Nucleotide Global Alignment
Description
- Query:
- TRCN0000478282
- Subject:
- XR_002959636.1
- Aligned Length:
- 3204
- Identities:
- 178
- Gaps:
- 2999
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 TCCATTTCACAGATAAGCAGATAGAGGTCCGAAAAGATTGCAGTTTGAGTCCCAGTGCTTAGGTGACGTCCACC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GCTCCTCGGGTACAGGAAAAAGAAGGAAAGGGGAAATGGACGGAAGGGTAAACAAGACTCCGAAGACCCGGGTG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 AGCAAGGGTTCCCAGGCAGCACTGTTCCCCGGCACCAGCTGAGTCCACCTCTCTCCGCCCCCTCAGCGCACGGC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 TGAGCCTTGGTCTTTCATCTCTCCAGCCAAGCCCTGGGTTAGCACAGCTGGTTCAATGAAGGAATGCGAAGCCA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GAGGCCCTACAAGCTACACCAGCAAAGTGCTGGGACCGCTCGACCCCTACGTGCCCCGCGCCCCTTCCCAGCGT 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CCCCCGGGCCGGGAAGTCCCGGTACCACCCCCGCCCACATGCGCCGGCTGGGCCTGGCGGCCTCCCCCGGAAAC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 GTTCCCCCATCCTCGCCCGGCGCCTCACTCACCAAGGGCCGCGCCGGGGTTCTGCACTGTCACTGCGCTGCGGT 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 TCCCCGCCTTAGGGATTCTCACACGGTTCCACGGCTCCAGGCCCGGCGGCACCGCAGCCATCATGCGAGGCGGG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 GGGACTTACGAAAGGCGGAGCTACGCGAGAGCACGTCCAGCGACCGGAGTCTGGAACAGTTCCTCGTTCTTTCT 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 CTGGCTCTGGATCTGCGTCCCTGACAGTCTTAAAGAGGACAGACCTTTCATTCATGAGGATGACCCTCAACTTG 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 GCCCAGTCCATGTTTCCTCAGACTCAAGCCTTGCATTCCTGGCAGAAAGACTGAAGAAATGATGCTGTGCTCTT 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 CTCAGTGCTTCGCGTCAGGAGGCTCTACTCTCTCAACCGGCCCCACTATTGTCTCTTGAAGGTGCAGCTGTGTG 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 GCTTGGCCATGAGGATCGGAGAGGATATAAAGAGGGCAGGAGAGGGGACGACTCCCATTTTGCCACCCTGGCAG 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 CTCTCAACCGGCTCTGCTCCAGCCAACTCTTCACAGTACTTAAAGTCCTTTTTCAACGCCACGAAGTGATGCTC 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 TCACCGGGTTCAGATGAGCTCATCTCCTCTCTAACTACACTAAAGTGCCTCGAGGGCTGGAACACTGCCTCATG 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 CTTCTCCATCCCTGACATGCTCAAGCCCAATGCTGATACAGTGCTCAGTAAATTATTGTCGTTTGGTTGATTTG 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 CAACAAGTGCTTTTTAAATTGGAATGCTCAGGGTTGAAATAGTCCCTCAGTTGTTCCAGATCACCATTTTTTTT 1258
Query 1 --------------ATGGAGTCTCATTCTGTCGCCCAGACTGGAGTGAAGTGGCATGATCTCGGCTCACTGCAA 60
|.|||||||...||||||||||||.||||||||.||||||..||||||.|||||||||||
Sbjct 1259 TTTTTTTTTTTAAGACGGAGTCTTGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCGATCTCCGCTCACTGCAA 1332
Query 61 CCTCTGCCTCTCGAGGTCAAGCGATTCTCCTGCCTCGGCCTCCGGAGTAGCTGGGATTACAGGCACACGCAACC 134
.|||||||||.||.|.|||.||.|||||||||||||.||||||.||||||||||||.|||||||||.|||.|||
Sbjct 1333 GCTCTGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCTGAGTAGCTGGGACTACAGGCACCCGCCACC 1406
Query 135 ATGCCCGGCTAATTTTTTTTGTATTTTTAGTAGAGATGGGGTTTCACCATGTTGGCCAGGCTGGTCTCGAACTC 208
..|||.|||||||||||||||.||||||||||||||.||||||||||| .|||||||||.|||
Sbjct 1407 GCGCCTGGCTAATTTTTTTTGGATTTTTAGTAGAGACGGGGTTTCACC------------GTGGTCTCGATCTC 1468
Query 209 CTGACCTCAAG--------------------------------------------------------------- 219
