Nucleotide Global Alignment

Description

Query:
TRCN0000478282
Subject:
XR_935264.2
Aligned Length:
3040
Identities:
188
Gaps:
2823

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  AGTTGAGTCTGCGGAGCCGCGGGCAGTGGCAGTCAGGCCTCCCCGCTCTGTGCTACCTGCGGCCCGGCTCTCCT  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  CCGCGCCCCCACTCGCGCTGCGATGACGCGCTCACTGTTCAAGGGAAACTTTTGGAGTGCAGACATCCTCAGCA  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  CCATCGGCTATGACAACATTATCCAACATCTGAACAATGGCCGCAAGAACTGCAAAGAGTTTGAAGACTTTCTA  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  AAAGAAAGGGCAGCAATTGAAGAGAGGTATGGCAAAGATCTGCTCAACCTCTCTAGGAAGAAGCCGTGTGGACA  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  GTCTGAAATCAACACCCTGAAGCGGGCCCTTGAAGTCTTCAAGCAGCAAGTAGACAATGTGGCACAATGTCACA  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  TTCAGCTTGCACAGAGTTTAAGAGAAGAGGCCAGGAAGATGGAAGAATTCAGGGAAAAGCAAAAACTACAACGA  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  AAAAAGACAGAGCTCATAATGGATGCTATCCATAAACAAAAGAGCTTACAATTCAAGAAAACCATGGATGCAAA  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  GAAGAACTATGAGCAGAAATGCCGGGACAAAGATGAGGCAGAACAGGCCGTCAGCCGGAGTGCCAACCTGGTGA  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  ACCCGAAGCAACAAGAAAAGCTTTTTGTGAAACTGGCAACTTCAAAGACCGCAGTAGAGGACTCAGACAAAGCA  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  TACATGCTGCACATCGGCACCCTGGATAAGGTCCGAGAAGAGTGGCAGAGTGAGCACATCAAGGCCTGCGAGCT  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  ATTTTTCTGTAGGCATTTGAGGCTCAAGAATGTGAACGAATAAACTTCTTCCGGAATGCATTGTGGTTACATGT  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  GAATCAGCTGTCACAACAATGTGTCACCAGTGATGAAATGTACGAACAAGTCCGAAAGAGTTTAGAAATGTGCA  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  GCATTCAGAGGGACATTGAATACTTTGTGAATCAACGCAAAACTGGACAGATTCCACCAGCACCCATCATGTAT  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  GAGAATTTCTACTCCTCCCAGAAGAATGCAGTCCCAGCAGGAAAGGCTACAGGGCCTAACTTGGCAAGGAGAGG  1036

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1037  ACCCCTCCCAATTCCTAAAAGCTCACCAGATGATCCCAATTACTCTTTGGTTGATGACTACAGTTTGCTCTATC  1110

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1111  AGTAAAATCAATGAAACCAGAGCTTTTTCCGGCTAGTGCTTCTGTGATATGGAAAGGGCACCCAGAGCAGCAGG  1184

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1185  ACCTATAGCCACGTTATGTCAGCAATGAAGACTTTGAAGTGAACCCTTGCTATAATTTTTTAGAGATTTAAAAT  1258

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1259  TTATGGTAGACATTTAGGACAACATAAGCAAGTAGAGTTCTGCAGTTTTTTGAAGTTTACAAATTGCCCCATTC  1332

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1333  TGAAGAATTATTCTTTCCCAGTTACTCAGGTTATGAATGAATTAGGTTTTCAACATGGGAAGCATGAAATCCAC  1406

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1407  TTCTGGATTTGGAGCATCCACTTGAGGAGCAGAGGTGGCAGCAGAGGATTCTGAGCCACCAACTGCAGTAGTGG  1480

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1481  CTCCTTTGGCTTTGGGCAGCCTGGCTGTGGAGTTTCCACGGCGACACACAGCCTCAGTGGTGCAAGATTTAAAA  1554

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1555  TTACCTTCCTTTTTGGCTGGAAGACTTAGAAGCCGCCTGATCATACTTTCTCATTTTACAGATGAGGAAATAAA  1628

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1629  GCCTACAAGTGTGAAATTAATTTCCTTACAGTTTTCCTAGCTGATGAGGGACAGAACCAGAACTAGAGCCTGAG  1702

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1703  CCCAACCCACATCACTATTCTTCTAACCCTTCCTGAAGTTGTGATGCTCATGCTGAAATTTAAGATGCCAAATA  1776

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1777  TTTTTGCCAGCACTTTTTCAGTTGGGAGAATCACCAGGGTTTAAATGTCAGATTTATTTTTATGTGGATCCCTG  1850

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1851  TGTATGCTGAACTACAGAGCATGATGTTTAATCTAATTTAAGGAGCCACTGATTGTAAAACATGCCATTATTTT  1924

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1925  ATGTTGCACTAAGAAGGTGGGGTCGAGGAGTTGCCAATAAACTTGGGACAGACTATTGATGGCCAAGCCCATCT  1998

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1999  GAATTTAAGATGCTAAAGTATGAAAAAAATACATCTTAGAATCAATGAAATACCATATTTTGATTCCATTCCTC  2072

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2073  AAGATAATTTTAGAGTTATAAAACCAGTCCTCAATTTTGGGTCTTCACAGAGAATCTTTCCCTTGCTAGACCCC  2146

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2147  AGAATTTTAAATGCATCCGTCTTACACTTTCACAAATATTTGGGTTTTCCTTTTTCACTCACAAACAGCAGGGA  2220

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2221  GGTCATGTACTTTTTGTACAACACCTGTGCACTATGAGAAAATGGTACCTTTTAGTTATTGACAAGTTAAAATA  2294

