Nucleotide Global Alignment

Description

• Query: TRCN0000478713
• Subject: NM_001017975.5
• Aligned Length: 4309
• Identities: 1405
• Gaps: 2900

Alignment

Query    1  ATGCTGAAATCAAATGATTGCCTGTTTTCTTTGGAAAATTTGTTTTTTGAAAAACCAGATGAAGTTGAAAACCA  74
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct    1  ATGCTGAAATCAAATGATTGCCTGTTTTCTTTGGAAAATTTGTTTTTTGAAAAACCAGATGAAGTTGAAAACCA  74

Query   75  TCCAGACAATGAAAAGTCATTGGATTGGTTTCTCCCTCCTGCTCCATTGATTTCAGAAATTCCAGATACTCAGG  148
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   75  TCCAGACAATGAAAAGTCATTGGATTGGTTTCTCCCTCCTGCTCCATTGATTTCAGAAATTCCAGATACTCAGG  148

Query  149  AGTTAGAGGAAGAATTAGAAAGTCATAAACTGTTAGGTCAGGAAAAGAGGCCAAAAATGTTAACATCAAATTTA  222
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  AGTTAGAGGAAGAATTAGAAAGTCATAAACTGTTAGGTCAGGAAAAGAGGCCAAAAATGTTAACATCAAATTTA  222

Query  223  AAGATAACTAATGAAGATACAAATTATATTTCACTAACACAAAAATTCCAGTTTGCCTTTCCTTCTGATAAATA  296
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  AAGATAACTAATGAAGATACAAATTATATTTCACTAACACAAAAATTCCAGTTTGCCTTTCCTTCTGATAAATA  296

Query  297  TGAACAGGATGATCTAAATTTAGAAGGGGTAGGTAATAATGACTTATCACATGTTGCTGGCAAGCTGACATATG  370
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  TGAACAGGATGATCTAAATTTAGAAGGGGTAGGTAATAATGACTTATCACATGTTGCTGGCAAGCTGACATATG  370

Query  371  CTTCTCAGAAATATAAAAATCACATTGGCACTGAGATAGCACCTGAGAAGAGTGTTCCTGATGATACAAAATTA  444
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  CTTCTCAGAAATATAAAAATCACATTGGCACTGAGATAGCACCTGAGAAGAGTGTTCCTGATGATACAAAATTA  444

Query  445  GTTAATTTTGCAGAAGATAAAGGAGAGAGCACATCAGTATTCCGGAAAAGATTATTTAAAATATCTGACAATAT  518
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  GTTAATTTTGCAGAAGATAAAGGAGAGAGCACATCAGTATTCCGGAAAAGATTATTTAAAATATCTGACAATAT  518

Query  519  ACATGGGAGTGCTTATTCTAATGACAATGAATTGGACTCTCACATTGGCTCAGTGAAAATTGTACAAACAGAAA  592
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  ACATGGGAGTGCTTATTCTAATGACAATGAATTGGACTCTCACATTGGCTCAGTGAAAATTGTACAAACAGAAA  592

Query  593  TGAACAAAGGGAAATCAAGGAACTATAGCAATAGTAAGCAGAAATTTCAGTATTCTGCAAATGTGTTTACAGCA  666
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  TGAACAAAGGGAAATCAAGGAACTATAGCAATAGTAAGCAGAAATTTCAGTATTCTGCAAATGTGTTTACAGCA  666

Query  667  AATAATGCTTTTTCTGCTTCTGAAATCGGAGAAGGCATGTTCAAAGCACCATCTTTTTCAGTTGCTTTCCAACC  740
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  AATAATGCTTTTTCTGCTTCTGAAATCGGAGAAGGCATGTTCAAAGCACCATCTTTTTCAGTTGCTTTCCAACC  740

Query  741  TCATGATATTCAAGAGGTAACAGAAAATGGTTTAGGTTCCTTGAAGGCTGTCACAGAAATTCCGGCAAAATTTA  814
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  741  TCATGATATTCAAGAGGTAACAGAAAATGGTTTAGGTTCCTTGAAGGCTGTCACAGAAATTCCGGCAAAATTTA  814

Query  815  GAAGTATTTTCAAAGAATTTCCATATTTCAACTATATACAGTCCAAGGCCTTTGATGATCTTCTTTACACAGAT  888
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  815  GAAGTATTTTCAAAGAATTTCCATATTTCAACTATATACAGTCCAAGGCCTTTGATGATCTTCTTTACACAGAT  888

