Nucleotide Global Alignment
Description
- Query:
- TRCN0000478282
- Subject:
- XR_925324.3
- Aligned Length:
- 5847
- Identities:
- 188
- Gaps:
- 5631
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 CGGCGGCGGGAAGATGGCGGCCTCCAGGAATGGGTTTGAAGCCGTGGAGGCAGAGGGCAGCGCAGGGTGCCGGG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GAAGCTCGGGAATGGAGGTGGTGCTTCCTTTGGATCCTGCCGTCCCCGCCCCGCTGTGCCCTCACGGACCCACT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CTTCTGTTTGTAAAGGTGACCCAAGGGAAAGAAGAAACTCGGAGGTTTTATGCCTGTTCAGCCTGTAGAGATAG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 AAAAGACTGTAATTTTTTTCAGTGGGAAGATGAAAAGTTGTCAGGAGCTAGACTTGCTGCCCGAGAAGCTCATA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 ACCGAAGATGTCAGCCTCCCCTGTCCCGAACGCAGTGTGTGGAAAGGTACTTGAAGTTTATTGAGTTGCCCTTG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 ACTCAGAGAAAGTTTTGTCAAACATGTCAGCAGTTGTTGTTACCAGATGACTGGGGGCAACATAGTGAGCATCA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 GGTTCTGGGTAATGTGTCCATTACCCAGTTAAGAAGGCCCAGTCAACTCCTTTATCCACTGGAAAACAAGAAGA 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CAAATGCCCAGTATCTGTTTGCTGATCGGAGCTGTCAGTTCTTGGTAGACTTACTTTCTGCCCTCGGATTCAGA 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 AGAGTACTGTGTGTTGGAACACCAAGGTTGCATGAGCTGATCAAGTTGACAGCATCAGGTGACAAGAAGTCTAA 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 CATTAAAAGCCTTTTATTGGATATTGATTTTCGGTATTCACAGTTTTATATGGAAGATAGCTTTTGCCATTATA 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 ATATGTTTAACCATCATTTCTTTGATGGAAAGACTGCCCTTGAAGTATGCAGAGCATTTTTACAGGAAGATAAA 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 GGCGAAGGAATCATTATGGTGACGGATCCTCCGTTTGGTGGCTTGGTTGAACCTCTGGCTATTACATTCAAGAA 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 GTTAATTGCTATGTGGAAAGAAGGTCAAAGCCAAGATGACAGTCACAAAGAACTACCCATTTTCTGGATTTTCC 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 CCTATTTTTTTGAATCCCGAATTTGTCAGTTTTTTCCAAGCTTCCAGATGCTGGATTACCAGGCTATTCCCTTC 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 TTTTTGGACTACAGGTTGTTTTTACCTTTTAAGGTAGATTATGATAATCATGCACTTTATAAACACGGAAAGAC 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 AGGTCGAAAACAGTCTCCCGTGCGTATTTTCACCAACATTCCGCCCAACAAAATAATCCTTCCTACTGAAGAAG 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 GGTACAGATTTTGCTCTCCGTGTCAACGGTATGTTTCTCTAGAGAATCAACACTGTGAGCTCTGTAATTCTTGC 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 ACATCCAAGGATGGCAGGAAATGGAACCATTGCTTTCTCTGTAAAAAGTGTGTAAAGCCTTCCTGGATCCACTG 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 TAGCATCTGCAATCACTGTGCTGTTCCAGATCATTCTTGTGAGGGCCCCAAACATGGCTGCTTTATTTGTGGTG 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 AACTGGATCATAAACGCAGTACTTGTCCTAACATTGCTACATCTAAGAGAGCTAACAAGTCAGTCGAATACTTT 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 ACTAGAAAAATGTATTCCATCTGTGTTTTATACAGGATAATCCACAAAAGCATGCAACATTCAGAGGATCTTGA 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 