Nucleotide Global Alignment

Description

Query:
TRCN0000478353
Subject:
XM_006526807.3
Aligned Length:
3534
Identities:
626
Gaps:
2835

Alignment

Query    1  ATGAGTTCTGAATGTGATGGTGGTTCCAAAGCTGTGATGAATGGCTTGGCACCTGGCAGCAATGGGCAAGACAA  74
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query   75  AGACATGGATCCTACAAAAATCTGCACTGGGAAGGGAGCGGTGACTCTCCGGGCCTCGTCTTCCTACAGGGAAA  148
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  149  CCCCAAGCAGTAGCCCTGCGAGCCCTCAGGAAACCCGGCAACACGAAAGCAAACCAGATGAGTGGAGGCTTTCT  222
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  223  TCCAGTGCTGATGCCAATGGAAATGCCCAGCCCTCTTCACTCGCTGCCAAGGGCTACAGAAGTGTGCATCCCAA  296
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  297  CCTTCCTTCTGACAAGTCCCAGGATGCCACTTCCTCCAGTGCAGCCCAGCCGGAGGTAATAGTTGTCCCTCTCT  370
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  371  ACCTGGTTAATACTGACAGAGGGCAAGAAGGCACTGCCAGACCTCCAACACCTCTGGGGCCTCTTGGCTGCGTC  444
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  445  CCCACAATCCCAGCGACTGCCTCTGCCGCCTCACCTCTGACCTTCCCGACTCTAGATGATTTCATTCCCCCTCA  518
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  519  TCTGCAGAGGTGGCCCCACCACAGCCAGCCAGCCCGCGCCTCTGGCTCCTTTGCCCCCATTAGCCAGACGCCAC  592
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  593  CATCCTTCTCACCACCACCTCCGCTGGTCCCTCCTGCCCCGGAGGACCTCCGCAGAGTCTCGGAGCCTGACCTC  666
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  667  ACGGGAGCTGTTTCGAGTACCGATTCCAGTCCTCTACTAAATGAAGTTTCTTCTTCCCTTATTGGAACTGATTC  740
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  741  CCAAGCCTTTCCATCAGTTAGCAAGCCTTCATCCGCCTATCCCTCCACAACGATTGTCAATCCTACTATTGTGC  814
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  815  TCTTGCAACACAATCGAGAACAGCAAAAACGACTCAGTAGCCTTTCAGATCCTGTCTCAGAAAGAAGAGTGGGA  888
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  889  GAGCAGGACTCAGCACCAACCCAGGAAAAACCCACCTCACCTGGCAAGGCTATTGAAAAAAGAGCAAAGGATGA  962
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  963  CAGTAGGCGGGTGGTGAAGAGCACTCAGGACTTAAGCGATGTTTCCATGGATGAAGTGGGCATCCCACTCCGGA  1036
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query 1037  ACACTGAGAGATCAAAAGACTGGTACAAGACTATGTTTAAACAGATCCACAAACTGAACAGAGATGATGATTCA  1110
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query 1111  GATCTGTACTCTCCCAGATACTCATTTTCTGAAGACACAAAATCTCCCCTTTCTGTGCCTCGCTCAAAAAGTGA  1184
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query 1185  GATGAGCTACATTGATGGTGAGAAGGTAGTCAAGAGGTCGGCCACACTACCCCTCCCAGCCCGCTCTTCCTCAC  1258
             ||||.||||||.||.||.|||||.||.||.||||||||.||||||||.||.||||||||||||||.|||||||
Sbjct    1  -ATGAACTACATCGAAGGGGAGAAAGTGGTTAAGAGGTCCGCCACACTCCCGCTCCCAGCCCGCTCCTCCTCAC  73

Query 1259  TGAAGTCAAGCTCAGAAAGAAATGACTGGGAACCCCCAGATAAGAAAGTAGACACAAGAAAATATCGTGCAGAG  1332
            |.|||||.|||.|.||||||||.||||||||.|||||||||||||||||.||.||.||||||||.||.||||||
Sbjct   74  TCAAGTCCAGCCCGGAAAGAAACGACTGGGAGCCCCCAGATAAGAAAGTGGATACGAGAAAATACCGAGCAGAG  147

Query 1333  CCCAAGAGCATTTACGAATATCAGCCTGGCAAGTCTTCCGTTCTGACCAACGAAAAGATGAGCTCAGCCATCAG  1406
            |||||.||||||||||||||||||||.|||||||||||.||.||||||||.||.||||||||||||||..||||
Sbjct  148  CCCAAAAGCATTTACGAATATCAGCCGGGCAAGTCTTCGGTCCTGACCAATGAGAAGATGAGCTCAGCAGTCAG  221

