Nucleotide Global Alignment

Description

Query:
TRCN0000479053
Subject:
XM_011540366.2
Aligned Length:
2213
Identities:
1930
Gaps:
262

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATGGCAGCTTCACATTCCGGATATCTTTATGTTGGGGAAAATGTTTCAAAGGTACAAAACTCAAAACATGAACA  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  ACAATATATATTACCAATCTTCAAACCTGGTTTGCCTAGAACTGGAATACAGTTGCCTGCGACATATTTTAGAA  148

Query    1  --------------------ATGG--AACTTGAAAATG-------ATTATTGCTTGAATGATTACAACAT----  41
                                ||||  ||| .||||| |       |||    |||.||||||.|.|||||    
Sbjct  149  GAACTAGAAAAGTCAAAGTAATGGATAAC-AGAAAA-GAGCCTCCATT----CTTCAATGATGATAACATGGGA  216

Query   42  ---------TTCAGA---------------AGGGTGGA------CCTTGAAGC--TA----------GTTTTG-  72
                     |.||||               |...||||      |.|||||.|  ||          |||||| 
Sbjct  217  CCATTTTACTACAGACTTCATTTCTGTGATACCATGGAGCTCTTCATTGAAACATTAACTGGAACATGTTTTGA  290

Query   73  GCTATGCGTGGCGGACCTAT------------------------AAATACTAGAAG------AGTTCCTACAGA  116
            |||..|.||..|  ||||.|                        |||.|.|.||||      ||||||||||||
Sbjct  291  GCTGAGAGTTTC--ACCTTTTGAAACTGTTATTTCTGTGAAAGCAAAAATTCGAAGATTGGAAGTTCCTACAGA  362

Query  117  CGATCCACTTAGGACGATGGCAGAGTACTTGGATTCCAGTCGAGTTGAGGTCTGGGAGAAGACCTCCTGCAGCA  190
            ||||||||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  363  CGATCCACTTAGGAAGATGGCAGAGTACTTGGATTCCAGTCGAGTTGAGGTCTGGGAGAAGACCTCCTGCAGCA  436

Query  191  AACAAGTTACATTTTTGGTATACCAAGAAGGAGATCAATTGAATTTCTTTCCTGCAGTAGATAGGGGAGATGGC  264
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  437  AACAAGTTACATTTTTGGTATACCAAGAAGGAGATCAATTGAATTTCTTTCCTGCAGTAGATAGGGGAGATGGC  510

Query  265  ACTTTAACACCGTTATCTGACTCTTCAAAGAAAATAGATTTTCATTTGCATGTCCTACGGAGAAAAGGAGAACA  338
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  511  ACTTTAACACCGTTATCTGACTCTTCAAAGAAAATAGATTTTCATTTGCATGTCCTACGGAGAAAAGGAGAACA  584

Query  339  TCGTATGAGTGGTGGTTCTATGTATAATTCAGATACAGATGAGGATGAAGAAACTGAGCCTTCTTCTTCTGGGC  412
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  585  TCGTATGAGTGGTGGTTCTATGTATAATTCAGATACAGATGAGGATGAAGAAACTGAGCCTTCTTCTTCTGGGC  658

Query  413  AACAGATAATTGAAAATTCAATAACTATGAATAAGATGAAGCTGCTGAAGGCTAAGATGAAGAACATGAATCTC  486
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  659  AACAGATAATTGAAAATTCAATAACTATGAATAAGATGAAGCTGCTGAAGGCTAAGATGAAGAACATGAATCTC  732

Query  487  AGCAAAAAGCCTAAGAAAGCTGTCAAGATAAAACCTCACCCACCTGTAGCTCCTCGACCTTCTAGTGGTTCCAC  560
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  733  AGCAAAAAGCCTAAGAAAGCTGTCAAGATAAAACCTCACCCACCTGTAGCTCCTCGACCTTCTAGTGGTTCCAC  806

Query  561  TGCACCATCTCGCCACCGATTGTTAAGGGTCCTCCCCAACATTGGTCAATCTTGTTCACCTGCTTTTGGGAATG  634
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  807  TGCACCATCTCGCCACCGATTGTTAAGGGTCCTCCCCAACATTGGTCAATCTTGTTCACCTGCTTTTGGGAATG  880

Query  635  CATATCCGCCCGAAATCTCCAGGAATGGAATTTCAAGTTTGGCAACTCAACTCTCTGCTGAGAGATACATATCT  708
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  881  CATATCCGCCCGAAATCTCCAGGAATGGAATTTCAAGTTTGGCAACTCAACTCTCTGCTGAGAGATACATATCT  954

Query  709  TCTATCACTGGTGAATTTCTTAAGGAAGATAATAGCTGGGAGAATAACACACTGTCTCACTTCAGTAGCAACGT  782
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  955  TCTATCACTGGTGAATTTCTTAAGGAAGATAATAGCTGGGAGAATAACACACTGTCTCACTTCAGTAGCAACGT  1028

Query  783  CAAACTACCTCCTCAGATACCCCATTTGGAGTTGGGAAATGACCAGGAGCTTGCTGACTCTGTTCTCCATCTTG  856
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1029  CAAACTACCTCCTCAGATACCCCATTTGGAGTTGGGAAATGACCAGGAGCTTGCTGACTCTGTTCTCCATCTTG  1102

