Nucleotide Global Alignment
Description
- Query:
- TRCN0000478282
- Subject:
- XR_243915.3
- Aligned Length:
- 4313
- Identities:
- 187
- Gaps:
- 4098
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 TTGAAGAGGCTGAGGGAGGCGGTGTCGCCGCCGCGGCGCTGTCATGGAGCTAGCGCAGGAAGCGCGGGAACTGG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GTTGCTGGGCGGTCGAAGAGATGGGGGTGCCCGTGGCGGCCCGGGCCCCGGAATCGACGCTGCGCAGGCTGTGT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CTGGGCCAGGGGGCTGACATCTGGGCCTACATCTTGCAGCATGTGCACAGTCAGAGGACTGTCAAGAAGATCCG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GGGAAACCTACTCTGGTATGGCCACCAGGACAGTCCACAGGTCCGTCGGAAGTTAGAGCTGGAAGCTGCTGTGA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CCCGCCTGCGGGCAGAAATCCAGGAACTCGACCAGAGCCTGGAGCTGATGGAGCGAGACACTGAGGCTCAGGAC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 ACGGCCATGGAGCAGGCACGTCAGCACACTCAAGACACCCAGCGTCGAGCTCTCCTCCTCCGGGCCCAAGCTGG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 GGCCATGCGAAGACAGCAGCATACGCTCCGAGATCCCATGCAGCGGCTGCAGAATCAACTGAGGCGCCTGCAGG 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 ACATGGAGAGGAAAGCCAAAGTAGATGTGACCTTTGGATCCCTCACGTCGGCAGCTCTGGGCCTGGAGCCCGTG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 GTCCTGCGTGATGTCCGAACAGCCTGCACCCTCCGGGCCCAGTTCCTGCAGAACCTCCTGCTTCCCCAGGCCAA 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 GAGGGGCAGCCTCCCAACCCCTCATGATGACCACTTTGGCACTTCGTACCAGCAGTGGCTGAGCTCAGTGGAGA 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 CGCTGCTGACAAACCACCCCCCAGGCCACGTCCTGGCTGCCTTGGAGCACCTGGCTGCAGAGCGGGAGGCAGAG 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 ATTCGGTCCCTGTGCAGTGGGGATGGGCTTGGCGACACAGAGATATCCAGGAGGGCTGGCGGACTGTGGGTGTG 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 CTGGTCTCCCAGCGGAGCACCCTCCTGAAGGAGCGGCAAGTCTTGACCCAGCGCCTCCAGGGCCTGGTGGAGGA 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 GGTGGAGAGACGCGTCCTGGGATCCAGTGAGAGGCAGGTGCTGATACTGGGGCTTCGGCGCTGTTGCCTGTGGA 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 CGGAGCTCAAGGCCCTGCACGATCAGAGCCAGGAGCTGCAGGATGCAGCTGGGCATCGGCAGCTCCTGCTGAGG 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 GAGCTACAGGCCAAACAGCAGCGGATCCTGCACTGGCGCCAGCTGGTGGAGGAGACCCAGGAACAGGTCCGCCT 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 GCTCATCAAGGGAAACTCGGCCAGCAAGACCCGCCTGTGCCGGAGCCCGGGGGAGGTGCTAGCTCTGGTCCAGC 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 GAAAGGTGGTCCCTACATTTGAGGCAGTGGCACCACAGAGCCGGGAGCTGCTGCGCTGTCTGGAGGAGGAAGTC 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 CGGCATTTGCCCCACATTCTGTTGGGCACGCTGCTGCGGCACAGGCCGGGAGAGTGAGACTGGGGCTGCCCCAC 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 CCCTGCCCTGCATCCCCTGCCATGGGTGACTGTCACTCCCTGAACCTCCTCAAAAAAGATAACCCCAGACCCCC 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 