Nucleotide Global Alignment

Description

Query:
TRCN0000478401
Subject:
NM_001294334.1
Aligned Length:
2326
Identities:
1921
Gaps:
248

Alignment

Query    1  ---ATGGAAGAATTGCATAGCCTGGACCCACGACGGCAGGAATTATTGGAGGCCAGGTTTACTGGAGTAGGTGT  71
               |||||||||.||||||||||||||||||||.|||||||||||.|.|||||||||||.||||||||.|||||
Sbjct    1  ATGATGGAAGAACTGCATAGCCTGGACCCACGAAGGCAGGAATTACTAGAGGCCAGGTTCACTGGAGTTGGTGT  74

Query   72  TAGTAAGGGACCACTTAATAGTGAGTCTTCCAACCAGAGCTTGTGCAGCGTCGGATCCTTGAGTGATAAAGAAG  145
            .||||||||.|||||.||.||||||||||||||||||||..||||||||||.||.||.||||||||||||||||
Sbjct   75  AAGTAAGGGGCCACTCAACAGTGAGTCTTCCAACCAGAGTCTGTGCAGCGTGGGGTCGTTGAGTGATAAAGAAG  148

Query  146  TAGAGACTCCCGAGAAAAAGCAGAATGACCAGCGAAATCGGAAAAGAAAAGCTGAACCATATGAAACTAGCCAA  219
            ||||||||||.|||||||||||||||||||||||||||||||||||.|||||.||.||||||||.|||||||||
Sbjct  149  TAGAGACTCCTGAGAAAAAGCAGAATGACCAGCGAAATCGGAAAAGGAAAGCCGAGCCATATGACACTAGCCAA  222

Query  220  GGGAAAGGCACTCCTAGGGGACATAAAATTAGTGATTACTTTGAGTTTGCTGGGGGAAGCGCGCCAGGAACCAG  293
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||||||
Sbjct  223  GGGAAAGGCACTCCTAGGGGACATAAAATTAGTGATTACTTTGAGTTTGCTGGGGGAAGCGGGCCAGGAACCAG  296

Query  294  CCCTGGCAGAAGTGTTCCACCAGTTGCACGATCCTCACCGCAACATTCCTTATCCAATCCCTTACCGCGACGAG  367
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||
Sbjct  297  CCCTGGCAGAAGTGTTCCACCAGTTGCACGATCCTCACCGCAACATTCCTTATCCAATCCCTTACCGCGTCGAG  370

Query  368  TAGAACAGCCCCTCTATGGTTTAGATGGCAGTGCTGCAAAGGAGGCAACGGAGGAGCAGTCTGCTCTGCCAACC  441
            .|||||||||.||.||||||||||||||||||||.|||||||||||..|.||.|||||||||||||||||.|||
Sbjct  371  CAGAACAGCCTCTGTATGGTTTAGATGGCAGTGCAGCAAAGGAGGCCTCAGAAGAGCAGTCTGCTCTGCCCACC  444

Query  442  CTCATGTCAGTGATGCTAGCAAAACCTCGGCTTGACACAGAGCAGCTGGCGCAAAGGGGAGCTGGCCTCTGCTT  515
            |||||||||||||||.||||||||||.||.|||||||||||||||.|.||||.|.|||||||||||||||||||
Sbjct  445  CTCATGTCAGTGATGTTAGCAAAACCGCGACTTGACACAGAGCAGTTAGCGCCACGGGGAGCTGGCCTCTGCTT  518

Query  516  CACTTTTGTTTCAGCTCAGCAAAACAGTCCCTCATCTACGGGATCTGGCAACACAGAGCATTCCTGCAGCTCCC  589
            ||||||.||.||.|||||.|||||||||||.||.||||||||.||||||||.|||||.|||||.||||||||||
Sbjct  519  CACTTTCGTCTCTGCTCAACAAAACAGTCCTTCTTCTACGGGTTCTGGCAATACAGAACATTCTTGCAGCTCCC  592

Query  590  AAAAACAGATCTCCATCCAGCACAGACAGACCCAGTCCGACCTCACAATAGAAAAAATATCTGCACTAGAAAAC  663
            |||||||||||||||||||||||||||||||||||||.||||||||||||||||||||||||||||||||||||
Sbjct  593  AAAAACAGATCTCCATCCAGCACAGACAGACCCAGTCTGACCTCACAATAGAAAAAATATCTGCACTAGAAAAC  666

Query  664  AGTAAGAATTCTGACTTAGAGAAGAAGGAGGGAAGAATAGATGATTTATTAAGAGCCAACTGTGATTTGAGACG  737
            ||||||||.||||||||||||||||||||.||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  AGTAAGAACTCTGACTTAGAGAAGAAGGAAGGAAGAATAGATGATTTATTAAGAGCCAACTGTGATTTGAGACG  740

