Nucleotide Global Alignment

Description

Query:
TRCN0000478282
Subject:
XR_243915.3
Aligned Length:
4313
Identities:
187
Gaps:
4098

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  TTGAAGAGGCTGAGGGAGGCGGTGTCGCCGCCGCGGCGCTGTCATGGAGCTAGCGCAGGAAGCGCGGGAACTGG  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  GTTGCTGGGCGGTCGAAGAGATGGGGGTGCCCGTGGCGGCCCGGGCCCCGGAATCGACGCTGCGCAGGCTGTGT  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  CTGGGCCAGGGGGCTGACATCTGGGCCTACATCTTGCAGCATGTGCACAGTCAGAGGACTGTCAAGAAGATCCG  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  GGGAAACCTACTCTGGTATGGCCACCAGGACAGTCCACAGGTCCGTCGGAAGTTAGAGCTGGAAGCTGCTGTGA  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  CCCGCCTGCGGGCAGAAATCCAGGAACTCGACCAGAGCCTGGAGCTGATGGAGCGAGACACTGAGGCTCAGGAC  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  ACGGCCATGGAGCAGGCACGTCAGCACACTCAAGACACCCAGCGTCGAGCTCTCCTCCTCCGGGCCCAAGCTGG  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  GGCCATGCGAAGACAGCAGCATACGCTCCGAGATCCCATGCAGCGGCTGCAGAATCAACTGAGGCGCCTGCAGG  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  ACATGGAGAGGAAAGCCAAAGTAGATGTGACCTTTGGATCCCTCACGTCGGCAGCTCTGGGCCTGGAGCCCGTG  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  GTCCTGCGTGATGTCCGAACAGCCTGCACCCTCCGGGCCCAGTTCCTGCAGAACCTCCTGCTTCCCCAGGCCAA  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  GAGGGGCAGCCTCCCAACCCCTCATGATGACCACTTTGGCACTTCGTACCAGCAGTGGCTGAGCTCAGTGGAGA  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  CGCTGCTGACAAACCACCCCCCAGGCCACGTCCTGGCTGCCTTGGAGCACCTGGCTGCAGAGCGGGAGGCAGAG  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  ATTCGGTCCCTGTGCAGTGGGGATGGGCTTGGCGACACAGAGATATCCAGGAGGGCTGGCGGACTGTGGGTGTG  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  CTGGTCTCCCAGCGGAGCACCCTCCTGAAGGAGCGGCAAGTCTTGACCCAGCGCCTCCAGGGCCTGGTGGAGGA  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  GGTGGAGAGACGCGTCCTGGGATCCAGTGAGAGGCAGGTGCTGATACTGGGGCTTCGGCGCTGTTGCCTGTGGA  1036

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1037  CGGAGCTCAAGGCCCTGCACGATCAGAGCCAGGAGCTGCAGGATGCAGCTGGGCATCGGCAGCTCCTGCTGAGG  1110

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1111  GAGCTACAGGCCAAACAGCAGCGGATCCTGCACTGGCGCCAGCTGGTGGAGGAGACCCAGGAACAGGTCCGCCT  1184

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1185  GCTCATCAAGGGAAACTCGGCCAGCAAGACCCGCCTGTGCCGGAGCCCGGGGGAGGTGCTAGCTCTGGTCCAGC  1258

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1259  GAAAGGTGGTCCCTACATTTGAGGCAGTGGCACCACAGAGCCGGGAGCTGCTGCGCTGTCTGGAGGAGGAAGTC  1332

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1333  CGGCATTTGCCCCACATTCTGTTGGGCACGCTGCTGCGGCACAGGCCGGGAGAGTGAGACTGGGGCTGCCCCAC  1406

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1407  CCCTGCCCTGCATCCCCTGCCATGGGTGACTGTCACTCCCTGAACCTCCTCAAAAAAGATAACCCCAGACCCCC  1480

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1481  AGTGTTCCCAGGCTGCCAGACCTCACCCTTGGGTCAGCAGCCCTGGTCTTGGCATCCTAGTCCCCAGACCCACC  1554