AGTGTTCCCAGGCTGCCAGACCTCACCCTTGGGTCAGCAGCCCTGGTCTTGGCATCCTAGTCCCCAGACCCACC 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 TTGAAGTTCCTGGGCCCCCAGAGCCTCCAGAACCCAAGGCCTCCTCTCAGTCCCCACCCAACCCAGACTTCTCC 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 CCGCCCGTAGGTTGAAGCCCCTGCCCACGGTCCTCCCATCCATCCACCAGCTGCACCCCGCGTCCCCAAGGGGC 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 TCCAGCTTCATAGCGCTGAGCCACAAGCTGGGGCTGCCTCCAGGGAAGGCCTCGGAGCTGCTCCTGCCGGCGGC 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 TGCCTCTCTTCGCCAGGACCTTCTGCTCCTGCAGGACCAGCGGAGCCTCTGGTGCTGGGATCTACTCCACATGA 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 AGACCAGCCTGCCGCCAGGCCTTCCCACCCAGGAGCTGCTGCAGATCCAGGCATCCCAGGAAAAACAGCAGAAA 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 GAGAACCTGGGGCAGGCTCTGAAGAGGCTGGAGAAGCTACTGAAACAGGCACTGGAGCGAATCCCTGAGCTGCA 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 GGGGATCGTGGGGGACTGGTGGGAGCAGCCAGGCCAGGCCGCCCTCTCTGAGGAGCTCTGCCAGGGCCTGTCCC 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 TGCCCCAGTGGCGGCTGCGCTGGGTTCAGGCCCAGGGGGCCCTGCAGAAGCTGTGCAGCTGAAGAGAGGGTTCA 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 AACGGAAGCCGAGAACTTGACACTGTTCACCCCAACACCTCACCTCCCCCAGGACATTTGGAAGAAAGCAGCGC 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 CAGGATTCCTCGGCAGTCGTCCCCACCCGCACCTGCAGTCCCCTCATGTGCTGTTCTGCTGCCCCACTCAGCTC 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 CTGGACCCTGTCCTTTCATCCCGCTAAAGCACCCCCTAAAACCCCTTCATCACTTTCATTCTCAGCAAAAAGTA 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 ATTGAGCACCTCCTCTAGGCGCTGGGGAGTCCACACTGAACAAAAGAAACAGAAAACCCTGTCTTCCAGCAGTT 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 GAGTTCTAGGGCAGGGAGACAGAGTTTACAAGATAAGGAAAATATATATGTAGTATGCTGCAAGTTAACTGCTG 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 TGTGGGAAATCCAGCAGGGGGTGGGATGTGTGATTTGAATTGAGGGCCACACTGCCCAGGTCGTGCTCCGTCAA 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 GGGGTGAGCAGGAGCAACAGGGGTGGCTGAGTAAGGGCTTGCAGCTGGAGGCAACAGCACATGCAAAGGCCCTG 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 AGCCAGGATGTGCTGCAATAAGGGCCACTGAGGGGGACAGTGTAGGTTGGGGGTGAGGAATGTATTAAAAGATG 2738
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2739 AGATTGCCTTCTAGTTTGTATAGTTTCTTTTTTTACATGTAAATCAGCCATTTGGAATTTATCCTAGCACATGG 2812
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2813 ATCCAATTTTGTCTTATTTTACATATATCCTAGTAGCACTTACTGAAATTCCCAGTCAGAGTGGCAGTTGCCTC 2886
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2887 TGAGGGAAGGTGGGTGGCAGGGATCAACTGAGGAGGAGACACAGAAATGTCCTAGCTGATGGGAATGTGCTGTG 2960
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2961 TCAAGAGCAGCGGCGGTGACGCAGGTGTAGAGATTTGTCAGAGCTCATGTAGTTGTAGTCTTAAGGCCTGTGCA 3034
