Nucleotide Global Alignment

Description

Query:
TRCN0000478282
Subject:
XR_002958283.1
Aligned Length:
4972
Identities:
191
Gaps:
4757

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  GCGATGTTGCCATGACGACCACGTTGCGCTGGAGATTGCGACGGGGGCTGAAACCGCGGGGAACTCGGGGAGCG  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  AGTGGTGAGAACAGTGAGCACCAGCACTCCGATGGCGCTGGCGAGAGGAAAGGCTGCGGCGCGCAGAGCGAGGC  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  TGCGGGACCCCAGGATGGGGGACAGGAGGCTGCGGGGCCTCAGGGCTTGGTGATGTTTGAGGATGTGACGGTAT  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  ATTTCTCCAGGGAGGAGTGGGGGCTCCTTAATGTGACCCAGAAGGGCCTATACCGGGATGTGATGCTGGAGAAC  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  TTTGCACTCGTTAGCTCACTGGGACTTGCACCTTCGAGATCCCCTGTGTTTACCCAGCTGGAGGATGATGAACA  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  GTCGTGGGTGCCCAGCTGGGTGGATGTGACTCCAGTCAGCAGAGCAGAAGCCAGGAGAGGTTTTGGTCTTGATG  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  GTTTGTGTAGAGTGGAGGATGAGAGAGCCCATCCTGAGCATCTAAAGAGCTACAGAGTCATCCAGCACCAGGAC  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  ACTCATAGTGAGGGGAAACCAAGAAGGCACACTGAGCATGGGGCAGCTTTCCCACCTGGTTCCAGTTGTGGGCA  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  ACAGCAAGAAGTCCATGTGGCAGAGAAGCTGTTCAAATGCAGTGACTGTGGGAAGGTGTTCTTAAAGGCCTTTG  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  CCCTCCTTGACCATCTGATAACGCATTCTGAAGAGAGACCCTTCAGATGCCCAACAGGCAGAAGTGCTTTCAAG  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  AAGTCAGCTCATATTAACCCCCGAAAAATTCACACTGGAGAAACAGCCCATGTGTGTAATGAATGTGGGAAGGC  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  CTTCAGTTACCCGTCTAAGCTGAGGAAACACCAGAAGGTTCACACAGGCATAAAACCTTTTAAGTGTAGTGACT  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  GTGGTAAAACCTTCAACCGCAAAGACGCACTTGTTCTACACCAGAGGATTCACACTGGAGAAAGGCCTTACGAG  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  TGCAGCAAATGTGGTAAAACCTTCAGTGTTCTGTCTACCCTCATTCGGCACCGGAAAGTGCACATTGGAGAAAG  1036

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1037  GCCCTATGAGTGTACAGAATGTGGGAAGTTCTTTAAATACAATAATAGCTTCATTCTTCACCAGAGAGTTCACA  1110

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1111  CTGGAGAAAGGCCTTTTGAATGCAAGCAATGTGGGAAAGGCTACGTGACCCGTTCAGGCCTCTATCAGCACTGG  1184

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1185  AAAGTCCACACTGGGGAACGGCCCTATGAATGTAGCCTGTGTGGGAAAACCTTCACTACCAGATCCTACCGCAA  1258

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1259  TCGGCACCAGCAGTTCCACACTGAAGAGAGGTCTTATGAATGTACAGAGTGTGGGAAGGCCTTCAAACATAGTT  1332

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1333  CCACCCTCCTTCAGCACAAGAAAGTCCATACTCCAGAAAGGCGTCAGGAGGACAGGGCACATGGGAAGGTCGTT  1406

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1407  AGCTGCTAGCACCGTGTTCATCAGGAAAGGTCTTATTCCAGAAAGGAGGTTAAGGAGAGTGGCCGTGAGAGTGC  1480

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1481  CATCCGAAAGAAGCTAAACCTTGCACATCCCAACACCCACCCCAGGGAGAGTTCCCGTGTGTGCCTGGTGTGTG  1554

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1555  GGACGCTTTCGGGAGCCACATTGCACTCTGACTTGCCTGGGGCTGTTGGCAGTGTCACATCACTGAGTTTATCC  1628

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1629  ACCGCCATCCACCTCTATCCACCCCATAAGGTCCCTACAGCAAGTGGGACAGCAGACCTTGTGCTCCTTGCTCT  1702

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1703  AAACAGTAGAGAATCGTTAATAGTGGAGCCCAAAACAGGCCTCATTCCCTACCCTTGACTGGTTTAGCTGTGGA  1776