Query  738  GCAGATTGATGAACAGCAAAAGATGCTAGAGAAATACAAGGAACGATTAAATAGATGTGTGACAATGAGCAAGA  811
            .|||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||.||.||||||||||
Sbjct  741  ACAGATAGATGAACAGCAAAAGATGCTAGAGAAATACAAGGAACGATTAAATAGATGTGTCACCATGAGCAAGA  814

Query  812  AACTCCTTATAGAAAAGTCAAAACAAGAGAAGATGGCGTGTAGAGATAAGAGCATGCAAGACCGCTTGAGACTG  885
            |.||||||||||||||||||||||||||||||||||||||.|||||||||||||||||.|||||.|||.||.|.
Sbjct  815  AGCTCCTTATAGAAAAGTCAAAACAAGAGAAGATGGCGTGCAGAGATAAGAGCATGCAGGACCGATTGCGATTA  888

Query  886  GGCCACTTTACTACTGTCCGACACGGAGCCTCATTTACTGAACAGTGGACAGATGGTTATGCTTTTCAGAATCT  959
            ||||||||||||||||||||.||.||||||||.||||||||.|||||||||||||||||||||||.||.||.||
Sbjct  889  GGCCACTTTACTACTGTCCGGCATGGAGCCTCGTTTACTGAGCAGTGGACAGATGGTTATGCTTTCCAAAACCT  962

Query  960  TATCAAGCAACAGGAAAGGATAAATTCACAGAGGGAAGAGATAGAAAGACAACGGAAAATGTTAGCAAAGCGGA  1033
            .||||||||||||||||||||||||||||||||.||||||||||||||.||||||||||||||||||||.||||
Sbjct  963  CATCAAGCAACAGGAAAGGATAAATTCACAGAGAGAAGAGATAGAAAGGCAACGGAAAATGTTAGCAAAACGGA  1036

Query 1034  AACCTCCTGCCATGGGTCAGGCCCCTCCTGCAACCAATGAGCAGAAACAGCGGAAAAGCAAGACCAATGGAGCT  1107
            |||||||||||||||||||||||||||||||||||||||||||||||||.||||||||||||||.|||||||||
Sbjct 1037  AACCTCCTGCCATGGGTCAGGCCCCTCCTGCAACCAATGAGCAGAAACAACGGAAAAGCAAGACTAATGGAGCT  1110

Query 1108  GAAAATGAAACGCCCTCTTCTGGGAATACAGAGCTAAAGGATACAGCCCCAGCCTTAGGAGCCCACAGTTTACT  1181
            |||||||||||                                                               
Sbjct 1111  GAAAATGAAAC---------------------------------------------------------------  1121

Query 1182  TAGGTTAACGTTAGCAGAATACCATGAACAAGAAGAAATCTTCAAACTCAGATTAGGTCATCTTAAAAAGGAGG  1255
               ||||||||||||.||.||||||||||||||.||||||||||||||.|||||||||||||||||.||.||||
Sbjct 1122  ---GTTAACGTTAGCCGAGTACCATGAACAAGAGGAAATCTTCAAACTTAGATTAGGTCATCTTAAGAAAGAGG  1192

Query 1256  AAGCAGAGATCCAGGCAGAGCTGGAGAGACTAGAAAGGGTTAGAAATCTACATATCAGGGAACTAAAAAGGATA  1329
            |||||||.|||||||||||||||||.||.||.|||||||||||.||||||||.|||||||||.|||||||||||
Sbjct 1193  AAGCAGAAATCCAGGCAGAGCTGGAAAGGCTGGAAAGGGTTAGGAATCTACACATCAGGGAATTAAAAAGGATA  1266

Query 1330  CATAATGAAGATAATTCACAATTTAAAGATCATCCAACGCTAAATGACAGATATTTGTTGTTACATCTTTTGGG  1403
            |||||||||||.|||||.||.||||||||.||||||||.|||||||||||||||||||||||||||||||||||
Sbjct 1267  CATAATGAAGACAATTCGCAGTTTAAAGACCATCCAACACTAAATGACAGATATTTGTTGTTACATCTTTTGGG  1340

Query 1404  TAGAGGAGGTTTCAGTGAAGTTTACAAGGCATTTGATCTAACAGAGCAAAGATACGTAGCTGTGAAAATTCACC  1477
            ||||||||||||||||||||||||||||||||||||||||||.|||||||||||.|||||||||||||||||||
Sbjct 1341  TAGAGGAGGTTTCAGTGAAGTTTACAAGGCATTTGATCTAACGGAGCAAAGATATGTAGCTGTGAAAATTCACC  1414