AGTGCCAAGTTAATTGTCACTTTCACTATTAAGTACTGGCTGCATAGATGGATGGAGGGAGGAGAGGAAGATGA 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 TTCAAAGAGCTTGCTTTCAAAGAGCTTACAGTTCTACAGCTTAGAGATGAAAATAACCAAAATATGAGAGCTGT 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 CAGAAAGCAGAAGCAAAGAAAAAGTAATAAGATGAAAATGGAGACCACGAAAGGACAATCCATGAATCATACAT 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 CTGCTACAAGGAGAAAGAAAAGGAGGGAAAGAGCCCATCAATATCTTGGCTCTTAAATGTCCAGTGACTGGAGA 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 ATAAGAAAGATTTATGGTCCAACCTTTGATGCCATTTTCTGAAAGTGCCACACTGGACTTAAATTCAGCTGCTT 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 CCAGAGGTGTGCACCTTTCTGAGCTAGATAACAGGCAGGTGGCATTTGCTGGTTTACAGTCCCTTATCTGCCTC 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 TCTGGAGACATGGGGAGTTGTTCCATCTTCAGCCAGTTTACTAGTTCTTTCAGCATTCATTTTTCCTCACTTTA 2072
Query 1 --------------------------------------------------ATGGAGTCTCATTCTGTCGCCCAG 24
|||||||||...||||||.|||||
Sbjct 2073 AGTCTCTCCCAGTCACATTGTTCTATTTTTATGTTTTCATTTTTTTTGAGATGGAGTCTTGCTCTGTCTCCCAG 2146
Query 25 ACTGGAGTGAAGTGGCATGATCTCGGCTCACTGCAACCTCTGCCTCTCGAGGTCAAGCGATTCTCCTGCCTCGG 98
.||.|||||.|.|||||..|.|||.|||||||||||||||||||||.||.|.||||||.||||||||||||..|
Sbjct 2147 GCTAGAGTGCAATGGCACAACCTCAGCTCACTGCAACCTCTGCCTCCCGGGTTCAAGCAATTCTCCTGCCTTAG 2220
Query 99 CCTCCGGAGTAGCTGGGATTACAGGCACACGCAACCATGCCCGGCTAATTTTTTTTGTATTTTTAGTAGAGATG 172
|||||.||||||||||.||||.|||||||.||.||||.|.|.|||||| |||||||||||||||||||||.|
Sbjct 2221 CCTCCTGAGTAGCTGGAATTATAGGCACATGCCACCACGACTGGCTAA---TTTTTGTATTTTTAGTAGAGACG 2291
Query 173 GGGTTTCACCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAAG--------------------------- 219
|||||||||||||||||||||||||||||||||||||||.|||||||
Sbjct 2292 GGGTTTCACCATGTTGGCCAGGCTGGTCTCGAACTCCTGGCCTCAAGTGATTTGCCTGCCTTGGCCTCCCAAAG 2365
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2366 TGCTGGGATTACAGGCATGAGCCACCTCACCCAGCTCCGGTCACATTATTCTAGCCTTTTTATCCAAAAAATGG 2439
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2440 GCAGACCATTCTTTTGCAGAAGATGTCAGAAGAAAATGAAAGTGAAAACCTATGCAGTTTGTTTACCGTGAACA 2513
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2514 TAAAAGTATGTTAATTTAAATAGGAAAATATTTTATGTTAAATATGAAACAATAGTTTAAACCCCACTTGAAAA 2587
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2588 GTATAGCGTACAATTATTTTTAGACTGAATTTGAAGATGATGGAAAGGGTTTTTACAAAGGCACTGTTTAGATA 2661
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2662 TACAGATTATAATTATAATTACATTATTATTAAATATTTATTCTTCAAGTACTTTTTGCAGTTGTCCTCTGACG 2735
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2736 GTCTAGAATCACTTAAATGCTTGTTGAATGAGTGAGATGTTTAGAACTACGACTTGCTCTGTCATTCCAGTGTC 2809
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2810 GTTTAACCTATGCAGTAAGATTCTGTCTTTGTAAAAGTAGTTCGTAGCAGAAGCCAGGATAGTTTGGTAATTAA 2883
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2884 ACGCCCAAACTAAACTCCTCATTCCTACCCTTAATATTTCCTGGCTGTATGATCTTGGCCAGGTCACTCTCTAA 2957