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1777  CATGACCCACCTCTGGCCGGAGGAGCTGAGCTGGTATCTGCTGGGGGCTTCCTGGGAAGGTTTACCATTTTCAT  1850

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1851  GGAAATGGTTGACATTACACATGGTATTTGTCATGCCCTAGCATGGACTGTCTCATACTGCTCTGGACTATGTG  1924

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1925  GTAATAAAGGCTTTATTGTTTAAGCCGCTTAAAATTTTTTTTTTATTTTTTTTTTGAGATGGTCTTATTCTGTT  1998

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1999  GCCCAGGCTGGAATGCAGTGGTGCCATCATAGCTCACCACAGCCTTGAACTGCTGGTCTCAAGGGATCTTCCTG  2072

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2073  CTTCAGCCTCCTGAGTAGCTGGCACTACAGGTGTGCGCCATCACACCTGGCTAATTTTTTTTTTTCATTTGTGG  2146

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2147  ACAGGGTCTTGCTATATTGCCCAAGCTGGTCTCGAACTCTGAGCCTCAAGCTATCCTCCTGCCTTGGCCTCCCA  2220

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2221  AAGTGCTGGGAGCCACTGTGCCTGGCCTAGTTTTTTTAGAGACAGGGTCTCACAGTCTTGCCCAGGCTGGAGTG  2294

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2295  CAGTAGTGTGAAGCTAGCTCATTGCAGACTTGAACTACTGGACTCAAGTGATCCTCCTGCTTCAGCGTATTGAA  2368

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2369  TAGCTAGGATTGTACTTGTGTGGCACCACATCTGACTAATTTTAAAAATTTGTATAGAGACAGGATCTTGCTAC  2442

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2443  ATTGCCCAGGCTGGTCATGAACTCTTTGCCTCAAGCAGTCCTCTTGCCTCAGCCTTCCAAAGTGCTGGTATTAT  2516

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2517  AGTTGTGAGCCACTGTGCCCTGCCAAGTCTCTTTTAATATTGAGGTTCTGATCCCTGTGTGTGGAGAGATTGAG  2590

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2591  AATAGAATCCGGCACTATCACCGTAAGTTGAGGGAATGGCTTTTGTGGAGGTGGTCTCTTGAGTTTTTTCTGCC  2664

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2665  TCAGTGGGGATGGCAGGATGACAGAAAATACCTCTAGTCAAGGTTGGCCTAATTTGTATTGGCCCCTGAGTCCT  2738

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2739  CCAGGGAAAGACTTGTAGCCTGGATGTCAGGCTTTTTTGTGGGTCCAGAGCTCACCTTGCGGAAGGGAATAGTT  2812

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2813  GGTGAGAGATCTTCTATATGTTTATGGACATAAAAAGTTGGGTTCCTTGTTCCCAGGGAATGTTCCAGAACTTC  2886

Query    1  ------------------------------------------------------------------------AT  2
                                                                                    ||
Sbjct 2887  CAGCATTGGTCAGAAGGAGCTGTTTCCAGATTCAGCTCAAAAGTCATATTCTCCAAAATCTGGAACATGGAGAT  2960

Query    3  GGAGTCTCATTCTGTCGCCCAGACTGGAGTGAAGTGGCATGATCTCGGCTCACTGCA-ACCTCTGCCTCTCGAG  75
            |||||||||..|||||||||||.||||||||.|||||||.||||||||||||||||| ||| ||||||| |.||
Sbjct 2961  GGAGTCTCACACTGTCGCCCAGGCTGGAGTGCAGTGGCACGATCTCGGCTCACTGCACACC-CTGCCTC-CCAG  3032

Query   76  G-TCAAGCGATTCTCCTGCCTCGGCCTCCGGAGTAGCTGGGATTACAGGCACACGCAACCATGCCCGGCTAATT  148
            | |||..|.|||||||||||||.||||||..|||||||||||.|||||||||.|||.||||..||.||||||  
Sbjct 3033  GTTCACACCATTCTCCTGCCTCAGCCTCCTAAGTAGCTGGGACTACAGGCACCCGCCACCACACCTGGCTAA--  3104

Query  149  TTTTTTGTATTTTTAGTAGAGATGGGGTTTCACCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAAG---  219
            |||||||||||||||||||||.||||.||||||||||||.||||||.|||||||||.||||||||||||.|   
Sbjct 3105  TTTTTTGTATTTTTAGTAGAGGTGGGTTTTCACCATGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATC  3178

