Nucleotide Global Alignment
Description
- Query:
- TRCN0000479075
- Subject:
- XR_001755675.2
- Aligned Length:
- 5741
- Identities:
- 1125
- Gaps:
- 4609
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ACTTTCTCTTTGTCGGAGGAGCTCCTCTGTTTCCTGTGCAGTAGCTCCCGTTGCGGCGGCACCCGTGGCAGCCC 74
Query 1 -----------------ATGGCAGCGACCGATATAGCTCGCCAGGTGGGTGAAGGTTGCCGAACTGTCCCCCTG 57
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 TGGCGGACGCAGGAGCGATGGCAGCGACCGATATAGCTCGCCAGGTGGGTGAAGGTTGCCGAACTGTCCCCCTG 148
Query 58 GCTGGACATGTGGGGTTTGACAGCTTGCCTGACCAGCTGGTGAATAAGTCCGTCAGCCAGGGCTTCTGCTTCAA 131
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 GCTGGACATGTGGGGTTTGACAGCTTGCCTGACCAGCTGGTGAATAAGTCCGTCAGCCAGGGCTTCTGCTTCAA 222
Query 132 CATCCTGTGCGTGGGAGAGACAGGTTTGGGCAAGTCCACCCTCATGGACACCCTGTTCAACACCAAATTCGAAG 205
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 CATCCTGTGCGTGGGAGAGACAGGTTTGGGCAAGTCCACCCTCATGGACACCCTGTTCAACACCAAATTCGAAG 296
Query 206 GGGAGCCAGCCACCCACACACAGCCGGGTGTCCAGCTCCAGTCTAATACCTATGACCTCCAAGAGAGCAACGTG 279
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 GGGAGCCAGCCACCCACACACAGCCGGGTGTCCAGCTCCAGTCTAATACCTATGACCTCCAAGAGAGCAACGTG 370
Query 280 AGGCTAAAGCTCACGATCGTTAGCACAGTTGGCTTTGGGGACCAGATCAACAAAGAGGACAGCTACAAGCCTAT 353
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 AGGCTAAAGCTCACGATCGTTAGCACAGTTGGCTTTGGGGACCAGATCAACAAAGAGGACAGCTACAAGCCTAT 444
Query 354 CGTGGAATTCATCGATGCACAATTCGAGGCCTACCTGCAGGAAGAGCTAAAGATCCGAAGAGTGCTACACACCT 427
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 CGTGGAATTCATCGATGCACAATTCGAGGCCTACCTGCAGGAAGAGCTAAAGATCCGAAGAGTGCTACACACCT 518
Query 428 ACCATGACTCCCGAATCCATGTCTGCTTGTATTTCATTGCCCCCACGGGTCATTCCCTGAAGTCTCTGGACCTA 501
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 ACCATGACTCCCGAATCCATGTCTGCTTGTATTTCATTGCCCCCACGGGTCATTCCCTGAAGTCTCTGGACCTA 592
Query 502 GTGACTATGAAGAAGCTGGACAGTAAGGTGAACATCATCCCCATCATTGCCAAAGCAGATGCCATTTCGAAGAG 575
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 GTGACTATGAAGAAGCTGGACAGTAAGGTGAACATCATCCCCATCATTGCCAAAGCAGATGCCATTTCGAAGAG 666
Query 576 TGAGCTAACAAAGTTCAAAATCAAAATCACCAGCGAGCTTGTCAGCAACGGAGTCCAGATCTATCAGTTTCCTA 649
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 TGAGCTAACAAAGTTCAAAATCAAAATCACCAGCGAGCTTGTCAGCAACGGAGTCCAGATCTATCAGTTTCCTA 740
Query 650 CAGATGATGAGTCGGTGGCAGAGATCAATGGAACCATGAACGCCCACCTGCCGTTTGCTGTCATTGGCAGCACA 723
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 CAGATGATGAGTCGGTGGCAGAGATCAATGGAACCATGAACGCCCACCTGCCGTTTGCTGTCATTGGCAGCACA 814
Query 724 GAAGAACTGAAGATAGGCAACAAGATGATGAGGGCGCGGCAGTATCCTTGGGGCACTGTGCAGGTTGAAAACGA 797
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 GAAGAACTGAAGATAGGCAACAAGATGATGAGGGCGCGGCAGTATCCTTGGGGCACTGTGCAG----------- 877
Query 798 GGCCCACTGCGACTTTGTGAAGCTGCGGGAGATGCTGATTCGGGTCAACATGGAGGATCTGCGGGAGCAGACCC 871
