Nucleotide Global Alignment
Description
- Query:
- TRCN0000478353
- Subject:
- XM_017318089.1
- Aligned Length:
- 5349
- Identities:
- 1293
- Gaps:
- 3870
Alignment
Query 1 ATGAGTTCTGAATGTGATGGTG---GTTCCAAAGCTGTGATGAATGGCTTGGCACCTGGCAGCAATGGGCAAGA 71
|||||||||||||||||||.|| |.||.|||||||||.||||||||||||||.||||||.|.||||.|.|||
Sbjct 1 ATGAGTTCTGAATGTGATGTTGGAAGCTCTAAAGCTGTGGTGAATGGCTTGGCATCTGGCAACCATGGACCAGA 74
Query 72 CAA----------------------------------------------------------------------- 74
|||
Sbjct 75 CAAAGCCGACCCTTTCCGTGCTCGCTCTATATCTGCTGTTAAAATAATTCCCGTGAAGACAGTGAAAAGCCCTT 148
Query 75 -------------------AGACATGGATCCTACAAAAATCTGCACTGGGAAGGGAGCGGTGACTCTCCGGGCC 129
|||||||||.|||||.|||||||||||||||||.|||.|.||||||||.||||||
Sbjct 149 CAGGCCTAGTACTCCCTCCAGACATGGACCCTACCAAAATCTGCACTGGGAAAGGAACAGTGACTCTTCGGGCC 222
Query 130 TCGTCTTCCTACAGGGAAACCCCAAGCAGTAGCCCTGCGAGCCCTCAGGAAACCCGGCAACACGAAAGCAAACC 203
||||||||||||||||.||||||||||||.|||||||.||||||.||||||.|.|.|.|.||.||||||||..|
Sbjct 223 TCGTCTTCCTACAGGGGAACCCCAAGCAGCAGCCCTGTGAGCCCCCAGGAATCTCCGAAGCATGAAAGCAAGTC 296
Query 204 AGATGAGTGGAGGCTTTCTTCCAGTGCTGATGCCAATGGAAATGCCCAGCCCTCTTCACTCGCTGCCAAGGGCT 277
||||||.||||..||||||||||||||.|||.|||||||.||.|||||||||||..||||.|||||||||||||
Sbjct 297 AGATGAATGGAAACTTTCTTCCAGTGCAGATACCAATGGCAACGCCCAGCCCTCCCCACTTGCTGCCAAGGGCT 370
Query 278 ACAGAAGTGTGCATCCCAACCTTCCTTCTGACAAGTCCCAGGATGCCACTTCCTCCAGTGCAGCCCAGCCGGAG 351
|.||||||||||||||||.||||.||.||||||||.||||||
Sbjct 371 ATAGAAGTGTGCATCCCAGCCTTTCTGCTGACAAGCCCCAGG-------------------------------- 412
Query 352 GTAATAGTTGTCCCTCTCTACCTGGTTAATACTGACAGAGGGCAAGAAGGCACTGCCAGACCTCCAACACCTCT 425
Sbjct 413 -------------------------------------------------------------------------- 412
Query 426 GGGGCCTCTTGGCTGCGTCCCCACAATCCCAGCGACTGCCTCTGCCGCCTCACCTCTGACCTTCCCGACTCTAG 499
Sbjct 413 -------------------------------------------------------------------------- 412
Query 500 ATGATTTCATTCCCCCTCATCTGCAGAGGTGGCCCCACCACAGCCAGCCAGCCCGCGCCTCTGGCTCCTTTGCC 573
Sbjct 413 -------------------------------------------------------------------------- 412
Query 574 CCCATTAGCCAGACGCCACCATCCTTCTCACCACCACCTCCGCTGGTCCCTCCTGCCCCGGAGGACCTCCGCAG 647
Sbjct 413 -------------------------------------------------------------------------- 412
Query 648 AGTCTCGGAGCCTGACCTCACGGGAGCTGTTTCGAGTACCGATTCCAGTCCTCTACTAAATGAAGTTTCTTCTT 721
.|||||||.|||||||.|||||||||||||
Sbjct 413 --------------------------------------------GCAGTCCTTTACTAAACGAAGTTTCTTCTT 442
Query 722 CCCTTATTGGAACTGATTCCCAAGCCTT---TCCATCAGTTAGCAAGCCTTCATCCGCCTATCCCTCCACAACG 792
|||..||||.|||.||||||||||.||| ||||.|| ||||..|||||.||.|||||.||||||||.||.