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1555  TTGAAGTTCCTGGGCCCCCAGAGCCTCCAGAACCCAAGGCCTCCTCTCAGTCCCCACCCAACCCAGACTTCTCC  1628

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1629  CCGCCCGTAGGTTGAAGCCCCTGCCCACGGTCCTCCCATCCATCCACCAGCTGCACCCCGCGTCCCCAAGGGGC  1702

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1703  TCCAGCTTCATAGCGCTGAGCCACAAGCTGGGGCTGCCTCCAGGGAAGGCCTCGGAGCTGCTCCTGCCGGCGGC  1776

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1777  TGCCTCTCTTCGCCAGGACCTTCTGCTCCTGCAGGACCAGCGGAGCCTCTGGTGCTGGGATCTACTCCACATGA  1850

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1851  AGACCAGCCTGCCGCCAGGCCTTCCCACCCAGGAGCTGCTGCAGATCCAGGCATCCCAGGAAAAACAGCAGAAA  1924

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1925  GAGAACCTGGGGCAGGCTCTGAAGAGGCTGGAGAAGCTACTGAAACAGGCACTGGAGCGAATCCCTGAGCTGCA  1998

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1999  GGGGATCGTGGGGGACTGGTGGGAGCAGCCAGGCCAGGCCGCCCTCTCTGAGGAGCTCTGCCAGGGCCTGTCCC  2072

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2073  TGCCCCAGTGGCGGCTGCGCTGGGTTCAGGCCCAGGGGGCCCTGCAGAAGCTGTGCAGCTGAAGAGAGGGTTCA  2146

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2147  AACGGAAGCCGAGAACTTGACACTGTTCACCCCAACACCTCACCTCCCCCAGGACATTTGGAAGAAAGCAGCGC  2220

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2221  CAGGATTCCTCGGCAGTCGTCCCCACCCGCACCTGCAGTCCCCTCATGTGCTGTTCTGCTGCCCCACTCAGCTC  2294

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2295  CTGGACCCTGTCCTTTCATCCCGCTAAAGCACCCCCTAAAACCCCTTCATCACTTTCATTCTCAGCAAAAAGTA  2368

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2369  ATTGAGCACCTCCTCTAGGCGCTGGGGAGTCCACACTGAACAAAAGAAACAGAAAACCCTGTCTTCCAGCAGTT  2442

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2443  GAGTTCTAGGGCAGGGAGACAGAGTTTACAAGATAAGGAAAATATATATGTAGTATGCTGCAAGTTAACTGCTG  2516

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2517  TGTGGGAAATCCAGCAGGGGGTGGGATGTGTGATTTGAATTGAGGGCCACACTGCCCAGGTCGTGCTCCGTCAA  2590

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2591  GGGGTGAGCAGGAGCAACAGGGGTGGCTGAGTAAGGGCTTGCAGCTGGAGGCAACAGCACATGCAAAGGCCCTG  2664

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2665  AGCCAGGATGTGCTGCAATAAGGGCCACTGAGGGGGACAGTGTAGGTTGGGGGTGAGGAATGTATTAAAAGATG  2738

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2739  AGATTGCCTTCTAGTTTGTATAGTTTCTTTTTTTACATGTAAATCAGCCATTTGGAATTTATCCTAGCACATGG  2812

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2813  ATCCAATTTTGTCTTATTTTACATATATCCTAGTAGCACTTACTGAAATTCCCAGTCAGAGTGGCAGTTGCCTC  2886

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2887  TGAGGGAAGGTGGGTGGCAGGGATCAACTGAGGAGGAGACACAGAAATGTCCTAGCTGATGGGAATGTGCTGTG  2960

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2961  TCAAGAGCAGCGGCGGTGACGCAGGTGTAGAGATTTGTCAGAGCTCATGTAGTTGTAGTCTTAAGGCCTGTGCA  3034

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3035  TTTCACTGCGTGGGTTACTCAATTTATAAAGCAAAGCCCTTACACTTTTGAGATGCCACCTTTTTATGCACTAA  3108