Sbjct 878 -------------------------------------------------------------------------- 877
Query 872 ACACCCGGCACTATGAGCTGTATCGCCGCTGTAAGCTGGAGGAGATGGGCTTCAAGGACACCGACCCTGACAGC 945
Sbjct 878 -------------------------------------------------------------------------- 877
Query 946 AAACCCTTCAGTTTACAGGAGACATATGAGGCCAAAAGGAACGAGTTCCTAGGGGAACTCCAGAAAAAAGAAGA 1019
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 878 ----------GTTTACAGGAGACATATGAGGCCAAAAGGAACGAGTTCCTAGGGGAACTCCAGAAAAAAGAAGA 941
Query 1020 GGAGATGAGACAGATGTTCGTCCAGCGAGTCAAAGAGAAAGAAGCGGAGCTCAAAGAGGCAGAGAAAGAGCTGC 1093
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 942 GGAGATGAGACAGATGTTCGTCCAGCGAGTCAAAGAGAAAGAAGCGGAGCTCAAAGAGGCAGAGAAAGAGCTGC 1015
Query 1094 ACGAGAAGTTTGACCGTCTGAAGAAACTGCACCAGGACGAGAAGAAGAAACTGGAGGATAAGAAGAAATCCCTG 1167
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1016 ACGAGAAGTTTGACCGTCTGAAGAAACTGCACCAGGACGAGAAGAAGAAACTGGAGGATAAGAAGAAATCCCTG 1089
Query 1168 GATGATGAAGTGAATGCTTTCAAGCAAAGAAAGACGGCGGCTGAGCTGCTCCAGTCCCAGGGCTCCCAGGCTGG 1241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1090 GATGATGAAGTGAATGCTTTCAAGCAAAGAAAGACGGCGGCTGAGCTGCTCCAGTCCCAGGGCTCCCAGGCTGG 1163
Query 1242 AGGCTCACAGACTCTGAAGAGAGACAAAGAGAAGAAAAATAATCCATGGCTGTGTACTGAA------------- 1302
||||||||||||||||||||||||||||||||||||||||.|.|..| |||||.|.|||.|
Sbjct 1164 AGGCTCACAGACTCTGAAGAGAGACAAAGAGAAGAAAAATTAACTCT-GCTGTTTGCTGCATGCTGCATGAGAC 1236
Query 1303 -------------------------------------------------------------------------- 1302
Sbjct 1237 CCAGGGTCCTGTTTGGGCTTCCTGTAGACACCCTTTTCCTGCGCAACAGAGCTGGGCCTCCCTTTCTCTAATTT 1310
Query 1303 -------------------------------------------------------------------------- 1302
Sbjct 1311 CCCCCTTAACATGCCTGGGGGGCATACAATCCAACCCGCGCCCTCTCCTCTCTTCCTGCCAAGGTTTATAGAAA 1384
Query 1303 -------------------------------------------------------------------------- 1302
Sbjct 1385 CCTGAGAATCTGAGGGTGATGTCTGGCCGCTGGTCAAGAAGCCAACAGTCATGTGGCTCGCAGATGCATCCTGC 1458
Query 1303 -------------------------------------------------------------------------- 1302
Sbjct 1459 ATCCCAGTCCCCCTCCCAGCACCCCCAGCCATCCCCCCTGTCTTCCCCCACATCTTTGCCAGAGGTGTGACATG 1532
Query 1303 -------------------------------------------------------------------------- 1302
Sbjct 1533 GTCAGGGGGCCCATCTGCTACTCTTTCCCACCAGCTCCCCTGTTCCAGTTCTGGTTGCTGTTAGTTTCCCTGAG 1606
Query 1303 -------------------------------------------------------------------------- 1302
Sbjct 1607 GTATTTGCAACCACCATGGCTGGGTAACCACCGATCAGCACAGCTGTCCCCTTGGTCTCCTGTATCCCAGTCAC 1680
Query 1303 -------------------------------------------------------------------------- 1302
Sbjct 1681 TAGTCCTCCCTGGTCCACCCCACCCTCATCCTCAGGAGCCACAGCCATTTCTTAGAGGGTTTCAAAAGGACAGC 1754
Query 1303 -------------------------------------------------------------------------- 1302