Sbjct 443 CCCACATTGAAACCGATTCCCAAGACTTCCCTCCAACA---AGCAGACCTTCGTCTGCCTACCCCTCCACCACC 513
Query 793 ATTGTCAATCCTACTATTGTGCTCTTGCAACACAATCGAGAACAGCAAAAACGACTCAGTAGCCTTTCAGATCC 866
||.|||||.|||||.|||||||||.||||.|||||||| ||||||
Sbjct 514 ATCGTCAACCCTACCATTGTGCTCCTGCAGCACAATCG------------------------------AGATCC 557
Query 867 TGTCTCAGAAAGAAGAGTGGGAGAGCAGGACTCAGCACCAACCCAGGAAAAACCCACCTCACCTGGCAAGGCTA 940
||.||||||.|||||||.|||.|||||||||.|||.||||||||..|.|.|||.|||.||.||.||||.||||.
Sbjct 558 TGCCTCAGAGAGAAGAGCGGGTGAGCAGGACCCAGTACCAACCCCAGCAGAACTCACTTCGCCCGGCAGGGCTT 631
Query 941 TTGAAAAAAGAGCAAAGGATGACAGTAGGCGGGTGGTGAAGAGCACTCAGGACTTAAGCGATGTTTCCATGGAT 1014
.|||.|.|||.||||||||||..||.||.||||||||||.||||||.||||||.|.||||||||.||.|..|||
Sbjct 632 CTGAGAGAAGGGCAAAGGATGCTAGCAGACGGGTGGTGAGGAGCACACAGGACCTGAGCGATGTGTCTACAGAT 705
Query 1015 GAAGTGGGCATCCCACTCCGGAACACTGAGAGATCAAAAGACTGGTACAAGACTATGTTTAAACAGATCCACAA 1088
|||||||||||||||||||||||.||.|||.||||.||||||||||||||.|||||||||||||||||||||||
Sbjct 706 GAAGTGGGCATCCCACTCCGGAATACCGAGCGATCGAAAGACTGGTACAAAACTATGTTTAAACAGATCCACAA 779
Query 1089 ACTGAACAGAGATGATGATTCAGATCTGTACTCTCCCAGATACTCATTTTCTGAAGACACAAAATCTCCCCTTT 1162
|||||||||||||||||||||.|||.|..|.||.||..||||.||.||.|||||.||||||||.||||||||||
Sbjct 780 ACTGAACAGAGATGATGATTCTGATGTCCATTCCCCTCGATATTCCTTCTCTGACGACACAAAGTCTCCCCTTT 853
Query 1163 CTGTGCCTCGCTCAAAAAGTGAGATGAGCTACATTGATGGTGAGAAGGTAGTCAAGAGGTCGGCCACACTACCC 1236
|||||||||||||||||||||||||||.||||||.||.||.|||||.||.||.||||||||.||||||||.||.