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2958 AAGCCCCGGTTTCTTCATTATTATCATTATTATAATGGGGAGAATAACAGCTATACCTGAGGTTTGTTTTGTGA 3031
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3032 TTAAATTAAATGAGACCCAAGTGCTTGGCTCTCAGTTCTCCTCTGTCATTGGTGTGTTAGGTTAACAATGAAGA 3105
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3106 TTGTTACTGGGTCTAATGGTAATTACCTTTTGGCCTGATAACAAAGCATTGAAGGCAGTAATTTGAACTCCCAG 3179
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3180 AACAAACAGTTCATCTCCCCGTTTCTGTGCTAGTTATTGTCTCCTTAAGACTGAATTGTTTTGAATGACTTATA 3253
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3254 TTTGCATAATGACTTTTCTCTTGTTTCCAAACAACTGCTGTAGAGCAGATTTGAAGGCATCTTTGTTTGGGGTT 3327
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3328 AGGCAGAGCCCTGTAAGTAAGGGTGGAGGAACTGCACTCTATCTGGTATTTAAATTCCAGGTAAGTTAGGACTG 3401
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3402 ATGCCTGGTGTAGAATGCTCAAGTGTGGCCCAGATCAGTGTGGCAGTGGTGTACATCAGTTGATGTCAAAAGAT 3475
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3476 GAGTTATACCCCTGGACTTCATAAGCATCAGAAAGCTCTTCTCCCTTTTGTTACATGGAGGGCTATGATAGGAG 3549
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3550 GGGCACATTTGGAGGTGACTGGGTGAGATATGAAGTTTGTAAAACCGTTGTGAGAGTTCCCCTCTCTGATTCAA 3623
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3624 GCAAGGATAGGGACATTGCCTGACTTTATGGTGTTCACCATTCCATGATAAAATCTATTGAAATCTCCTCTGAA 3697
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3698 ACTAAGACACCTGAGGGACTATGACTACTGAAAAATTGAGTTCTGAAGGCCAACAGTTATTCTCATCACTATAT 3771
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3772 TGCCTTAATGTTAAGATACCATCAATTATAAAATACATCATTGATTTTATCATAGCTTTTCAGGGGGAGAAGAG 3845
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3846 AAATAATACTTCATTAATTAATTTTTAGATCATCTGATTTCAGAAATACTGAAATGCAAAAAAAAAAAAAATCT 3919
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3920 TAGAATTGAGGAAATAGTTATAATCAGGAATAATGTACTTATTTATTTTGAGACAGAGTCTTGCTTTGTTGGAC 3993
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3994 AGGCTGGAATGCAGTGGTGGGATCTCTGCTCACCGCAACCTCTGCCTCCTGGGTTCAAGTGATTCTTGTGCCTC 4067
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4068 AGCCTCCCTGGTAGCTGGGATTATGGGTGTGTGCCACCACACCCGGCTAATTTTTATATTTTTGTAGAGACTGG 4141
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4142 GTTTCGCCATGTTGGCCAGGCGAGTCTCAAACTCCTCATCTCAGGTGATCTGCCCGCCTCAGCTTCCCAAAGTG 4215
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4216 CTGGGATTACAGACGTGAGCCACCACACCCAGCCAGGAATAATGTACTTTAAAACTTTATTACTGTCTTAGAAA 4289
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4290 GTTAAAAATAGGAAATTTGGTGATTTTACACTTATATTCAATTAATACTAATTTTAAGGACTTAATCTCTATTC 4363
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4364 CTTTTTCAGAGAATAAACTAATTGGTAGCCTGTAAAAATGTGTCTCTGGGAGGTAGAATGTGAAGCGGGATGAG 4437
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4438 GTCATTTGTTCTTAATAGAAATCTGAACATCTTAACATTAAGATACCTTCTCAAAATAGCAATAGAAGAAAATC 4511