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3035 TTTCACTGCGTGGGTTACTCAATTTATAAAGCAAAGCCCTTACACTTTTGAGATGCCACCTTTTTATGCACTAA 3108
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3109 ATTTCCATGTTTAATTGGGTTATATCTGGCTTCTCTCCAGACCTGCTTTGTATTTAACTCTCCATGTGTCATTC 3182
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3183 CTACAGTAGCTTAATAGAAAGGCTTGTGACACATTGTCATATCTGTTCTTGTTTTCTTTTGTTTTTTTTTTTTT 3256
Query 1 ----------ATGGAGTCTCATTCTGTCGCCCAGACTGGAGTGAAGTGGCATGATCTCGGCTCACTGCAACCTC 64
|||.|||||||||||||.|||||...|||||||.||||||||||||||.|||||||||||||||
Sbjct 3257 TTTTTTTGAGATGCAGTCTCATTCTGTTGCCCAAGTTGGAGTGCAGTGGCATGATCTCAGCTCACTGCAACCTC 3330
Query 65 TGCCTCTCGAGG-TCAAGCGATTCTCCTGCCTCGGCCTCCGGAGTAGCTGGGATTACAGGCACACGCAACCATG 137
.||||| |.||| ||||||.||||||.||||||.||.|||..|||||||.||||||||||.||.|.|.||||.|
Sbjct 3331 CGCCTC-CCAGGTTCAAGCCATTCTCATGCCTCAGCTTCCCCAGTAGCTAGGATTACAGGTACGCACCACCACG 3403
Query 138 CCCGGCTAATTTTTTTTGTATTTTTAGTAGAGATGGGGTTTCACCATGTTGGCCAGGCTGGTCTCGAACTCCTG 211
|||.|||.| ||||||||.|||||||||.||.|||||||||.||||||||||||.|||||||||||||||||
Sbjct 3404 CCCAGCTCA---TTTTTGTACTTTTAGTAGGGACGGGGTTTCATCATGTTGGCCAGACTGGTCTCGAACTCCTG 3474
Query 212 ACCTCAAG------------------------------------------------------------------ 219
||||||||
Sbjct 3475 ACCTCAAGTGATCTGCCTGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCATGAGCCACCGCGCCTGACCACA 3548
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3549 TTGCCATATCTGAAATGGCTGGATTCTCTTAGGTGCTTTTCTTTTTCTTTCTTTCTTTCTTTTTTTGAGACAGA 3622
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3623 ATCTGGCTGTTTCCCAGGCTGAAGTGCAGTGGCATGAACTCAGCTCACTGCAACCTCTGCCTCCTGGATTCAAA 3696
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3697 CAATTCTCATGTCTCAGCCTCCTGAATAGCTGGGATTACAGGCACCCACCACCATATCTGGCTAATATTTGTAT 3770
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3771 TTTTTGTAGAGTCGGAGCTTTACCATGTTGGTCAGGCTGCTCTCCAACTCCTGGCCTCAAGTGATTCTATCGCC 3844
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3845 TCTGCCTCCCAAATCTTCACCTGCTGGGATTAGTTTCCCCTGTCTCAGTAAATTTTTTTTCCCAAACTAAGTGA 3918
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3919 ACATTAGATTTAATTTGGCTGGCCCCAGAAGAAAAACATGCACAGATGGTAGTTTTACTGGTGTTGCAGTAAGT 3992
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3993 TTTCAAATTTGGAAGTTTGGCAGCTTTATGATCTTGAACCTTGCTGTCCATCTCTCACACAACTCCTCTCTTGG 4066
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4067 CCTCCAGAGTCCCTTTACTCTCCCAGCTTTCCTCCTGCCCCTGGCTGCTGTTTCCCAGCCTTTCCACATTGGCT 4140
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4141 TTCCCATGTAGTCCTTAGTGTGTCTGCTCCTCCTCTCTCTCCTCATCACAGTTCCCAGCCCCCACCTTCAACTG 4214
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4215 AACTCAACAAAATCTTCAACTTCATACAGTAGTCACATTGTTAGTAATAACACTGGCATTTTTATTTTGATAAA 4288
Query 220 --------------------- 219
Sbjct 4289 ATAGACCGTTTAAATTTTTGA 4309