Sbjct 854 CTGTGCCTCGCTCAAAAAGTGAGATGAACTACATCGAAGGGGAGAAAGTGGTTAAGAGGTCCGCCACACTCCCG 927
Query 1237 CTCCCAGCCCGCTCTTCCTCACTGAAGTCAAGCTCAGAAAGAAATGACTGGGAACCCCCAGATAAGAAAGTAGA 1310
||||||||||||||.||||||||.|||||.|||.|.||||||||.||||||||.|||||||||||||||||.||
Sbjct 928 CTCCCAGCCCGCTCCTCCTCACTCAAGTCCAGCCCGGAAAGAAACGACTGGGAGCCCCCAGATAAGAAAGTGGA 1001
Query 1311 CACAAGAAAATATCGTGCAGAGCCCAAGAGCATTTACGAATATCAGCCTGGCAAGTCTTCCGTTCTGACCAACG 1384
.||.||||||||.||.|||||||||||.||||||||||||||||||||.|||||||||||.||.||||||||.|
Sbjct 1002 TACGAGAAAATACCGAGCAGAGCCCAAAAGCATTTACGAATATCAGCCGGGCAAGTCTTCGGTCCTGACCAATG 1075
Query 1385 AAAAGAT------------------------------------------------------------------- 1391
|.|||||
Sbjct 1076 AGAAGATGAGTCGGGATATAAGCCCAGAAGAGATAGATTTAAAGAATGAACCTTGGTATAAATTCTTTTCGGAA 1149
Query 1392 -------------------------------------------------------------------------- 1391
Sbjct 1150 TTGGAGTTTGGGAGACCGCCTCCCAAAAAGATATGGGACTATACTCCTGGAGACTGCTCTATCCTTCCTAGAGA 1223
Query 1392 -------------------------------------------------------------------------- 1391
Sbjct 1224 GGATAGAAAGACTAATCTAGAGAAAGATCTCAGCTTCTGCCAAGCAGAGTTAGAGGCAGATTTAGAGAAAGTGG 1297
Query 1392 -------------------------------------GAGCTCAGCCATCAGCCCTACTCCGGAAATTTCTTCA 1428
|||||||||..|||||||.|||||.||.|||.|.|||
Sbjct 1298 AGACCGTTAATAAATCACCCAGTGCAAACTCGCCACAGAGCTCAGCAGTCAGCCCGACTCCAGACATTACGTCA 1371
Query 1429 GAGACTCCTGGATATATATATTCTTCCAACTTCCATGCAGTGAAGAGGGAATCAGACGGGGCTCCTGGGGATCT 1502
|||.|||||||||||||.|||||||||||||||||||||||||||||.|||||.||||||.|.||.||||.|||
Sbjct 1372 GAGCCTCCTGGATATATCTATTCTTCCAACTTCCATGCAGTGAAGAGAGAATCGGACGGGACCCCCGGGGGTCT 1445
Query 1503 CACTAGCTTGGAGAATGAGAGACAAATTTATAAAAGTGTCTTGGAAGGTGGTGACATCCCTCTTCAGGGCCTGA 1576
|.|||||||||||||||||||.||.||.|||||.|||||||||||||||||.||||||||||||||||||||.|
Sbjct 1446 CGCTAGCTTGGAGAATGAGAGGCAGATCTATAAGAGTGTCTTGGAAGGTGGCGACATCCCTCTTCAGGGCCTCA 1519
Query 1577 GTGGGCTCAAGCGACCATCCAGCTCTGCTTCCACTAA------------------------------------- 1613
||||||||||||||||.||||||||.|||||||||||
Sbjct 1520 GTGGGCTCAAGCGACCTTCCAGCTCAGCTTCCACTAAAGTGGATCGTAAAGGCGGGAATGCTCACATGATTTCT 1593
Query 1614 -------------------------------------------------------------------------- 1613
Sbjct 1594 TCATCATCAGTTCATAGCCGAACGTTTCACACTAGCAATGCTTTAGGCCCTGGGTGTAAGCACAAGAAACCCCT 1667
Query 1614 -------------------------------------------------------------------------- 1613
Sbjct 1668 GTCGGCTGCGAAAGCCTGCATTTCGGAGATCCTTCCTTCTAAATTCAAACCCAGGCTCTCTGCTCCCAGCGCTC 1741
Query 1614 -------------------------------------------------------------------------- 1613
Sbjct 1742 TTTTGCAGGAACAGAAGAGTGTCCTGTTACCCTCAGAGAAGGCTCAGAGCTGTGAGAACCTCTGTGTGTCTTTG 1815
