTGGGAAAG 3326
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3327 AAAATGAAGGTACTCAAAGCCTATGTAATTCTCTCTAGAGAATGGAAAAGGGAGTATAGTCTGCTTTCCCTTAG 3400
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3401 CACAGTGAGGGAGACTGATACATATCATGAGATCTTGCCAGGTGGCAGAGATGAGACAGTATGGCAGGCAGCTT 3474
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3475 TGGACATGGCTTCCAATGATCTCTGCCCTCTGGTATTCATGCTCTTGTGTAATGCTCTCCCCTTGACTGTGGGC 3548
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3549 TGGACCAAGTGACTTGCTTCTAACTAAATTTAGCAAAGATGATGGGATCTCACTTCTGTTATTAGGTTACAAAT 3622
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3623 GACTGACTTGTTGGTATTCTCCACTGCATGATCAGCTTGCAAGCTTTGATTGACAAGCTGCCATTTTGGAGAGG 3696
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3697 CCCATGTGGCAGAGAACTGGAGGAGGTCTCAGACCAACAGACGGGTCCTCAGTCCAGCAGCCCACAAAAAACTG 3770
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3771 AATGCTGCCAATTACATGAGTTTGCTTGGAAGCAGAGCCTTCCCTAGTCAAGCCTTCAGATGATACACCCCCAG 3844
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3845 CTGACATCTTGATGTTAGCCTTGTGAGAAACCCTAAAGAGGAGTCAGCTAGCTGCACCAAAGTTCCTGACCTAT 3918
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3919 AGAGACTGTGAAATAGTGACTATTGTTTTAAGCCACTAGGTTTTGAGTAATTTGTTACACAGCAATAGGTAACT 3992
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3993 AATACAGATGGCTTCTGCAATAGCAGTAATACAGTGCCGCCTAAGATTCTGGGAGCTGTGGCTTTCCCACATTT 4066
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4067 GTTGCCCATAACTCTCTTGTGAATTCTCTGGTGATTTTTCTTAAAAGGGGGTGTCTATAGCTGAAGGCTTTCCC 4140
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4141 ATTTTCACTGCATTTGTAATGCCTTTTTCCCATAGGTACTTTATATAGCTTTCTCACATAGGAGAGGTGACTGA 4214
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4215 AGACCATCCCACATTCCTTAGATGCAGGGGTTTTCTCTACTGTGAATTTTTTGGTTATAGATAAGAATCGATTT 4288
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4289 CTTCTTGAGGGTCTTTCTTCATACCAAGTATTTAAAGATCTCTCTTCAGTGTGGGTTCTTAGGTGGTTGAAGAG 4362
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4363 GGCAAAAGTCTTCATGTCTTCCCATAGCCACTGCTCTTGAAGGGCTTCTCCCTATCATGGCCTGCCCGGTGTTA 4436
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4437 TCTGATGTTAGAGCTGTGTGGCAGCATCTTCTCACTCAGCTCTTCTTCATGGCTTCCCTGTGCCATGAGTACTC 4510
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4511 TGGTGATGGAGAAAGGAAGGCCTTTCCACATTCTCTTTTGAGCTTCTCATTATTCTGGTACTCCAGTGCTGGAA 4584
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4585 GGGGGTAGTTACCCTGGAAAGCCTTCACAAATGCCTGGCCCTTGAGTCCTCTCACTTATGAATTTTGCTGTGCA 4658
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4659 TGAACTGAAAAGTGCTCTTACTGTGAGCCATGTCACATCTGAAAAGGTGGTCTTCACCATAAATGGTCTACTGT 4732
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4733 TGGTGAAGGTTTGATCCACTCCCTTGTGTGGGGTTTCTACCTGGAGTACACTGCCTAACGTTCAGCCAGGAGTA 4806
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4807 CAATCTTTGGCAGGGCAAGGGTGCCATGGTCAGGGTGAGGAACGACCAGTCATGGAGTACTGGTCCTGTCACAT 4880
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4881 ATCCCACTACTGAGCCTGTTAGGTGACATTCACATAGGCAGGGAGAACAGAGAGGGATCTAGGACAGATGTGGA 4954
Query 220 -------------- 219
Sbjct 4955 AGCAGCAGTGGCTA 4968