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3179  TGCCTGCCTCAGCTTCCCAAAGTGCTGGGATTATAGGCATGAGCCACTGTGCCCGGCCAAGAAACCTTTTCTGG  3252

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3253  AAAGCTCCAGAAGACACCAGCTCAGATCTTAGCAAGAATTGTCATACCAAAATCTAAAGCCATCAGTGGGAAAG  3326

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3327  AAAATGAAGGTACTCAAAGCCTATGTAATTCTCTCTAGAGAATGGAAAAGGGAGTATAGTCTGCTTTCCCTTAG  3400

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3401  CACAGTGAGGGAGACTGATACATATCATGAGATCTTGCCAGGTGGCAGAGATGAGACAGTATGGCAGGCAGCTT  3474

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3475  TGGACATGGCTTCCAATGATCTCTGCCCTCTGGTATTCATGCTCTTGTGTAATGCTCTCCCCTTGACTGTGGGC  3548

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3549  TGGACCAAGTGACTTGCTTCTAACTAAATTTAGCAAAGATGATGGGATCTCACTTCTGTTATTAGGTTACAAAT  3622

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3623  GACTGACTTGTTGGTATTCTCCACTGCATGATCAGCTTGCAAGCTTTGATTGACAAGCTGCCATTTTGGAGAGG  3696

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3697  CCCATGTGGCAGAGAACTGGAGGAGGTCTCAGACCAACAGACGGGTCCTCAGTCCAGCAGCCCACAAAAAACTG  3770

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3771  AATGCTGCCAATTACATGAGTTTGCTTGGAAGCAGAGCCTTCCCTAGTCAAGCCTTCAGATGATACACCCCCAG  3844

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3845  CTGACATCTTGATGTTAGCCTTGTGAGAAACCCTAAAGAGGAGTCAGCTAGCTGCACCAAAGTTCCTGACCTAT  3918

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3919  AGAGACTGTGAAATAGTGACTATTGTTTTAAGCCACTAGGTTTTGAGTAATTTGTTACACAGCAATAGGTAACT  3992

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3993  AATACAGATGGCTTCTGCAATAGCAGTAATACAGTGCCGCCTAAGATTCTGGGAGCTGTGGCTTTCCCACATTT  4066

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 4067  GTTGCCCATAACTCTCTTGTGAATTCTCTGGTGATTTTTCTTAAAAGGGGGTGTCTATAGCTGAAGGCTTTCCC  4140

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 4141  ATTTTCACTGCATTTGTAATGCCTTTTTCCCATAGGTACTTTATATAGCTTTCTCACATAGGAGAGGTGACTGA  4214

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 4215  AGACCATCCCACATTCCTTAGATGCAGGGGTTTTCTCTACTGTGAATTTTTTGGTTATAGATAAGAATCGATTT  4288

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 4289  CTTCTTGAGGGTCTTTCTTCATACCAAGTATTTAAAGATCTCTCTTCAGTGTGGGTTCTTAGGTGGTTGAAGAG  4362

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 4363  GGCAAAAGTCTTCATGTCTTCCCATAGCCACTGCTCTTGAAGGGCTTCTCCCTATCATGGCCTGCCCGGTGTTA  4436

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 4437  TCTGATGTTAGAGCTGTGTGGCAGCATCTTCTCACTCAGCTCTTCTTCATGGCTTCCCTGTGCCATGAGTACTC  4510

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 4511  TGGTGATGGAGAAAGGAAGGCCTTTCCACATTCTCTTTTGAGCTTCTCATTATTCTGGTACTCCAGTGCTGGAA  4584

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 4585  GGGGGTAGTTACCCTGGAAAGCCTTCACAAATGCCTGGCCCTTGAGTCCTCTCACTTATGAATTTTGCTGTGCA  4658

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 4659  TGAACTGAAAAGTGCTCTTACTGTGAGCCATGTCACATCTGAAAAGGTGGTCTTCACCATAAATGGTCTACTGT  4732

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 4733  TGGTGAAGGTTTGATCCACTCCCTTGTGTGGGGTTTCTACCTGGAGTACACTGCCTAACGTTCAGCCAGGAGTA  4806

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 4807  CAATCTTTGGCAGGGCAAGGGTGCCATGGTCAGGGTGAGGAACGACCAGTCATGGAGTACTGGTCCTGTCACAT  4880

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 4881  ATCCCACTACTGAGCCTGTTAGGTGACATTCACATAGGCAGGGAGAACAGAGAGGGATCTAGGACAGATGTGGA  4954

Query  220  --------------  219
                          
Sbjct 4955  AGCAGCAGTGGCTA  4968

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