Nucleotide Global Alignment

Description

Query:
TRCN0000478282
Subject:
XR_002958934.1
Aligned Length:
4165
Identities:
185
Gaps:
3956

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  CCCGGGGAGGGGGAGGGGGAGGCGGAGGGGGAGGGGCAGAAGAAGGGGGCAAGGAGGGCAGAGAGATGAGCGAG  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  AAAGAAAGGAGGGGTGCGGGAAAGGAGGAGAGGAAGGAGCGGTGGGAGGAGGAGGAGGGGTGCGGGAGAGAAGG  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  GCTGAGGGAGAGGCGGAGGGAAACCGCACCCCTGCCTCTTTCCTGGGCCGAGGCCAGCCGGGGAGGAAATGTTG  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  AAATGGGCGAAGTGCACATCCGCCTCCAGGCCTAAGGGGTGTACGGGTCAGGCCGCACCGACCCCGCCCTTCCC  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  AGCCCTTCCTGCCAGACCTCTGCCTCCGATGGGCGAGCCCGGTTGCTGGGAGGCGGTTCACTATGGAGCCTGGA  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  CCCTCCCCACAGTTCAGCCCGCCGGAGGCGTGTGCGCTTCCAGATGAGAGCACTTGTTCACTGAATGACCGCAG  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  CCATTGTTAATGGGTGCGTGTGTACAGTTCTGGGCACATACCAACATGCACGGATGCATGTTAACCTGCTTTGT  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  ATGGAAGAAACGGGGTCAGGATATCATAAAAAGAATTAATGGGTAATCAGTATTCATCAAATGCCAAGATCTAG  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  TTCTGAGCACTTTGCAAATATTAATTTAATCACCACGAACCTCAGTAAAGTTTATTACTATTACTCGCATTTTT  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  CAGATGAGGCGCCTAAGGCACAGAGAGGTTAAGTAGCCTGCCCAGGATCACACAGCTACTAAGTACAGAAGTCA  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  GAATTTGAGCCTGACTCCAGAGCTCATAAGGTTAACAACGAGGCCTCCCACTTTTATATGCGTATTATTCCATG  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  AATTACTGTTTACACTAAGAATATGTTCTTTTCTGCAACCAATGGAAGATTCCTAGAAGAGGAACTACTGGCTA  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  TGTGGCATTGAGATTTTTCTTTTTTCTTTTTTTTTCTGAGATGGAGTCTAGCTCTGTCGCCCAGGCTGGAGTGC  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  AGTGGCACGATCTCAGCTCACTGCAACCTCCGCCTCCTGGGTTCAAGCGGTTCTCCTGCCTCAGCCTCCCAAAT  1036

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1037  ATCTGGGATTACAGGCCTGCCACTATGCCCAGCTGATTTTTGTATTTTAAGCAGAGATAGGGTTTCACTGTGTT  1110

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1111  GGCCAGGCTGGTCTTGAACTCCTCACATTGTGATCCACCCGCCTCGGCCTCCCAAAGTTCTGGGATTACAAGCG  1184

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1185  TGAGCCACCGCGCCTGGCCGTGTGTTTGAGATTCCTAGAGACATTAGTAAAACCCTCCAAAAGAGTGGGGACCT  1258

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1259  TACACCAGCCTGCCGGTTCAAGCTCCATACTGGACCTCCACCTCCCCAACCCCCACCCCCACCCCACCAGAAAA  1332

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1333  GGACCCTCCATCCCCTTCAGGTCATAGAGTGAGGAAGAGGGAAGCTTCAACAGGCCCAGATGGCCCTGGTAATG  1406

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1407  GGCACGGTGACATTTGGGCAGAGAACCCCAGGGCCCTGCATCTGCAGACCTGGGACAGGCAGAGAATGTCCAAT  1480

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1481  GGGGGTGCTAGTGGCATTGCCTGGCCATGACTCTGTCCAGCTGTGGCATCATGTCCCATGGCCAAAGTGTCCAA  1554

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1555  GCAAGCCTGCTTCTGCCATTGACCTAGGGAGGCCTCTTGACACCTGCTCATTTTCCAAGCCTGTTCCTCCTGCA  1628

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1629  TCCTCAAGATTCGGAGTGCCCTCCAAAATAAGATCTTTTTCTGTAGTTGTTACTATGGGTTAAGAACCCTCCTG  1702

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1703  TCTGATACATACAACTGATTACAAACTTTTAATTTTTGCCAATCTGATAAGCAAAAAAAAAGAAAGTAGTTCAT  1776

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1777  GGATTTAGTTTACATTTCCTTTTTAACAGGGAGGTTGGGTAGAGACTTCTTGGTTTGCTCATGCCTGTAATCCT  1850

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1851  AGCACTTTGGGAGGCTAAGGTAGGAAGATCGCTTGAACTCAGGAATTCAAGCCAACCTGGGCAACATAGCAAGA  1924

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1925  CCTCACCTCCACTAAAGGGAAAAAACAATCCATGTTCCTTTTCTTCCAACCCAACAGATCTGTGGCTGGGCAGC  1998

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1999  AGCTGCTGAGCTCAACTACAATTCCAGCCTGCTTTACAGTTAGGCTTGTCCACAGGACCAAGTTCTCAGTGACA  2072

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2073  GAGTAAGAGCAGGCCTGTGATAGGAGCCTCTTCTGTACCTCGGCCTCCAAGATGCCTAGAATCTGGCTGTGGCA  2146

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2147  GTGCCCAAGGGGAGGCGAGCAGCAGGAGAGAAGGGTCCTGGGGTTTGGGGGGACCAGGAGGAGCAGAGCTGCTG  2220