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2295  GCACTCTCAGTTTTTCAGTATTACAGAGAGCAAATAGTTTCCTCTCCTGCTCTGTGCAGTAGCTTTTCCAGAAC  2368

Query    1  -------------------------------------------------------------ATGGAGTCTCATT  13
                                                                         |..|||||||..|
Sbjct 2369  TATGGACAAATTGATCAGAAGAAGATTGATTATTTCCTCATCTTTTTTTCTTTTTTTTGAGACAGAGTCTCTCT  2442

Query   14  CTGTCGCCCAGACTGGAGTGAAGTGGCATGATCTCGGCTCACTGCAACCTCTGCCTCTCGAGGTCAAGCGATTC  87
            |||||.|||||.|||.||||.||.|||||||||||.|||||||||||||||||||||.||.|.|||||.|||||
Sbjct 2443  CTGTCCCCCAGGCTGAAGTGCAGCGGCATGATCTCAGCTCACTGCAACCTCTGCCTCCCGGGTTCAAGTGATTC  2516

Query   88  TCCTGCCTCGGCCTCCGGAGTAGCTGGGATTACAGGCACACGCAACCATGCCCGGCTAATTTTTTTTGTATTTT  161
            |||||||||.||||||.||||||||||||||||||||||.|.|.||||..||.||||||  |||||||||||||
Sbjct 2517  TCCTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGCACCCACCACCACACCTGGCTAA--TTTTTTGTATTTT  2588

Query  162  TAGTAGAGATGGGGTTTCACCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAAG----------------  219
            |||||.|||..||||||.||||||||||.||||||||||||.||||||||||||||.|                
Sbjct 2589  TAGTAAAGACAGGGTTTTACCATGTTGGTCAGGCTGGTCTCAAACTCCTGACCTCAGGTGATCCACCTGCCTCG  2662

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2663  GCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACTGCGCCCGGCCTATTTCCCCACCTTTCGTGTAAGGTGC  2736

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2737  TACTGAACATGACAGCTTCTTGTCATGACAGGAAACTTGCATCAGTTGGATATCCTTTTGAGAAACTGAATTTT  2810

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2811  GCAAAGGGCCAAATTTCCCCAAACTGAACGGGCTCAGGAAATGTTCCTTTACACTCAGAACATTCTATTTTAAG  2884

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2885  TATATTATTTATTGTTGGCAGTTCCTCAGGGATTTCCCTTTTCTCTGTATTGGTCAGTGTAGTTGATGTAAAAC  2958

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2959  CGTTTTGTGGATGGAAAATATTTTTATTTTATTGCTCTTTTAGTTTGGTAGGTTAAATAAAGGTTCTTGGTAAT  3032

Query  220  ------  219
                  
Sbjct 3033  TTGGGA  3038

GPP Web Portal Terms of Service

Effective Date: December 8, 2025
By using this site, you agree to our terms and conditions below.

Overview of Terms

The data made available on this website were generated for research purposes and are not intended for clinical or commercial uses. Commercial use (or other use for profit-making purposes) of the GPP Web Portal and its tools, is not permitted under these terms and may require a separate license agreement from Broad or its contributors. For more information, please contact partnering@broadinstitute.org.

The original data may be subject to rights claimed by third parties, including but not limited to, patent, copyright, other intellectual property rights, biodiversity-related access and benefit-sharing rights. It is the responsibility of users of Broad Institute services to ensure that their use of the data does not infringe any of the rights of such third parties.

Any questions or comments concerning these Terms of Use can be addressed to: legal@broadinstitute.org.

By accessing and viewing this GPP Web Portal, you agree to the following terms and conditions:

Attribution

You agree to acknowledge the Broad Institute (e.g., in publications, services or products) for any of your use of its online services, databases or software in accordance with good scientific practice. You agree to use the acknowledgment wording provided for the relevant tools as indicated on the FAQ for each tool.

Updating the Terms of Use

We reserve the right to update these Terms of Use at any time. When alterations are inevitable, we will attempt to give reasonable notice of any changes by placing a notice on our website, but you may wish to check each time you use the website. The date of the most recent revision will appear on this, the "GPP Web Portal Terms of Use" page. If you do not agree to these changes, please do not continue to use our online services. We will also make available an archived copy of the previous Terms of Use for comparison.

Indemnification and Disclaimer of Warranties

You are using this GPP Web Portal at your own risk, and you hereby agree to hold Broad and its contributors and their trustees, directors, officers, employees, and affiliated investigators harmless for any third party claims which may arise from your use of the GPP Web Portal, the tools available therein, or any portion thereof. Further, you agree to indemnify Broad, its contributors, and its and their trustees, directors, officers, employees, affiliated investigators, students, and affiliates for any loss, costs, claims, damages, or other liabilities arising from any unpermitted commercial or profit-making use you make of the GPP Web Portal. The GPP Web Portal is a research tool and is provided "as is". Broad does not represent that the GPP Web Portal is free of errors or bugs or suitable for any particular tasks.

ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE IMPLIED WARRANTIES OF MERCHANTABILITY, FITNESS FOR A PARTICULAR PURPOSE, NONINFRINGEMENT, OR THE ABSENCE OF LATENT OR OTHER DEFECTS ARE DISCLAIMED. IN NO EVENT SHALL BROAD OR ITS CONTRIBUTORS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THE GPP WEB PORTAL, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.

Governing Law

The terms and conditions herein shall be construed, governed, interpreted, and applied in accordance with the internal laws of the Commonwealth of Massachusetts, U.S.A. Furthermore, by accessing, downloading, or using the Database, You consent to the personal jurisdiction of, and venue in, the state and federal courts within Massachusetts with respect to Your download or use of the Database.