Query  889  AGGAATTTTGTGATTTGTGCTCCAACTGGTTCTGGAAAAACTGTAGTGTTTGAACTAGCTATAACAAGATTGTT  962
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  889  AGGAATTTTGTGATTTGTGCTCCAACTGGTTCTGGAAAAACTGTAGTGTTTGAACTAGCTATAACAAGATTGTT  962

Query  963  AATGGAAGTACCATTGCCATGGTTGAATATTAAAATTGTTTACATGGCACCAATAAAAGCCTTGTGCAGTCAGC  1036
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  963  AATGGAAGTACCATTGCCATGGTTGAATATTAAAATTGTTTACATGGCACCAATAAAAGCCTTGTGCAGTCAGC  1036

Query 1037  GTTTTGATGACTGGAAAGAAAAATTTGGACCAATAGGATTGAATTGTAAAGAACTTACTGGAGATACAGTAATG  1110
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037  GTTTTGATGACTGGAAAGAAAAATTTGGACCAATAGGATTGAATTGTAAAGAACTTACTGGAGATACAGTAATG  1110

Query 1111  GATGATCTATTTGAGATTCAGCATGCCCATATTATTATGACAACTCCAGAAAAATGGGATAGCATGACTAGGAA  1184
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111  GATGATCTATTTGAGATTCAGCATGCCCATATTATTATGACAACTCCAGAAAAATGGGATAGCATGACTAGGAA  1184

Query 1185  ATGGAGAGACAACTCTTTGGTTCAGCTGGTTCGACTGTTTCTCATTGATGAGGTACATATTGTAAAAGATGAAA  1258
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185  ATGGAGAGACAACTCTTTGGTTCAGCTGGTTCGACTGTTTCTCATTGATGAGGTACATATTGTAAAAGATGAAA  1258

Query 1259  ATCGTGGTCCAACTCTTGAAGTTGTAGTTAGCAGAATGAAAACTGTACAGTCTGTTTCTCAGACTTTAAAAAAT  1332
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259  ATCGTGGTCCAACTCTTGAAGTTGTAGTTAGCAGAATGAAAACTGTACAGTCTGTTTCTCAGACTTTAAAAAAT  1332

Query 1333  ACCAGCACTGCTATTCCAATGCGATTTGTAGCTGTATCTGCAACAATTCCAAATGCTGAGGATGTGAGTT--AC  1404
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    .||  |.
Sbjct 1333  ACCAGCACTGCTATTCCAATGCGATTTGTAGCTGTATCTGCAACAATTCCAAATGCTGAGGAT----ATTGCAG  1402

Query 1405  AAT---TTTAAC--------------------------------------------------------------  1413
            |||   |||.|.                                                              
Sbjct 1403  AATGGCTTTCAGATGGTGAAAGACCAGCTGTGTGTCTGAAAATGGATGAGAGCCATAGACCAGTGAAACTTCAG  1476

Query 1414  --------------------------------------------------------------------------  1413
                                                                                      
Sbjct 1477  AAAGTGGTCCTTGGATTTCCCTGCAGTAGTAACCAAACTGAGTTTAAGTTTGATTTAACCCTCAACTACAAAAT  1550

Query 1414  --------------------------------------------------------------------------  1413
                                                                                      
Sbjct 1551  TGCCAGTGTTATACAAATGTACTCTGATCAGAAACCCACACTTGTGTTTTGTGCAACAAGGAAGGGTGTGCAAC  1624

Query 1414  --------------------------------------------------------------------------  1413
                                                                                      
Sbjct 1625  AGGCTGCTTCTGTTCTTGTGAAAGATGCTAAATTTATTATGACTGTGGAACAGAAACAGAGGTTACAGAAGTAT  1698

Query 1414  --------------------------------------------------------------------------  1413
                                                                                      
Sbjct 1699  GCATATTCCGTAAGAGATTCAAAACTGAGAGATATCTTAAAAGATGGTGCTGCTTATCATCATGCTGGTATGGA  1772

Query 1414  --------------------------------------------------------------------------  1413
                                                                                      
Sbjct 1773  GCTGTCAGATAGAAAAGTAGTTGAGGGAGCTTTTACTGTTGGAGATTTACCAGTTCTTTTTACTACCAGTACTT  1846

Query 1414  --------------------------------------------------------------------------  1413
                                                                                      