Query 1478  AGTTAAATAAAAACTGGAGAGATGAGAAAAAGGAGAATTACCACAAGCATGCATGTAGGGAATACCGGATTCAT  1551
            ||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||||||||||||||.
Sbjct 1415  AGTTAAATAAAAACTGGAGAGATGAGAAAAAGGAGAATTACCACAAGCATGCGTGTAGGGAATACCGGATTCAC  1488

Query 1552  AAAGAGCTGGATCATCCCAGAATAGTTAAGCTGTATGATTACTTTTCACTGGATACTGACTCGTTTTGTACAGT  1625
            ||.||||||||.||.|||||.|||||.||||||||||||||||||||||||||.||||||||||||||||||||
Sbjct 1489  AAGGAGCTGGACCACCCCAGGATAGTGAAGCTGTATGATTACTTTTCACTGGACACTGACTCGTTTTGTACAGT  1562

Query 1626  ATTAGAATACTGTGAGGGAAATGATCTGGACTTCTACCTGAAACAGCACAAATTAATGTCGGAGAAAGAGGCCC  1699
            |||||||||||||||.||.|||||.||||||||||||||.|||||||||||||||||||||||||||||.||||
Sbjct 1563  ATTAGAATACTGTGAAGGGAATGACCTGGACTTCTACCTAAAACAGCACAAATTAATGTCGGAGAAAGAAGCCC  1636

Query 1700  GGTCCATTATCATGCAGATTGTGAATGCTTTAAAGTACTTAAATGAAATAAAACCTCCCATCATACACTATGAC  1773
            |.||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1637  GATCCATTATTATGCAGATTGTGAATGCTTTAAAGTACTTAAATGAAATAAAACCTCCCATCATACACTATGAC  1710

Query 1774  CTCAAACCAGGTAATATTCTTTTAGTAAATGGTACAGCGTGTGGAGAGATAAAAATTACAGATTTTGGTCTTTC  1847
            |||||||||||||||||.||||||||||||||||||||.|||||||||||||||||||||||||||||||||||
Sbjct 1711  CTCAAACCAGGTAATATCCTTTTAGTAAATGGTACAGCATGTGGAGAGATAAAAATTACAGATTTTGGTCTTTC  1784

Query 1848  GAAGATCATGGATGATGATAGCTACAATTCAGTGGATGGCATGGAGCTAACATCACAAGGTGCTGGTACTTATT  1921
            .|||||||||||||||||||||||||||||||||||||||||||||||.||.||||||||.|||||||||||||
Sbjct 1785  CAAGATCATGGATGATGATAGCTACAATTCAGTGGATGGCATGGAGCTGACGTCACAAGGAGCTGGTACTTATT  1858

Query 1922  GGTATTTACCACCAGAGTGTTTTGTGGTTGGGAAAGAACCACCAAAGATCTCAAATAAAGTTGATGTGTGGTCG  1995
            |||||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||.|||||.|||||.
Sbjct 1859  GGTATTTACCACCAGAGTGTTTTGTGGTTGGGAAAGAGCCACCAAAGATCTCAAATAAAGTCGATGTTTGGTCA  1932

Query 1996  GTGGGTGTGATCTTCTATCAGTGTCTTTATGGAAGGAAGCCTTTTGGCCATAACCAGTCTCAGCAAGACATCCT  2069
            |||||||||||||||||.||||||||||||||.||||||                   .|.||.|||       
Sbjct 1933  GTGGGTGTGATCTTCTACCAGTGTCTTTATGGGAGGAAG-------------------GTGAGGAAG-------  1980

Query 2070  ACAAGAGAATACGATTCTTAAAGCTACTGAAGTGCAGTTCCC----GCCAAAGCCAGTAGTAACACCTGAAGCA  2139
              |||                       |.||||.||...||    ||||.|.||      |.|||||    ||
Sbjct 1981  --AAG-----------------------GCAGTGGAGCAGCCTGGGGCCATACCC------ACCACCT----CA  2019

Query 2140  AAGGCGTTTATTC------GACGATGCTTGGCCTACCGAAAGGAGGACCGCATTGATGTCCAGCAGCTGGCCTG  2207
            ..|| |.||.|||      |...||..||||..|.|.|||||.||        ||.|.|..||.|         
Sbjct 2020  CTGG-GATTCTTCTTTGCAGTTAATCATTGGAATCCTGAAAGTAG--------TGGTTTAAAGAA---------  2075

Query 2208  TGATCCCTACTTGTTGCCTCACATCCGAAAGTCAGTCTCTACAAGTAGCCCTGCTGGAGCTGCTATTGCATCAA  2281
             .||.|..||||     ||||.                                                    
Sbjct 2076  -AATACAGACTT-----CTCAG----------------------------------------------------  2091

Query 2282  CCTCTGGGGCGTCCAATAACAGTTCTTCTAAT  2313
                                            
Sbjct 2092  --------------------------------  2091

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