Query 1614 -------------------------------------------------------------------------- 1613
Sbjct 1816 AATGATTCCAAAAGAGGCCTCCCACTCCGGGTTGGGGGGAGCATCGAGAACCTGCTCATGCGCTCCCGGCGGGA 1889
Query 1614 -------------------------------------------------------------------------- 1613
Sbjct 1890 TTACGATAGCAAGTCCAGTAGTACCATGAGCCTGCAGGAGTACGGCACCAGCTCCAGGAGGCCCTGCCCTCTCT 1963
Query 1614 -------------------------------------------------------------------------- 1613
Sbjct 1964 CCAGAAAGGCTGGACTGCACTTCTCCATGTTCTACCGGGACATGCACCAGATCAACCGAGCTGGCCTCTCCCTG 2037
Query 1614 -------------------------------------------------------------------------- 1613
Sbjct 2038 GGCTCCATCTCCTCCTCAAGTGTGCGAGATCTTGCCTCCCACTTTGAAAGGAGCAGACTGACGTTAGCCAGGGG 2111
Query 1614 -------------------------------------------------------------------------- 1613
Sbjct 2112 TGAGCTGGGCGCTAGCCAAGAGGGCTCAGAGCATATCCCCAAGCACACCGTGTCCTCCCGCATCACGGCCTTTG 2185
Query 1614 -------------------------------------------------------------------------- 1613
Sbjct 2186 AGCAGCTCATTCAGCGGTCCCGGTCCATGCCGTCCCTGGACTTCTCTGGCCGGCTGAGCAAGTCCCCGACCCCT 2259
Query 1614 -------------------------------------------------------------------------- 1613
Sbjct 2260 GTGCTCTCTAGAAGCGGCCTGACCTCAGCTCGTTCAGCGGAATCCCTCCTCGAGTCTACCAAGCTCCGTCCCAG 2333
Query 1614 -------------------------------------------------------------------------- 1613
Sbjct 2334 AGAGATGGACGGGATGGACTCCGGAGGGGTCTATGCGTCGCCCACGTGTAGCAATATGGCGGACCACGCCTTGA 2407
Query 1614 -------------------------------------------------------------------------- 1613
Sbjct 2408 GCTTCCGGAGCCTTGTGCCCTCTGAGCCTCTTTCCATCTGCTCAGATGAGCTAGACCACTGCTCAAATGTTTCT 2481
Query 1614 -------------------------------------------------------------------------- 1613
Sbjct 2482 AACGACAGCAGGGAGGGCAGCGGGGGCAGTGTTCATGGAGACTTCCCCAAACATCGCCTCAACAAGTGCAAGGG 2555
Query 1614 -------------------------------------------------------------------------- 1613
Sbjct 2556 CACCTGCCCGGCTTCATACACCCGGTTCACCACTATCCGCAAGCATGAGCAGCAGTCGTCCAGGCAGTCAGACT 2629
Query 1614 -------------------------------------------------------------------------- 1613
Sbjct 2630 GGCGCTCGGATTCCAGGGGGGACAAGAACAGTCTCCTCAGAAACATCCACCTGATGAGTCCCCTCCCTTTTCGA 2703
Query 1614 -------------------------------------------------------------------------- 1613
Sbjct 2704 TTGAAAAAGCCCCTCCAACAGCACCCCAGACAGCCTCCCCCCAGTGACTCCTCAGAGTCCCCTGCTGGCCAGAA 2777
Query 1614 -------------------------------------------------------------------------- 1613
Sbjct 2778 AGCAGACCTTCCCTGCCACGACCCTCAGGACCAGCCCCACTCTGCGGGGAAACCCCTGGTCCCTGCTCGCCTGT 2851
Query 1614 -------------------------------------------------------------------------- 1613
