Nucleotide Global Alignment
Description
- Query:
- TRCN0000478282
- Subject:
- XR_002959009.1
- Aligned Length:
- 4165
- Identities:
- 185
- Gaps:
- 3956
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 CCCGGGGAGGGGGAGGGGGAGGCGGAGGGGGAGGGGCAGAAGAAGGGGGCAAGGAGGGCAGAGAGATGAGCGAG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 AAAGAAAGGAGGGGTGCGGGAAAGGAGGAGAGGAAGGAGCGGTGGGAGGAGGAGGAGGGGTGCGGGAGAGAAGG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GCTGAGGGAGAGGCGGAGGGAAACCGCACCCCTGCCTCTTTCCTGGGCCGAGGCCAGCCGGGGAGGAAATGTTG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 AAATGGGCGAAGTGCACATCCGCCTCCAGGCCTAAGGGGTGTACGGGTCAGGCCGCACCGACCCCGCCCTTCCC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 AGCCCTTCCTGCCAGACCTCTGCCTCCGATGGGCGAGCCCGGTTGCTGGGAGGCGGTTCACTATGGAGCCTGGA 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CCCTCCCCACAGTTCAGCCCGCCGGAGGCGTGTGCGCTTCCAGATGAGAGCACTTGTTCACTGAATGACCGCAG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CCATTGTTAATGGGTGCGTGTGTACAGTTCTGGGCACATACCAACATGCACGGATGCATGTTAACCTGCTTTGT 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 ATGGAAGAAACGGGGTCAGGATATCATAAAAAGAATTAATGGGTAATCAGTATTCATCAAATGCCAAGATCTAG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 TTCTGAGCACTTTGCAAATATTAATTTAATCACCACGAACCTCAGTAAAGTTTATTACTATTACTCGCATTTTT 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 CAGATGAGGCGCCTAAGGCACAGAGAGGTTAAGTAGCCTGCCCAGGATCACACAGCTACTAAGTACAGAAGTCA 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 GAATTTGAGCCTGACTCCAGAGCTCATAAGGTTAACAACGAGGCCTCCCACTTTTATATGCGTATTATTCCATG 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 AATTACTGTTTACACTAAGAATATGTTCTTTTCTGCAACCAATGGAAGATTCCTAGAAGAGGAACTACTGGCTA 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 TGTGGCATTGAGATTTTTCTTTTTTCTTTTTTTTTCTGAGATGGAGTCTAGCTCTGTCGCCCAGGCTGGAGTGC 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 AGTGGCACGATCTCAGCTCACTGCAACCTCCGCCTCCTGGGTTCAAGCGGTTCTCCTGCCTCAGCCTCCCAAAT 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 ATCTGGGATTACAGGCCTGCCACTATGCCCAGCTGATTTTTGTATTTTAAGCAGAGATAGGGTTTCACTGTGTT 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 GGCCAGGCTGGTCTTGAACTCCTCACATTGTGATCCACCCGCCTCGGCCTCCCAAAGTTCTGGGATTACAAGCG 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 TGAGCCACCGCGCCTGGCCGTGTGTTTGAGATTCCTAGAGACATTAGTAAAACCCTCCAAAAGAGTGGGGACCT 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 TACACCAGCCTGCCGGTTCAAGCTCCATACTGGACCTCCACCTCCCCAACCCCCACCCCCACCCCACCAGAAAA 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 GGACCCTCCATCCCCTTCAGGTCATAGAGTGAGGAAGAGGGAAGCTTCAACAGGCCCAGATGGCCCTGGTAATG 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 GGCACGGTGACATTTGGGCAGAGAACCCCAGGGCCCTGCATCTGCAGACCTGGGACAGGCAGAGAATGTCCAAT 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 GGGGGTGCTAGTGGCATTGCCTGGCCATGACTCTGTCCAGCTGTGGCATCATGTCCCATGGCCAAAGTGTCCAA 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 GCAAGCCTGCTTCTGCCATTGACCTAGGGAGGCCTCTTGACACCTGCTCATTTTCCAAGCCTGTTCCTCCTGCA 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 TCCTCAAGATTCGGAGTGCCCTCCAAAATAAGATCTTTTTCTGTAGTTGTTACTATGGGTTAAGAACCCTCCTG 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 TCTGATACATACAACTGATTACAAACTTTTAATTTTTGCCAATCTGATAAGCAAAAAAAAAGAAAGTAGTTCAT 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 GGATTTAGTTTACATTTCCTTTTTAACAGGGAGGTTGGGTAGAGACTTCTTGGTTTGCTCATGCCTGTAATCCT 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 AGCACTTTGGGAGGCTAAGGTAGGAAGATCGCTTGAACTCAGGAATTCAAGCCAACCTGGGCAACATAGCAAGA 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 CCTCACCTCCACTAAAGGGAAAAAACAATCCATGTTCCTTTTCTTCCAACCCAACAGATCTGTGGCTGGGCAGC 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 AGCTGCTGAGCTCAACTACAATTCCAGCCTGCTTTACAGTTAGGCTTGTCCACAGGACCAAGTTCTCAGTGACA 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 GAGTAAGAGCAGGCCTGTGATAGGAGCCTCTTCTGTACCTCGGCCTCCAAGATGCCTAGAATCTGGCTGTGGCA 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 GTGCCCAAGGGGAGGCGAGCAGCAGGAGAGAAGGGTCCTGGGGTTTGGGGGGACCAGGAGGAGCAGAGCTGCTG 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 CTCAGCTCAGATCCATAACCTGAGAAAGAAAGAGGGATGGCACATTTTATGTGTTAACTTAAATATCTGGCTAC 2294