Sbjct 1755 CTTTGGCGCCTTTTCCTTCTAACCTTTGAGTCCAGCCCTTTCCAGTTTTCATTCACTCGAAGTAACTGCACTCA 1828
Query 1303 -------------------------------------------------------------------------- 1302
Sbjct 1829 AGCTGTGCTCAAAATCGGCAACGCATTTATTTACACCAAGCCCTTCCCATAAAACACAACTGCTGAAGAAAATA 1902
Query 1303 -------------------------------------------------------------------------- 1302
Sbjct 1903 GCAGACGTTTCCCCTCTCTCTAACTCTGGGTATCCCACAGATGCAAAAGGGAGAATAAACCTGAATATTATTAC 1976
Query 1303 -------------------------------------------------------------------------- 1302
Sbjct 1977 CAGCCTAGAGTCTTGAATGATAGCCTTACCGAATTCTTCTTGTGAGGTATTTCAGCATCTCGGGGGGTAATTTC 2050
Query 1303 -------------------------------------------------------------------------- 1302
Sbjct 2051 CGGAAGGGCTCCATACTGTCCCAATAAGGTGAGGCCAGTAGCAGGAATAATAAATCCCACTTTGTAGGCTGGAA 2124
Query 1303 -------------------------------------------------------------------------- 1302
Sbjct 2125 AACTGAGCTGTCAAAAGAATCAAGTGTTTGGGGGTTTGCTCTGATGAGTCTTCTAGTTCATTTGGTGAATGTCA 2198
Query 1303 -------------------------------------------------------------------------- 1302
Sbjct 2199 TGATGATTTTTAACATGCATTTTGCATGCATCCCCCAATAAGAAGAGATGAGACTCGGCCGGAGAGAAGAAAAG 2272
Query 1303 -------------------------------------------------------------------------- 1302
Sbjct 2273 GCCCTTAACTTTCTTTCCAATTTAAGGAGTTGAGAGTTTAAAAATATTCCAGCCCTAAGTTTTTATCATGGGTC 2346
Query 1303 -------------------------------------------------------------------------- 1302
Sbjct 2347 CCATCTGATAGTGGCTTTGGGAACCTCTGTGAAGTAGAGAGCCCTCCCTTGTCAGGGTTATGAGGCACAGTGGC 2420
Query 1303 -------------------------------------------------------------------------- 1302
Sbjct 2421 CTTTGGTGTTTGGCCAGTGACAGTGTGAGAGATGGAGTTGACCTGGCAATGATCTGTGGCTAACATGCCGTCTC 2494
Query 1303 -------------------------------------------------------------------------- 1302
Sbjct 2495 TCTGCCCTTCCTTTGCAGTAATCCATGGCTGTGTACTGAATAGTATTCCCCGCTACAGCTGGACTGGACTCCAT 2568
Query 1303 -------------------------------------------------------------------------- 1302
Sbjct 2569 TTAGCCTTTTAAGCCGAGGTTCCTATTTTAACTGACAGCTTTCCTTTGGGGTGCCAGGCAGCGAGGCCCCCCAC 2642
Query 1303 -------------------------------------------------------------------------- 1302
Sbjct 2643 CCCTATCCTGCCATGTACTTCAAGCTCACTTCTTCTTTTTGAGTTCCGCAACTTGCTCCTGCCTCCCAGCCCCA 2716
Query 1303 -------------------------------------------------------------------------- 1302
Sbjct 2717 CTGGCACTGACCATGACCACCTACTTCTATTTTTTTTTTAGAGTTTCTTTTTTTGATCACTTACTTTCAAAGCA 2790
Query 1303 -------------------------------------------------------------------------- 1302
Sbjct 2791 CACAGTCAAACAAGGTTATGCCAAATTTCCAGGCCTTTTTGAAGTATTGAGAAGGGGAAGGGGATTTCTCACTT 2864
Query 1303 -------------------------------------------------------------------------- 1302