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3109  ATTTCCATGTTTAATTGGGTTATATCTGGCTTCTCTCCAGACCTGCTTTGTATTTAACTCTCCATGTGTCATTC  3182

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3183  CTACAGTAGCTTAATAGAAAGGCTTGTGACACATTGTCATATCTGTTCTTGTTTTCTTTTGTTTTTTTTTTTTT  3256

Query    1  ----------ATGGAGTCTCATTCTGTCGCCCAGACTGGAGTGAAGTGGCATGATCTCGGCTCACTGCAACCTC  64
                      |||.|||||||||||||.|||||...|||||||.||||||||||||||.|||||||||||||||
Sbjct 3257  TTTTTTTGAGATGCAGTCTCATTCTGTTGCCCAAGTTGGAGTGCAGTGGCATGATCTCAGCTCACTGCAACCTC  3330

Query   65  TGCCTCTCGAGG-TCAAGCGATTCTCCTGCCTCGGCCTCCGGAGTAGCTGGGATTACAGGCACACGCAACCATG  137
            .||||| |.||| ||||||.||||||.||||||.||.|||..|||||||.||||||||||.||.|.|.||||.|
Sbjct 3331  CGCCTC-CCAGGTTCAAGCCATTCTCATGCCTCAGCTTCCCCAGTAGCTAGGATTACAGGTACGCACCACCACG  3403

Query  138  CCCGGCTAATTTTTTTTGTATTTTTAGTAGAGATGGGGTTTCACCATGTTGGCCAGGCTGGTCTCGAACTCCTG  211
            |||.|||.|   ||||||||.|||||||||.||.|||||||||.||||||||||||.|||||||||||||||||
Sbjct 3404  CCCAGCTCA---TTTTTGTACTTTTAGTAGGGACGGGGTTTCATCATGTTGGCCAGACTGGTCTCGAACTCCTG  3474

Query  212  ACCTCAAG------------------------------------------------------------------  219
            ||||||||                                                                  
Sbjct 3475  ACCTCAAGTGATCTGCCTGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCATGAGCCACCGCGCCTGACCACA  3548

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3549  TTGCCATATCTGAAATGGCTGGATTCTCTTAGGTGCTTTTCTTTTTCTTTCTTTCTTTCTTTTTTTGAGACAGA  3622

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3623  ATCTGGCTGTTTCCCAGGCTGAAGTGCAGTGGCATGAACTCAGCTCACTGCAACCTCTGCCTCCTGGATTCAAA  3696

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3697  CAATTCTCATGTCTCAGCCTCCTGAATAGCTGGGATTACAGGCACCCACCACCATATCTGGCTAATATTTGTAT  3770

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3771  TTTTTGTAGAGTCGGAGCTTTACCATGTTGGTCAGGCTGCTCTCCAACTCCTGGCCTCAAGTGATTCTATCGCC  3844

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3845  TCTGCCTCCCAAATCTTCACCTGCTGGGATTAGTTTCCCCTGTCTCAGTAAATTTTTTTTCCCAAACTAAGTGA  3918

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3919  ACATTAGATTTAATTTGGCTGGCCCCAGAAGAAAAACATGCACAGATGGTAGTTTTACTGGTGTTGCAGTAAGT  3992

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3993  TTTCAAATTTGGAAGTTTGGCAGCTTTATGATCTTGAACCTTGCTGTCCATCTCTCACACAACTCCTCTCTTGG  4066

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 4067  CCTCCAGAGTCCCTTTACTCTCCCAGCTTTCCTCCTGCCCCTGGCTGCTGTTTCCCAGCCTTTCCACATTGGCT  4140

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 4141  TTCCCATGTAGTCCTTAGTGTGTCTGCTCCTCCTCTCTCTCCTCATCACAGTTCCCAGCCCCCACCTTCAACTG  4214

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 4215  AACTCAACAAAATCTTCAACTTCATACAGTAGTCACATTGTTAGTAATAACACTGGCATTTTTATTTTGATAAA  4288

Query  220  ---------------------  219
                                 
Sbjct 4289  ATAGACCGTTTAAATTTTTGA  4309

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