Query 1407  CCCTACTCCGGAAATTTCTTCAGAGACTCCTGGATATATATATTCTTCCAACTTCCATGCAGTGAAGAGGGAAT  1480
            |||.|||||.||.|||.|.||||||.|||||||||||||.|||||||||||||||||||||||||||||.||||
Sbjct  222  CCCGACTCCAGACATTACGTCAGAGCCTCCTGGATATATCTATTCTTCCAACTTCCATGCAGTGAAGAGAGAAT  295

Query 1481  CAGACGGGGCTCCTGGGGATCTCACTAGCTTGGAGAATGAGAGACAAATTTATAAAAGTGTCTTGGAAGGTGGT  1554
            |.||||||.|.||.||||.||||.|||||||||||||||||||.||.||.|||||.|||||||||||||||||.
Sbjct  296  CGGACGGGACCCCCGGGGGTCTCGCTAGCTTGGAGAATGAGAGGCAGATCTATAAGAGTGTCTTGGAAGGTGGC  369

Query 1555  GACATCCCTCTTCAGGGCCTGAGTGGGCTCAAGCGACCATCCAGCTCTGCTTCCACTAAAGATTCAGAATCGCC  1628
            ||||||||||||||||||||.|||||||||||||||||.||||||||.||||||||||||||||||||.||.||
Sbjct  370  GACATCCCTCTTCAGGGCCTCAGTGGGCTCAAGCGACCTTCCAGCTCAGCTTCCACTAAAGATTCAGAGTCACC  443

Query 1629  AAGACATTTTATACCAGCTGATTACTTGGAATCCACGGAAGAATTTATTCGAAGACGTCATGATGATAAAGAGA  1702
            ||||||||||||||||||||||||||||||.|||||.||||||||||||||.|||||.||.|||||||||||||
Sbjct  444  AAGACATTTTATACCAGCTGATTACTTGGAGTCCACAGAAGAATTTATTCGGAGACGGCACGATGATAAAGAGA  517

Query 1703  AACTTTTAGCGGACCAGAGACGACTTAAACGCGAGCAAGAAGAGGCTGATATTGCAGCTCGACGCCACACAGGC  1776
            ||||||||||||||||||||||||||||.|||||||||||||||||.||||||||||||||.|||||||||||.
Sbjct  518  AACTTTTAGCGGACCAGAGACGACTTAAGCGCGAGCAAGAAGAGGCCGATATTGCAGCTCGCCGCCACACAGGT  591

Query 1777  GTCATTCCGACGCACCATCAGTTTATCACTAATGAGCGCTTTGGGGACCTCCTCAATATAGACGATACTGCAAA  1850
            |||||.|||||.||.|||||||||||||||||||||||||||||||||||||||||||||||.|||||.||.||
Sbjct  592  GTCATCCCGACTCATCATCAGTTTATCACTAATGAGCGCTTTGGGGACCTCCTCAATATAGATGATACGGCCAA  665

Query 1851  AAGGAAATCTGGGTCAGAG------------------AAATATGACT-----GGGCA-----------------  1884
            ||||||||||||||.||||                  ||||.|||||     |..||                 
Sbjct  666  AAGGAAATCTGGGTTAGAGATGAGACCTGCTCGAGCCAAATTTGACTTTAAAGCCCAGACCCTGAAGGAGCTGC  739

Query 1885  --------------------------------------------------------------------------  1884
                                                                                      
Sbjct  740  CTCTGCAGAAGGGAGACGTTGTTTACATCTACAGACAGATTGACCAGAACTGGTATGAAGGTGAACACCATGGC  813

Query 1885  --------------------------------------------------------------------------  1884
                                                                                      
Sbjct  814  CGGGTGGGAATCTTCCCACGCACCTATATCGAGCTTCTTCCTCCAGCTGAGAAGGCTCAGCCCAGAAAGTTGGC  887

Query 1885  --------------------------------------------------------------------------  1884
                                                                                      
Sbjct  888  ACCCGTACAAGTTTTGGAATATGGAGAAGCCATTGCGAAGTTTAACTTTAATGGAGATACACAAGTAGAAATGT  961

Query 1885  --------------------------------------------------------------------------  1884
                                                                                      
Sbjct  962  CTTTCCGAAAGGGGGAGAGGATCACGCTGCTCCGACAGGTGGATGAGAACTGGTACGAAGGGAGGATTCCTGGG  1035

Query 1885  --------------------------------------------------------------------------  1884
                                                                                      
Sbjct 1036  ACATCTCGCCAAGGCATTTTCCCTATCACCTATGTAGATGTGCTTAAGAGGCCATTGGTGAAAACCCCTGTGGA  1109

Query 1885  --------------------------------------------------------------------------  1884
                                                                                      