Query 1 ---------------------------------------------------------------------ATGG- 4
||.|
Sbjct 2295 ATCGCTCAGATATTTGATTAGACACTATTCTAGATGTTTTTATGAAGGTATTGATTAATTGATTGATTGATTGA 2368
Query 5 ---AGTCTCATTCTGTCGCCCAGACTGGAGTGAAGTGGCATGATCTCGGCTCACTGCAACCTCTGCCTCTCGAG 75
|||||||.|||||.||||||.||||||||..||||||..||||.||||||||||||||||..|||| |.||
Sbjct 2369 GACAGTCTCACTCTGTTGCCCAGGCTGGAGTGCGGTGGCACAATCTTGGCTCACTGCAACCTCCACCTC-CCAG 2441
Query 76 G-TCAAGCGATTCTCCTGCCTCGGCCTCCGGAGTAGCTGGGATTACAGGCACACGCAACCATGCCCGGCTAATT 148
| |||||.|||||||.||||||.||||||..|||||||||.||||||||||...||.||||||||.||||||
Sbjct 2442 GTTCAAGTGATTCTCGTGCCTCAGCCTCCCAAGTAGCTGGCATTACAGGCATGTGCCACCATGCCTGGCTAA-- 2513
Query 149 TTTTTTGTATTTTTAGTAGAGATGGGGTTTCACCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAAG--- 219
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||.|||
Sbjct 2514 -TTTTTGTATTTTTAGTAGAGATGGGGTTTCACCATGTTGGCCAGGCTGGT------CTCCTGACCTGAAGTGA 2580
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2581 TCTGCCCACCTTGGCTTCCCAAAGTGCTGGGATTACAGGCCTGAGCTACCACAACCGGTGAAAGTACTTTTTAA 2654
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2655 GATAAGATTAGCATTTAAATCAGAAGATTTTGAGTAAAGCAGATTATTCTCCACAATGTGGGCAGATCTCATCC 2728
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2729 CATCAGTTGAAGACCTTAAGAGAAAAGAGACTGACCTGCTCTGAGCAAGGAGGAATTCTGCTGGCCAACTGCTT 2802
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2803 GTGAACTCCAACTTGTAATATCAGTCTCCAGCCTACCGGCTTACTCTGCAGATTTTGGATTTGCCAAGCCTCCA 2876
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2877 CAACCGCAGAAGCCAATTCCTTAAAATAAATCCCTTACAACAGTTCCCTAAAATAAATTCTTCAAAATTCCTTA 2950
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2951 AAATAAATGTGTGTGCATGTGTGTCTGTGTATATATATAGCCTATGTAATGTCTAATATAGATCTATAATATAT 3024
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3025 ATTAGATAAATATACACATACTTATCATATATATATGTGTGTGTGTGTGTGTGTGTGTTTCTCCTATTGGTTCT 3098
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3099 GTTCTCTGGAGAACCTAATACAGAAACAAATCTGTTTATTCTTCTAGCCTCTGTATCATCAGGCCTCTTTGTTA 3172
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3173 GAGCAGGTGAGCTTTACCCTAACTAATTCAGAGGTTGATTCGTTTTCATGCATGTAGATACTTGTCATTTAGCT 3246
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3247 TCTATTATCTGCCTGTATTTTAAGGTTCTTTGTCTTAAAATGTTATGACTCCAGGAATGTTATATATTAAGTAT 3320
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3321 ATTAACCTTTTGACTATTATATATCTTGCAAACATCTTGTAATCAGTCACTTGTCTCTTTATTTTATTTGGAGC 3394
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3395 GGCTTTCAACCTAGAGCAGTGGTCCCCAAACCCGGGGCTGCAGACTATTCCCTGTCTGTGGTTTGTTAAGAACC 3468
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3469 AGGCTACATAGCAGAAGATGAGTAGCAGGCGCGGGAGCATGACCACCTGAGCTCCGCCTCCTGTCAGACCAGCA 3542
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3543 GCGACATTAGATTCTCATAGGAGCACAAACCCTACTGTGAACTGTGCGTATGAGGGATCTAGGTTGCACATTCC 3616
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3617 TTAAAAGACTCTTAATGCCTGATGATCTGAGGTGGAACAGGTTCACCCTGAAACCATCCCCCGCTCAGCCTGTG 3690
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3691 TCTGTGGAAAAATTGTCTTCCATGAAACTGGTCCCTGGTGCCAAAAAGGCTGGGGACTGCTGACCTACAAGATA 3764
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3765 TATTAGTTATGACTCTTGGTGCATACTCTTGACAGAAATCCCACTCAACCTAGTATAATGCAGAGGACAGTTCA 3838
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3839 CGGAGCAACTCAAATAATTGCCACTTTTACAATATTGAAGCTTCCTACGGGAAACATAATACATCTCTCAATTT 3912
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3913 ATGTCCTTTAATACGATTAAACATTTTTCTTCATGTAGGTTCTCCAGAATTTTGGTTATGCCTATGCCTAGATT 3986
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3987 ATTTATGATTGTTGTTGGTATTGCAAATGTCCTCTCCTATTGATTATTTAATGGTATCTATGGAAAGTATTGAT 4060
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4061 TTTTGTGTATTTGCTCTGTGCCCACTTGCCATCTAACTGGTTGTTATATTTTATTGAACCTTTCAAAGGATATG 4134
Query 220 --------------------- 219
Sbjct 4135 AATTATGCTGATTTTAATGTC 4155