Sbjct 2852 CTTCCCGACATACCATGGCAAGGCTTAGCCACAACCTAGAACCCCCTCTGGACAGACCCGCAGGCCTGGAGGAC 2925
Query 1614 -------------------------------------------------------------------------- 1613
Sbjct 2926 TGCACAAGGGCCATTAATAACGGGAACCCTGTGCCCTACTCAGACCATGGCTTGGACAGGAACAACAACCCACA 2999
Query 1614 ------------------------AGATTCAGAATCGCCAAGACATTTTATACCAGCTGATTACTTGGAATCCA 1663
|||||||||.||.||||||||||||||||||||||||||||||||.||||
Sbjct 3000 AAGTGAACTGGCAGCGGCCCATGGAGATTCAGAGTCACCAAGACATTTTATACCAGCTGATTACTTGGAGTCCA 3073
Query 1664 CGGAAGAATTTATTCGAAGACGTCATGATGATAAAGAGAAACTTTTAGCGGACCAGAGACGACTTAAACGCGAG 1737
|.||||||||||||||.|||||.||.|||||||||||||||||||||||||||||||||||||||||.||||||
Sbjct 3074 CAGAAGAATTTATTCGGAGACGGCACGATGATAAAGAGAAACTTTTAGCGGACCAGAGACGACTTAAGCGCGAG 3147
Query 1738 CAAGAAGAGGCTGATATTGCAGCTCGACGCCACACAGGCGTCATTCCGACGCACCATCAGTTTATCACTAATGA 1811
|||||||||||.||||||||||||||.|||||||||||.|||||.|||||.||.||||||||||||||||||||
Sbjct 3148 CAAGAAGAGGCCGATATTGCAGCTCGCCGCCACACAGGTGTCATCCCGACTCATCATCAGTTTATCACTAATGA 3221
Query 1812 GCGCTTTGGGGACCTCCTCAATATAGACGATACTGCAAAAAGGAAATCTGGGTCAGAG---------------- 1869
|||||||||||||||||||||||||||.|||||.||.||||||||||||||||.||||
Sbjct 3222 GCGCTTTGGGGACCTCCTCAATATAGATGATACGGCCAAAAGGAAATCTGGGTTAGAGATGAGACCTGCTCGAG 3295
Query 1870 --AAATATGACT-----GGGCA---------------------------------------------------- 1884
||||.||||| |..||
Sbjct 3296 CCAAATTTGACTTTAAAGCCCAGACCCTGAAGGAGCTGCCTCTGCAGAAGGGAGACGTTGTTTACATCTACAGA 3369
Query 1885 -------------------------------------------------------------------------- 1884
Sbjct 3370 CAGATTGACCAGAACTGGTATGAAGGTGAACACCATGGCCGGGTGGGAATCTTCCCACGCACCTATATCGAGCT 3443
Query 1885 -------------------------------------------------------------------------- 1884
Sbjct 3444 TCTTCCTCCAGCTGAGAAGGCTCAGCCCAGAAAGTTGGCACCCGTACAAGTTTTGGAATATGGAGAAGCCATTG 3517
Query 1885 -------------------------------------------------------------------------- 1884
Sbjct 3518 CGAAGTTTAACTTTAATGGAGATACACAAGTAGAAATGTCTTTCCGAAAGGGGGAGAGGATCACGCTGCTCCGA 3591
Query 1885 -------------------------------------------------------------------------- 1884
Sbjct 3592 CAGGTGGATGAGAACTGGTACGAAGGGAGGATTCCTGGGACATCTCGCCAAGGCATTTTCCCTATCACCTATGT 3665
Query 1885 -------------------------------------------------------------------------- 1884
Sbjct 3666 AGATGTGCTTAAGAGGCCATTGGTGAAAACCCCTGTGGATTACATCGACCTGCCTTATTCTTCTTCCCCAAGTC 3739
Query 1885 -------------------------------------------------------------------------- 1884
Sbjct 3740 GCAGTGCCACTGTGAGCCCACAGTATACTAGTCACAGCAAGCTCATCATGCCAGCCCCTTCATCTCTACCCCAC 3813
Query 1885 -------------------------------------------------------------------------- 1884
Sbjct 3814 CCCCGCCGAGCCCTGTCCCCTGAGATGCACGCCATCACCTCCGAGTGGATCTCTCTGACTGTCGGGGTCCCAGG 3887