Sbjct 1847  TAGCTATGGGAGTAAATTTGCCTGCTCACCTAGTAGTTATAAAATCTACAATGCATTATGCTGGAGGACTGTTT  1920

Query 1414  --------------------------------------------------------------------------  1413
                                                                                      
Sbjct 1921  GAAGAGTACAGTGAAACAGATATTCTACAGATGATTGGTAGAGCTGGTCGACCTCAATTTGACACTACAGCTAC  1994

Query 1414  --------------------------------------------------------------------------  1413
                                                                                      
Sbjct 1995  TGCAGTTATCATGACTCGATTAAGCACAAGGGACAAGTACATTCAGATGTTAGCTTGTAGAGACACTGTAGAAA  2068

Query 1414  --------------------------------------------------------------------------  1413
                                                                                      
Sbjct 2069  GCAGTTTGCACAGACATCTTATTGAACATTTAAATGCAGAGATAGTACTGCATACCATCACGGATGTGAATATT  2142

Query 1414  --------------------------------------------------------------------------  1413
                                                                                      
Sbjct 2143  GCTGTGGAATGGATACGATCAACTCTGCTTTATATCAGAGCCTTGAAAAATCCATCTCATTATGGTTTTGCATC  2216

Query 1414  --------------------------------------------------------------------------  1413
                                                                                      
Sbjct 2217  TGGATTGAACAAAGATGGAATTGAAGCAAAATTACAAGAATTATGTTTGAAGAATCTGAATGATTTATCATCCC  2290

Query 1414  --------------------------------------------------------------------------  1413
                                                                                      
Sbjct 2291  TGGACTTAATAAAGATGGATGAAGGTGTTAATTTCAAACCAACTGAAGCAGGAAGATTGATGGCTTGGTATTAT  2364

Query 1414  --------------------------------------------------------------------------  1413
                                                                                      
Sbjct 2365  ATTACATTTGAGACAGTGAAGAAATTTTATACAATCAGTGGAAAAGAAACCTTATCAGATCTGGTTACATTGAT  2438

Query 1414  --------------------------------------------------------------------------  1413
                                                                                      
Sbjct 2439  AGCTGGCTGCAAGGAATTTCTAGATATACAGTTAAGGATAAATGAAAAGAAAACACTGAATACTTTGAACAAAG  2512

Query 1414  --------------------------------------------------------------------------  1413
                                                                                      
Sbjct 2513  ATCCAAATCGGATAACTATCAGATTTCCAATGGAAGGAAGAATTAAAACAAGAGAAATGAAAGTAAATTGTCTT  2586

Query 1414  --------------------------------------------------------------------------  1413
                                                                                      
Sbjct 2587  ATTCAGGCTCAACTAGGATGCATTCCCATACAAGATTTTGCTTTGACACAAGATACCGCAAAGATTTTCAGACA  2660

Query 1414  --------------------------------------------------------------------------  1413
                                                                                      
Sbjct 2661  TGGCTCCCGAATTACAAGATGGTTGTCAGATTTTGTAGCTGCTCAAGAAAAGAAGTTTGCTGTACTATTGAATA  2734

Query 1414  --------------------------------------------------------------------------  1413
                                                                                      
Sbjct 2735  GTTTGATTTTAGCTAAATGTTTTAGGTGTAAACTTTGGGAAAACTCTCTGCATGTATCCAAACAACTGGAAAAA  2808

Query 1414  --------------------------------------------------------------------------  1413
                                                                                      
Sbjct 2809  ATTGGTATAACATTGTCAAATGCAATCGTAAATGCTGGTTTGACTTCCTTTAAAAAAATAGAAGAGACAGATGC  2882

Query 1414  --------------------------------------------------------------------------  1413
                                                                                      
Sbjct 2883  AAGGGAACTTGAATTGATTTTAAACAGACATCCCCCCTTTGGAACCCAGATAAAAGAAACTGTGATGTATCTAC  2956

Query 1414  --------------------------------------------------------------------------  1413
                                                                                      
Sbjct 2957  CAAAATATGAACTTAAAGTGGAACAGATTACAAGATATAGTGATACGACGGCAGAAATATTAGTGACTGTTATA  3030

Query 1414  --------------------------------------------------------------------------  1413
                                                                                      
Sbjct 3031  TTAAGAAATTTTGAACAGCTACAAACTAAAAGAACAGCATCGGATTCTCACTATGTTACCTTAATCATAGGTGA  3104

Query 1414  --------------------------------------------------------------------------  1413
                                                                                      