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4512 CCTAAAATTTGACAGATAACATTTTCTAAGCTTTTTAAAAGGACATTTTTAATAAATACAGCTAAATTTCATTC 4585
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4586 TTCTTATATTATGAAATTTAATGAGAAACAAAGTCTTTTTGTAGGCTGGATTTCATGTTTTTTCCTAATTAGTC 4659
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4660 CAGTACCTAGACTAGTTTATCACTCCATATGCCCCATTCTTTTCATCCGATACTGTTCTTTCTGCTTGGAATAT 4733
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4734 GTCCCTCCATGTGGCCACTCCGTTCTCTTTTGGGAATCTTCCACGAGTCCCTGATACTGAAACCTTCTTTGGCC 4807
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4808 CCTTGGTGTTTGATACCACATTTAAGGCCTTTCACATATTATTCTGTGATTATTTTTACTGATTTTATTTCCCT 4881
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4882 CAAAGATTTAGGTCTCTTAATGTCAGCACCCATTTCATCTGCTCTTGTGTATCTTGTGCCTTTTTGGTGCTCAA 4955
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4956 TAAAAATTTGATGTAAGCATGGAATTTTCTAGAGGCTTTGAAGTGGTAGGCATGCCTGAAATACGGACTGGACC 5029
Query 220 -------------------------------------------------------------------------- 219
Sbjct 5030 CACTCTATTATGTTTCTTCTAGGGACTGAAAAGGGAAACAGATTTGTATTAGGAGGCACTTAGAGTCAATATGA 5103
Query 220 -------------------------------------------------------------------------- 219
Sbjct 5104 GGACCACCCTAACTGAAGTTTTAAATGTGGGGATGTGCTGCGTGAAGATTAGTAGCCTTGTAGCAGGATGAGCC 5177
Query 220 -------------------------------------------------------------------------- 219
Sbjct 5178 GTGGACAAAACCCCACAGACACCAAGATAGTGAAGGAAGTAGCTTTTAATCAGTTGGAAGCATCGACAGTCTAG 5251
Query 220 -------------------------------------------------------------------------- 219
Sbjct 5252 TGTCTTAAAATCCGAGTTTGTTGAGTGCACAATTTCTGTCCCTTTTAAGGGCTCACAACACTAAAGATTTTACA 5325
Query 220 -------------------------------------------------------------------------- 219
Sbjct 5326 TGACAGGGCCGTGATCGATTGAGCAATCTAGGGGGTATGTGACAGGGGCTGCATGCACCGGTAATCAGAGTGAA 5399
Query 220 -------------------------------------------------------------------------- 219
Sbjct 5400 ACAACAGAACGAGAAGTTTCACAATGTCCTTCCATACAATGTCTGGAATCTACGGATAACATCGGTTGCTAGGT 5473
Query 220 -------------------------------------------------------------------------- 219
Sbjct 5474 CATGGGTTGAATTTTAACTATCAGGCTAAGGTCAGGCAGGCCCAGGCCTGGTTTTGGGTCTGGTGCCTGGCACC 5547
Query 220 -------------------------------------------------------------------------- 219
Sbjct 5548 CGGCTGCCTGCCTTTGGTTTTGCTTCCTTGTTTCTTAAAACAGGTACTGAGCATAAAACAATATAGAACAATAC 5621
Query 220 -------------------------------------------------------------------------- 219
Sbjct 5622 GGGGGGGGATCTCTTTCTCTCTTCTCTCAGCTTTATCTGCAAGACCCCTTCAAAGTAATCTGCAAAATACTAGG 5695
Query 220 -------------------------------------------------------------------------- 219
Sbjct 5696 CATCTGGGAGAAGTTTGACTAATCTTGAAATATAAAATCACAACCTACAAAGGGTCCTGGTCAGCTGCCACTGC 5769
Query 220 -------------------------------------------------------------------------- 219
Sbjct 5770 CTTCACAATGTCCCTGTTGGTCTCTCCACTGGAGTAGTACATCTGTTGCCAGAGAAATAAAAATGTCAGTTTGT 5843
Query 220 - 219
Sbjct 5844 G 5844