Query 1885 -------------------------------------------------------------------------- 1884
Sbjct 3888 CAGGCGTTCTCTGGCCATGACACCACCCTTGCCTCCTCTGCCTGAGGCTTCTGTCTATGACATGGACCGCCTGG 3961
Query 1885 -------------------------------------------------------------------------- 1884
Sbjct 3962 CCTTGTCAGCAAGGGCCCGTCCCTCCTTGCCTCTCAGCCTCCCCTATTCAAGTTGGTCAGATCACTCCACCCTG 4035
Query 1885 -------------------------------------------------------------------------- 1884
Sbjct 4036 CGCCCAGTGGTCTCCCCGATGGCCCTGCCTCCACCCCACAAAGCCTACTCACTGGCACCCAGTGTCCAGGCTCC 4109
Query 1885 -------------------------------------------------------------------------- 1884
Sbjct 4110 TCTTCACGTCAATGGAGATGGTGGTATTCACATTCGCCAAGATGGCTTCTCCCAGCCACCACCTGGGAACTCTG 4183
Query 1885 -------------------------------------------------------------------------- 1884
Sbjct 4184 ATAGGGTCATCTCAGAGCTTAGTGACGCCTTTAGCAGCCAGAGCAAGAGACAGCCCTGGCGAGAAGATGGACCA 4257
Query 1885 -------------------------------------------------------------------------- 1884
Sbjct 4258 TATGACAGGAAAGCAGAGAGCGAGGCAGGTGAGAGATACCCTGGTGGACCCAAGATCTCTAAGAAGAGCTGCTT 4331
Query 1885 -------------------------------------------------------------------------- 1884
Sbjct 4332 GAAACCTTCAGACGTGGTCAGGTGCCTGAGTTCTGAGCAGAGACTCTCAGAGTTCCACACTCCTGAGGACAGTC 4405
Query 1885 -------------------------------------------------------------------------- 1884
Sbjct 4406 AGTCCTGCAAGCCCCTGGGTGGCCCTTTCCCAGCCTGGGAGACTGGGCCACCAGAGCTGCACAGAGCTGTCGAG 4479
Query 1885 -------------------------------------------------------------------------- 1884
Sbjct 4480 GCTGACAGGAAGGCTGCTCAGAGTGGTGTGAGCCAGCCTTCTCATCATTCATTGAGCGCAGGACCTGATCTCAC 4553
Query 1885 -------------------------------------------------------------------------- 1884
Sbjct 4554 AGAATCTGAAAAGAACTATGTGGAAGCGGTTTGCAATGAGATCATAAACATTGCGGAGAAATCTGTTCATTACT 4627
Query 1885 -------------------------------------------------------------------------- 1884
Sbjct 4628 GCAGCACTGTCTCTCATCCCCTTGACTTCCATCACAAGGTACCCCCTTCTGACAATAAATCATCTTTAATCATT 4701
Query 1885 -------------------------------------------------------------------------- 1884
Sbjct 4702 TCTCAGCAACCTCAAGCCCAGCAGCGAAGAGTCACCCCAGACAGGAGTCAGCCCTCACTGGATTTGTGTAGCTA 4775
Query 1885 -------------------------------------------------------------------------- 1884
Sbjct 4776 CCAAGCGTTATATAGTTATGTGCCACAGAACGATGATGAGTTGGAACTCCGAGATGGAGATATTGTTGATGTCA 4849
Query 1885 -------------------------------------------------------------------------- 1884
Sbjct 4850 TGGAAAAATGTGACGATGGATGGTTTGTTGGCACTTCGAGAAGGACGAGGCAGTTTGGTACTTTTCCAGGCAAC 4923
Query 1885 --------------------- 1884
Sbjct 4924 TATGTAAAACCTTTATATCTA 4944