Query  857  GATCATCCCTGCCTAGGCAAACAAAACATTTTTTAGGAAACTTGCCATCTAGTAATGGGAACATTGTCTTACCT  930
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1103  GATCATCCCTGCCTAGGCAAACAAAACATTTTTTAGGAAACTTGCCATCTAGTAATGGGAACATTGTCTTACCT  1176

Query  931  TCAGAAGAATGTGTAACCGAACAATCACTTCTACCTAAAGTGGGCTCACTGGCTTCATTTGCAGAAGGAAATGC  1004
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1177  TCAGAAGAATGTGTAACCGAACAATCACTTCTACCTAAAGTGGGCTCACTGGCTTCATTTGCAGAAGGAAATGC  1250

Query 1005  TGATGAACAGAGCAGCGGCTTAGAAGGTGCGTGCAAAGTGAATCTGGAGTTGCTACTCACTAATGCTGACAAAG  1078
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1251  TGATGAACAGAGCAGCGGCTTAGAAGGTGCGTGCAAAGTGAATCTGGAGTTGCTACTCACTAATGCTGACAAAG  1324

Query 1079  GGTTGAAAGCTCCAGAGCAGCATCTCAAGCATGTTGCAGGAGTGCTGAATGGGGAATCAGTAGAGACTTCAGTT  1152
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1325  GGTTGAAAGCTCCAGAGCAGCATCTCAAGCATGTTGCAGGAGTGCTGAATGGGGAATCAGTAGAGACTTCAGTT  1398

Query 1153  CTTAACTACCGGGAATTAAGTCCTCACAAGAATAGACTCTTGTCACCTCTTCGCTGTTCTGCACCAATGTCGCT  1226
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1399  CTTAACTACCGGGAATTAAGTCCTCACAAGAATAGACTCTTGTCACCTCTTCGCTGTTCTGCACCAATGTCGCT  1472

Query 1227  ACATAATTCTCTGGTGAAACCAGAGAGACAGTCCAAATGTTTTGAGTTTGGGAAGCTACAGCCTTCTTCTTCTC  1300
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1473  ACATAATTCTCTGGTGAAACCAGAGAGACAGTCCAAATGTTTTGAGTTTGGGAAGCTACAGCCTTCTTCTTCTC  1546

Query 1301  AGTCACTGGATGTTCAAAACATAACTGATTCTTCTTTCTCTAGGACTACTTGCTTTCAAGGTGTTAAAGTTGAT  1374
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1547  AGTCACTGGATGTTCAAAACATAACTGATTCTTCTTTCTCTAGGACTACTTGCTTTCAAGGTGTTAAAGTTGAT  1620

Query 1375  TCGCTTGGGAAAAGATCTGATGTTATTTCCAAAGTTGAGGCTCGGGATATCACAGAAATGACTAACAAGGCTTC  1448
            ||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1621  TCACTTGGGAAAAGATCTGATGTTATTTCCAAAGTTGAGGCTCGGGATATCACAGAAATGACTAACAAGGCTTC  1694

Query 1449  CAAAGAGCCTGTTGGTTGTGTAAATAATATCAGTTTTCTTGCCTCACTGGCCGGGAGCACAAGCAGAAATAGAT  1522
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1695  CAAAGAGCCTGTTGGTTGTGTAAATAATATCAGTTTTCTTGCCTCACTGGCCGGGAGCACAAGCAGAAATAGAT  1768

Query 1523  TACAGAGCACACGTGGGGCAGGCAGGCTTCAGAACTCTGGAACTGGGCTGTCTACAAACCTCCAGCATTTTCAG  1596
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1769  TACAGAGCACACGTGGGGCAGGCAGGCTTCAGAACTCTGGAACTGGGCTGTCTACAAACCTCCAGCATTTTCAG  1842

Query 1597  GAAGAAAACTTTAGGAAAAGTTCTCCCCAGTTAGAACATACAGGAGTTTTTTTGTCTACCCATGGTGTTGGAAT  1670
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1843  GAAGAAAACTTTAGGAAAAGTTCTCCCCAGTTAGAACATACAGGAGTTTTTTTGTCTACCCATGGTGTTGGAAT  1916

Query 1671  GAATGGAAATAATGCAGCAGCAGGGAAAAGCGTAGGAGAATGTACTACTCATCACCTCCCACCTGTGAAAGCCC  1744
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1917  GAATGGAAATAATGCAGCAGCAGGGAAAAGCGTAGGAGAATGTACTACTCATCACCTCCCACCTGTGAAAGCCC  1990

Query 1745  CTCTTCAGACAAAGAAGAAAACAACAAATCATTGTTTTCTTTGTGGAAAGAAAACAGGACTGGCTAGTAGCTAC  1818
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1991  CTCTTCAGACAAAGAAGAAAACAACAAATCATTGTTTTCTTTGTGGAAAGAAAACAGGACTGGCTAGTAGCTAC  2064

Query 1819  GAATGCAGATGTGGAAACAACTTCTGTGCATCTCATCGTTATGCAGAAACTCATGGCTGTACCTATGATTACAA  1892
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2065  GAATGCAGATGTGGAAACAACTTCTGTGCATCTCATCGTTATGCAGAAACTCATGGCTGTACCTATGATTACAA  2138

Query 1893  GAGTGCAGGGAGGAGATACTTGCACGAGGCAAATCCTGTGGTTAATGCACCAAAGCTTCCAAAAATC  1959
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2139  GAGTGCAGGGAGGAGATACTTGCACGAGGCAAATCCTGTGGTTAATGCACCAAAGCTTCCAAAAATC  2205

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