Sbjct 3105  CGCAGATAATCAAGTAGTTTATCTGCACAAGATTACGGATTCTGTTTTGCTAAAAGCTGGAAGTTGGGCTAAAA  3178

Query 1414  --------------------------------------------------------------------------  1413
                                                                                      
Sbjct 3179  AGATTGCTGTGAAAAGAGCTCTTAAATCTGAAGATCTTAGCATAAATCTAATAAGTTCTGAATTTGTTGGGCTT  3252

Query 1414  --------------------------------------------------------------------------  1413
                                                                                      
Sbjct 3253  GATATTCAGCAGAAACTTACAGTCTTTTACTTAGAACCCAAGAGGTTTGGAAATCAAATCACTATGCAAAGAAA  3326

Query 1414  --------------------------------------------------------------------------  1413
                                                                                      
Sbjct 3327  ATCTGAAACACAGATTTCCCATTCTAAACATTCAGACATATCTACAATAGCAGGACCTAATAAAGGAACGACTG  3400

Query 1414  --------------------------------------------------------------------------  1413
                                                                                      
Sbjct 3401  CCAGCAAAAAACCTGGGAACCGAGAATGCAATCATCTTTGTAAAAGTAAACATACATGTGGACATGACTGCTGT  3474

Query 1414  --------------------------------------------------------------------------  1413
                                                                                      
Sbjct 3475  AAAATTGGAGTTGCACAGAAGTCAGAAATTAAAGAGTCAACAATTTCTTCATATTTATCTGATTTAAGAAACAG  3548

Query 1414  --------------------------------------------------------------------------  1413
                                                                                      
Sbjct 3549  GAATGCTGTTTCATCTGTTCCTCCAGTTAAACGTCTGAAGATACAGATGAATAAATCTCAAAGTGTGGACCTTA  3622

Query 1414  --------------------------------------------------------------------------  1413
                                                                                      
Sbjct 3623  AAGAGTTTGGTTTTACTCCAAAACCTTCCCTTCCTAGTATATCAAGGTCAGAATATTTAAACATATCTGAATTG  3696

Query 1414  --------------------------------------------------------------------------  1413
                                                                                      
Sbjct 3697  CCTATAATGGAGCAGTGGGATCAGCCTGAAATCTATGGAAAAGTTAGACAAGAACCATCTGAATATCAAGACAA  3770

Query 1414  --------------------------------------------------------------------------  1413
                                                                                      
Sbjct 3771  AGAAGTTTTGAATGTGAACTTTGAATTGGGAAATGAAGTTTGGGATGATTTTGATGATGAAAACTTAGAAGTTA  3844

Query 1414  --------------------------------------------------------------------------  1413
                                                                                      
Sbjct 3845  CTAGCTTTTCAACTGATACTGAGAAGACAAAAATATCAGGATTTGGAAACACTTTGAGTTCAAGTACCAGGGGA  3918

Query 1414  --------------------------------------------------------------------------  1413
                                                                                      
Sbjct 3919  AGTAAGCTACCCCTTCAAGAGTCAAAGAGCAAATTCCAAAGAGAAATGTCAAACAGTTTTGTTTCATCACATGA  3992

Query 1414  --------------------------------------------------------------------------  1413
                                                                                      
Sbjct 3993  GATGTCGGATATTTCTTTATCAAATTCTGCTATGCCCAAGTTCAGTGCATCCTCCATGACAAAATTACCTCAAC  4066

Query 1414  --------------------------------------------------------------------------  1413
                                                                                      
Sbjct 4067  AAGCTGGAAATGCAGTTATTGTCCATTTTCAAGAAAGAAAACCACAAAATCTGTCACCAGAGATTGAGAAGCAA  4140

Query 1414  --------------------------------------------------------------------------  1413
                                                                                      
Sbjct 4141  TGCTTTACTTTCTCTGAAAAAAACCCAAATTCTTCAAATTATAAAAAAGTGGATTTTTTTATTAGAAACAGTGA  4214

Query 1414  --------------------------------------------------------------------------  1413
                                                                                      
Sbjct 4215  ATGTAAAAAGGAAGTTGATTTCAGTATGTATCATCCTGATGATGAAGCTGATGAAATGAAGTCTTTATTGGGAA  4288

Query 1414  -----------------  1413
                             
Sbjct 4289  TATTTGATGGTATTTTC  4305