Sbjct 1110  TTACATCGACCTGCCTTATTCTTCTTCCCCAAGTCGCAGTGCCACTGTGAGCCCACAGTATACTAGTCACAGCA  1183

Query 1885  --------------------------------------------------------------------------  1884
                                                                                      
Sbjct 1184  AGCTCATCATGCCAGCCCCTTCATCTCTACCCCACCCCCGCCGAGCCCTGTCCCCTGAGATGCACGCCATCACC  1257

Query 1885  --------------------------------------------------------------------------  1884
                                                                                      
Sbjct 1258  TCCGAGTGGATCTCTCTGACTGTCGGGGTCCCAGGCAGGCGTTCTCTGGCCATGACACCACCCTTGCCTCCTCT  1331

Query 1885  --------------------------------------------------------------------------  1884
                                                                                      
Sbjct 1332  GCCTGAGGCTTCTGTCTATGACATGGACCGCCTGGCCTTGTCAGCAAGGGCCCGTCCCTCCTTGCCTCTCAGCC  1405

Query 1885  --------------------------------------------------------------------------  1884
                                                                                      
Sbjct 1406  TCCCCTATTCAAGTTGGTCAGATCACTCCACCCTGCGCCCAGTGGTCTCCCCGATGGCCCTGCCTCCACCCCAC  1479

Query 1885  --------------------------------------------------------------------------  1884
                                                                                      
Sbjct 1480  AAAGCCTACTCACTGGCACCCAGTGTCCAGGCTCCTCTTCACGTCAATGGAGATGGTGGTATTCACATTCGCCA  1553

Query 1885  --------------------------------------------------------------------------  1884
                                                                                      
Sbjct 1554  AGATGGCTTCTCCCAGCCACCACCTGGGAACTCTGATAGGGTCATCTCAGAGCTTAGTGACGCCTTTAGCAGCC  1627

Query 1885  --------------------------------------------------------------------------  1884
                                                                                      
Sbjct 1628  AGAGCAAGAGACAGCCCTGGCGAGAAGATGGACCATATGACAGGAAAGCAGAGAGCGAGGCAGGTGAGAGATAC  1701

Query 1885  --------------------------------------------------------------------------  1884
                                                                                      
Sbjct 1702  CCTGGTGGACCCAAGATCTCTAAGAAGAGCTGCTTGAAACCTTCAGACGTGGTCAGGTGCCTGAGTTCTGAGCA  1775

Query 1885  --------------------------------------------------------------------------  1884
                                                                                      
Sbjct 1776  GAGACTCTCAGAGTTCCACACTCCTGAGGACAGTCAGTCCTGCAAGCCCCTGGGTGGCCCTTTCCCAGCCTGGG  1849

Query 1885  --------------------------------------------------------------------------  1884
                                                                                      
Sbjct 1850  AGACTGGGCCACCAGAGCTGCACAGAGCTGTCGAGGCTGACAGGAAGGCTGCTCAGAGTGGTGTGAGCCAGCCT  1923

Query 1885  --------------------------------------------------------------------------  1884
                                                                                      
Sbjct 1924  TCTCATCATTCATTGAGCGCAGGACCTGATCTCACAGAATCTGAAAAGAACTATGTGGAAGCGGTTTGCAATGA  1997

Query 1885  --------------------------------------------------------------------------  1884
                                                                                      
Sbjct 1998  GATCATAAACATTGCGGAGAAATCTGTTCATTACTGCAGCACTGTCTCTCATCCCCTTGACTTCCATCACAAGG  2071

Query 1885  --------------------------------------------------------------------------  1884
                                                                                      
Sbjct 2072  TACCCCCTTCTGACAATAAATCATCTTTAATCATTTCTCAGCAACCTCAAGCCCAGCAGCGAAGAGTCACCCCA  2145

Query 1885  --------------------------------------------------------------------------  1884
                                                                                      
Sbjct 2146  GACAGGAGTCAGCCCTCACTGGATTTGTGTAGCTACCAAGCGTTATATAGTTATGTGCCACAGAACGATGATGA  2219

Query 1885  --------------------------------------------------------------------------  1884
                                                                                      
Sbjct 2220  GTTGGAACTCCGAGATGGAGATATTGTTGATGTCATGGAAAAATGTGACGATGGATGGTTTGTTGGCACTTCGA  2293

Query 1885  --------------------------------------------------------  1884
                                                                    
Sbjct 2294  GAAGGACGAGGCAGTTTGGTACTTTTCCAGGCAACTATGTAAAACCTTTATATCTA  2349

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