Nucleotide Global Alignment

Description

• Query: TRCN0000479008
• Subject: XM_006498467.2
• Aligned Length: 1385
• Identities: 932
• Gaps: 307

Alignment

Query    1  ATGGTCAACGACCGGTGGAAGACCATGGGCGGCGCTGCCCAACTTGAGGACCGGCCGCGCGACAAGCCGCAGCG  74
            ||||||.||||.||||||||||||.|||||.||||..||||||||||||||||.|||||||||||.||||||||
Sbjct    1  ATGGTCCACGAGCGGTGGAAGACCGTGGGCAGCGCGTCCCAACTTGAGGACCGACCGCGCGACAAACCGCAGCG  74

Query   75  GCCGAGCTGCGGCTACGTGCTGTGCACCGTGCTGCTGGCCCTGGCTGTGCTGCTGGCTGTAGCTGTCACCGGTG  148
            ..|.||||||.|.||.||.||||||||.|||||.|||.||||.||.|||||||||||.||.|||||||||||||
Sbjct   75  AGCAAGCTGCAGTTATGTCCTGTGCACGGTGCTCCTGTCCCTTGCGGTGCTGCTGGCGGTGGCTGTCACCGGTG  148

Query  149  CCGTGCTCTTCCTGAACCACGCCCACGCGCCGGGCACGGCGCCCCCACCTGTCGTCAGCACTGGGGCTGCCAGC  222
            ..||.|||||||||||||||.|||||.|.||.|||||||||||||||||..||||||||||.|||.|||||.|.
Sbjct  149  TGGTTCTCTTCCTGAACCACACCCACACACCAGGCACGGCGCCCCCACCCATCGTCAGCACGGGGACTGCCGGA  222

Query  223  GCCAACAGCGCCGTGGTCACTGTGGAAAGGGCGGACAGCTCGCACCTCAGCATCCTCATTGACCCGCGCTGCCC  296
            ||||||||.|||.|||||||||||||.|||||.||||||||.|||||||||.|.|||||.|||||.||||||||
Sbjct  223  GCCAACAGTGCCCTGGTCACTGTGGAGAGGGCTGACAGCTCCCACCTCAGCCTTCTCATCGACCCTCGCTGCCC  296

Query  297  CGACCTCACCGACAGCTTCGCACGCCTGGAGAGCGCCCAGGCCTCGGTGCTGCAGGCGCTGACAGAGCACCAGG  370
            |||||||||.|||||||||||.||||||||..||..|||||||||..|.||.|.|||.||||..||||||||||
Sbjct  297  CGACCTCACTGACAGCTTCGCCCGCCTGGAAGGCATCCAGGCCTCCATCCTTCGGGCACTGAGTGAGCACCAGG  370

Query  371  CCCAGCCACGGCTGGTGGGCGACCAGGAGCAGGAGCTGCTGGACACGCTGGCCGACCAGCTGCCCCGGCTGCTG  444
            |.|||||..||||||..||.|.|      |..||||||||||||.|.|||||.||||||||||||||||||||.
Sbjct  371  CACAGCCGAGGCTGGACGGTGCC------CCCGAGCTGCTGGACGCACTGGCTGACCAGCTGCCCCGGCTGCTA  438

Query  445  GCCCGAGCCTCAGAGCTGCAGACGGA--GTGCATGGGGCTGCGGAAGGGGCATGGCACGCTGGGCCAGGGCCTC  516
            .||||.|||||.|||||||||.|.||  ||||  .||||||||.|||||.||..||..||||||||||||||||
Sbjct  439  ACCCGGGCCTCTGAGCTGCAGGCTGAATGTGC--TGGGCTGCGCAAGGGACACAGCCTGCTGGGCCAGGGCCTC  510

Query  517  AGCGCCCTGCAGAGTGAGCAGGGCCGCCTCATCCAGCTTCTCTCTGAGAGCCAGGGCCACATGGCTCACCTGGT  590
            |||.|||||||||||||.|||||.|||||||||||                                       
Sbjct  511  AGCACCCTGCAGAGTGAACAGGGTCGCCTCATCCA---------------------------------------  545

Query  591  GAACTCCGTCAGCGACATCCTGGATGCCCTGCAGAGGGACCGGGGGCTGGGCCGGCCCCGCAACAAGGCCGACC  664
                                                                                      
Sbjct  546  --------------------------------------------------------------------------  545