|||||||| |
Sbjct 1469 CTGACCTC--GCCGGATCACCATTCTTAATTATCCTCCTCTTGCTGGTGTGCTACAGTTTCTGGATTCCCCCAG 1540
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1541 TCTAGATATATTAACCTCATGTGGCCTCACTGGACAGCCTCTTTGAGGCTGCCTTCATCAACACCTGTTACTCT 1614
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1615 GTTGCCCACTTCATTTTCCCCAGTCTGTTGTGTTGGCTCGACATCCCTGAGTCTTGCCCACTGTCTGCTGTCTT 1688
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1689 ATTCCTGTGTTTGTTCTGACTTGACAAATTACTCTCATCTCAACTACTGTGTAGCAATACTTTTTATTCAACTT 1762
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1763 TTACCAATTTCCTAATACCATGGTCAGTGCAAATATTCTCCATTCTTTGGCTTTACCTCAAGTTTCCATCCTAT 1836
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1837 TTTTTTTCTCTTTCCTAAAGAGAAGTCCATACATTCTAACTCTGTTATGACTTGCTTGCTCCTTAATCTCTTGT 1910
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1911 CATTTGGTTTCCACTCTTCATGCTGTGTTGTTCCCACTGGGAAAGGCACCATAGACTTGAAGAGTCTGTCCTTG 1984
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1985 ATCTTGTCTTGCATGGTTTCTCTGCAGCCTTTGGTGCTGTGGACCACTGCCTGGTCCTGACACTCCTTCTTGCT 2058
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2059 TTTGCTGCCTTAATGCTCCATGTGTCTGTTTCTTCTGCTACTGCTATTTCTCCATCCAGTCCTTTCTGAGATTC 2132
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2133 AGTCTCTGCTTGGTTTTCCTTAGAGGCAATTTTCACTCCCATGACTTCAATTATGGTCACCTCTATGCCAGGTC 2206
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2207 ACACTTCCAGTTGTCTACTGGATTTTTCTACTTGTCCATCCTACTATTATTAAAACTTGAGATATCTCAAACTG 2280
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2281 GATTTATTCCCCCTTCCAAAACTGCTTATTTTCTTCTACTAACTTCAAGGCTGAAGGTTTCTGCCCATCCATTG 2354
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2355 ATTGTAATCTTCCATCAGTCATTAAAGTACATGATTCCTTCAGATCTATTCTCTATCCCATCTATTTAGTTTCT 2428
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2429 GCCACCACCCTAATTCTAACCCTTTTGTCACATGTATAAACTATTGAAATTAATCTGTTAAAATACTTTTGCAA 2502
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2503 AAATGTACTCTTCTACTCAAAACATCCAGTAGTTCCCCATTATTTACAGAATCAAATCCAACCTTCTTCACCTA 2576
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2577 AGGTTCAAGACCTTCCTTAATCTAATCCCAACTTTGTTGTTCCCACCATTTCTTCCTCTATTATATTTGCCTTA 2650
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2651 AAGAAATAAATCAGTTTAGTGAAACTGTTCTGCTCATAAGATCCCAAACACTTTATATGCACACAGTTGTTCAT 2724
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2725 GTCCTTTCACCTACCTGCTACATCCATCCCTCATATTCCCATCTCTTCTGGCCTAACCTTCCTTCAAACCACCT 2798
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2799 TTCAAAAAAAGCTTCTTTGACCATCTCAATCTAAATTAACCTCTTCCTCCCATAAACTCCCTTTGACTCCATTA 2872
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2873 AGCTACTGACAGTTTATGAAATTATGTAAATTCCAGTTTATATGTTAAATGATTGCTTAATTTTTCTTACATTA 2946
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2947 TCTTTCTAACTAGATTGTTTGCTTCTTCTGGATTTGATCCCCCAGCTGGCACCTGGCTCAGACTTAATTAATGC 3020
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3021 TGCCTGTTCTTGTCTGAGTTTCCATGAACTTATAAATACAAGTTGTTTTTGTAAATTGAGTCCCAAACCCATAT 3094
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3095 GTTTATAAGAGCAAACACCTTGAGCAGGATTAACTATGTGCAGGTATGGATATTCTGTTGCATTTTTTTCTAAA 3168
Query 220 ---------------------- 219
Sbjct 3169 TAAAATCTTATTTATTGGCTAC 3190