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2221  CTCAGCTCAGATCCATAACCTGAGAAAGAAAGAGGGATGGCACATTTTATGTGTTAACTTAAATATCTGGCTAC  2294

Query    1  ---------------------------------------------------------------------ATGG-  4
                                                                                 ||.| 
Sbjct 2295  ATCGCTCAGATATTTGATTAGACACTATTCTAGATGTTTTTATGAAGGTATTGATTAATTGATTGATTGATTGA  2368

Query    5  ---AGTCTCATTCTGTCGCCCAGACTGGAGTGAAGTGGCATGATCTCGGCTCACTGCAACCTCTGCCTCTCGAG  75
               |||||||.|||||.||||||.||||||||..||||||..||||.||||||||||||||||..|||| |.||
Sbjct 2369  GACAGTCTCACTCTGTTGCCCAGGCTGGAGTGCGGTGGCACAATCTTGGCTCACTGCAACCTCCACCTC-CCAG  2441

Query   76  G-TCAAGCGATTCTCCTGCCTCGGCCTCCGGAGTAGCTGGGATTACAGGCACACGCAACCATGCCCGGCTAATT  148
            | |||||.|||||||.||||||.||||||..|||||||||.||||||||||...||.||||||||.||||||  
Sbjct 2442  GTTCAAGTGATTCTCGTGCCTCAGCCTCCCAAGTAGCTGGCATTACAGGCATGTGCCACCATGCCTGGCTAA--  2513

Query  149  TTTTTTGTATTTTTAGTAGAGATGGGGTTTCACCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAAG---  219
             ||||||||||||||||||||||||||||||||||||||||||||||||||      ||||||||||.|||   
Sbjct 2514  -TTTTTGTATTTTTAGTAGAGATGGGGTTTCACCATGTTGGCCAGGCTGGT------CTCCTGACCTGAAGTGA  2580

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2581  TCTGCCCACCTTGGCTTCCCAAAGTGCTGGGATTACAGGCCTGAGCTACCACAACCGGTGAAAGTACTTTTTAA  2654

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2655  GATAAGATTAGCATTTAAATCAGAAGATTTTGAGTAAAGCAGATTATTCTCCACAATGTGGGCAGATCTCATCC  2728

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2729  CATCAGTTGAAGACCTTAAGAGAAAAGAGACTGACCTGCTCTGAGCAAGGAGGAATTCTGCTGGCCAACTGCTT  2802

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2803  GTGAACTCCAACTTGTAATATCAGTCTCCAGCCTACCGGCTTACTCTGCAGATTTTGGATTTGCCAAGCCTCCA  2876

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2877  CAACCGCAGAAGCCAATTCCTTAAAATAAATCCCTTACAACAGTTCCCTAAAATAAATTCTTCAAAATTCCTTA  2950

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2951  AAATAAATGTGTGTGCATGTGTGTCTGTGTATATATATAGCCTATGTAATGTCTAATATAGATCTATAATATAT  3024

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3025  ATTAGATAAATATACACATACTTATCATATATATATGTGTGTGTGTGTGTGTGTGTGTTTCTCCTATTGGTTCT  3098

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3099  GTTCTCTGGAGAACCTAATACAGAAACAAATCTGTTTATTCTTCTAGCCTCTGTATCATCAGGCCTCTTTGTTA  3172

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3173  GAGCAGGTGAGCTTTACCCTAACTAATTCAGAGGTTGATTCGTTTTCATGCATGTAGATACTTGTCATTTAGCT  3246

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3247  TCTATTATCTGCCTGTATTTTAAGGTTCTTTGTCTTAAAATGTTATGACTCCAGGAATGTTATATATTAAGTAT  3320

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3321  ATTAACCTTTTGACTATTATATATCTTGCAAACATCTTGTAATCAGTCACTTGTCTCTTTATTTTATTTGGAGC  3394

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3395  GGCTTTCAACCTAGAGCAGTGGTCCCCAAACCCGGGGCTGCAGACTATTCCCTGTCTGTGGTTTGTTAAGAACC  3468

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3469  AGGCTACATAGCAGAAGATGAGTAGCAGGCGCGGGAGCATGACCACCTGAGCTCCGCCTCCTGTCAGACCAGCA  3542

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3543  GCGACATTAGATTCTCATAGGAGCACAAACCCTACTGTGAACTGTGCGTATGAGGGATCTAGGTTGCACATTCC  3616

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3617  TTAAAAGACTCTTAATGCCTGATGATCTGAGGTGGAACAGGTTCACCCTGAAACCATCCCCCGCTCAGCCTGTG  3690

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3691  TCTGTGGAAAAATTGTCTTCCATGAAACTGGTCCCTGGTGCCAAAAAGGCTGGGGACTGCTGACCTACAAGATA  3764

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3765  TATTAGTTATGACTCTTGGTGCATACTCTTGACAGAAATCCCACTCAACCTAGTATAATGCAGAGGACAGTTCA  3838

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3839  CGGAGCAACTCAAATAATTGCCACTTTTACAATATTGAAGCTTCCTACGGGAAACATAATACATCTCTCAATTT  3912

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3913  ATGTCCTTTAATACGATTAAACATTTTTCTTCATGTAGGTTCTCCAGAATTTTGGTTATGCCTATGCCTAGATT  3986

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3987  ATTTATGATTGTTGTTGGTATTGCAAATGTCCTCTCCTATTGATTATTTAATGGTATCTATGGAAAGTATTGAT  4060

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 4061  TTTTGTGTATTTGCTCTGTGCCCACTTGCCATCTAACTGGTTGTTATATTTTATTGAACCTTTCAAAGGATATG  4134

Query  220  ---------------------  219
                                 
Sbjct 4135  AATTATGCTGATTTTAATGTC  4155

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