Query  665  TTCAGAGAGCGCCTGCCCGGGGAACCCGGCCCCGGGGCTGTGCCACTGGCTCCCGGCCCCGAGACTGTCTGGAC  738
                                                                                      
Sbjct  546  --------------------------------------------------------------------------  545

Query  739  GTCCTCCTAAGCGGACAGCAGGACGATGGCGTCTACTCTGTCTTTCCCACCCACTACCCGGCCGGCTTCCAGGT  812
                                                                                      
Sbjct  546  --------------------------------------------------------------------------  545

Query  813  GTACTGTGACATGCGCACGGACGGCGGCGGCTGGACGGTGTTTCAGCGCCGGGAGGACGGCTCCGTGAACTTCT  886
                                                |||.||||||||||||||.||.|||||.||||||||.|
Sbjct  546  ------------------------------------GGTATTTCAGCGCCGGGAAGATGGCTCTGTGAACTTTT  583

Query  887  TCCGGGGCTGGGATGCGTACCGAGACGGCTTTGGCAGGCTCACCGGGGAGCACTGGCTAGGGCTCAAGAGGATC  960
            ||||.||.|||||.||||||||.||.|||||.||||.||||||.||.|||||||||||.|||||||||.||||.
Sbjct  584  TCCGAGGTTGGGAGGCGTACCGGGAGGGCTTCGGCAAGCTCACAGGAGAGCACTGGCTGGGGCTCAAGCGGATT  657

Query  961  CACGCCCTGACCACACAGGCTGCCTACGAGCTGCACGTGGACCTGGAGGACTTTGAGAATGGCACGGCCTATGC  1034
            |||||||||||||||||.||.||.||||||||.|||||||||||.||.||||||||.||.|||||.||||||||
Sbjct  658  CACGCCCTGACCACACAAGCAGCATACGAGCTTCACGTGGACCTAGAAGACTTTGACAACGGCACCGCCTATGC  731

Query 1035  CCGCTACGGGAGCTTCGGCGTGGGCTTGTTCTCCGTGGACCCTGAGGAAGACGGGTACCCGCTCACCGTGGCTG  1108
            ||.|||||||||.||.||.||||||||||||||.||||||||.|||||.||.||||||||.|||||.|||||||
Sbjct  732  CCACTACGGGAGTTTTGGTGTGGGCTTGTTCTCTGTGGACCCCGAGGAGGATGGGTACCCACTCACGGTGGCTG  805

Query 1109  ACTATTCCGGCACTGCAGGCGACTCCCTCCTGAAGCACAGCGGCATGAGGTTCACCACCAAGGACCGTGACAGC  1182
            ||||.||||||||.|||||.||||||||||||||||||||.|||||||||||.||||||||||||||.||||||
Sbjct  806  ACTACTCCGGCACCGCAGGTGACTCCCTCCTGAAGCACAGTGGCATGAGGTTTACCACCAAGGACCGGGACAGC  879

Query 1183  GACCATTCAGAGAACAACTGTGCCGCCTTCTACCGCGGTGCCTGGTGGTACCGCAACTGCCACACGTCCAACCT  1256
            |||||.||.||||||||||||||||||||||||||.||.||||||||||||||||||||.|||||.||||||||
Sbjct  880  GACCACTCGGAGAACAACTGTGCCGCCTTCTACCGAGGAGCCTGGTGGTACCGCAACTGTCACACATCCAACCT  953

Query 1257  CAATGGGCAGTACCTGCGCGGTGCGCACGCCTCCTATGCCGACGGCGTGGAGTGGTCCTCCTGGACCGGCTGGC  1330
            ||||||.|||||||||||.|||||.|||||||||||.||.||||||||.|||||||||||.|||||.||.||||
Sbjct  954  CAATGGCCAGTACCTGCGTGGTGCACACGCCTCCTACGCAGACGGCGTCGAGTGGTCCTCTTGGACGGGATGGC  1027

Query 1331  AGTACTCACTCAAGTTCTCTGAGATGAAGATCCGGCCGGTCCGGGAGGACCGC  1383
            ||||.||||||||||||||.|||||||||||||||||||||||.|||||||||
Sbjct 1028  AGTATTCACTCAAGTTCTCGGAGATGAAGATCCGGCCGGTCCGTGAGGACCGC  1080