Sbjct 2865 CAATTATAGATCATAATAGGAAGCAAAAAGAAAAAAATGAAAAGCAAACATATGCACGCACTTTTCTTGTTGAC 2938
Query 1303 -------------------------------------------------------------------------- 1302
Sbjct 2939 AAAGCAAGAATATAGGTTTGCTGTGTAGGTTTGGTGCTCTATTGATTGGTGAGTGACCAGAGCAAGTATGAAGG 3012
Query 1303 -------------------------------------------------------------------------- 1302
Sbjct 3013 TGATGCTGCCAAAGCACAAGCCAGTTTCTTGGGAAAATTCAAGTTACAGTGGAGTATTTTTTTGAAGACCATAT 3086
Query 1303 -------------------------------------------------------------------------- 1302
Sbjct 3087 GCTTGGAGGTAGAAACAAACCAACGACCAAAAAAAAAAAAAAAAAAATCTGCTCAGATACTCAGCCAGTAGCTC 3160
Query 1303 -------------------------------------------------------------------------- 1302
Sbjct 3161 AGAGAGATGCTGAGTTAGGCCTGTCAGGTCTCCTTGGGAAAGGCTTCATATTTGCAACTTTGATGATTCTATGT 3234
Query 1303 -------------------------------------------------------------------------- 1302
Sbjct 3235 CCAGCTTCAGAGCTGCTTTCCCAGAAATTCACGCTTAAACAACCAACCGGTAACCACCACTTCCCCACACCGCC 3308
Query 1303 -------------------------------------------------------------------------- 1302
Sbjct 3309 GCCCGGTAATTATTTGCATTACAAACCGGAGGCGCCCTCATTTGCATTTGTGTACAGATTAACTAGTTAAGGCT 3382
Query 1303 -------------------------------------------------------------------------- 1302
Sbjct 3383 TGAGAAGCTCTGAATAATTCAAAAGTATTAGACCCACACAGCCTTGGAGAGACCTTCAGAAACTAAGGAGGAGT 3456
Query 1303 -------------------------------------------------------------------------- 1302
Sbjct 3457 TTTATATTAAGGGAGACATTTTAGTCAGTAAGACGATATAACCTACTTACTCCGTAAGGGGAAATGAAGGCCCA 3530
Query 1303 -------------------------------------------------------------------------- 1302
Sbjct 3531 GAGAAGGGAAGGGACTTGACCGAGGTCCCACTTCTGTTTCGAGGCAGAAGCCAGACTAATTTTCATGCCTCCTG 3604
Query 1303 -------------------------------------------------------------------------- 1302
Sbjct 3605 ACTCCCAATCAGTTTCACAAAGGGATTCAATCTGTTTATATACGTTACATTCCTGGATACGAGGTCTTTTGATG 3678
Query 1303 -------------------------------------------------------------------------- 1302
Sbjct 3679 TTCAGAGTAACTGACTAGTTAGTATTAGAAGACCCTCGAGGTTTTTTTCCACAGAAAAACATCTGAAGATGGAT 3752
Query 1303 -------------------------------------------------------------------------- 1302
Sbjct 3753 TGGGTGAGGGCTGGCAAAACGAAGGCATGCCGGGCCAGCTCCTTAACCCAATGACCCAGTGATGCTGCAAGGCT 3826
Query 1303 -------------------------------------------------------------------------- 1302
Sbjct 3827 GGAACGGGGTCCAGGAGACTGTGTGTAACAGGTGCCCTAGGTGACCCTTATAATCAGGGAAGTTTGGTGAACAA 3900
Query 1303 -------------------------------------------------------------------------- 1302
Sbjct 3901 AAATCGAACCCATGAGTGAACATAAATTAAAAAGTTGATCAACCTATTAAAATGTGTATTTCATTGGGTAGCTT 3974
Query 1303 -------------------------------------------------------------------------- 1302
Sbjct 3975 TTCTCACTGTAGACAGATTTTTTCCTTCTTCAATGAAAAGGCTTTTAAATTAGTACAACTGTTACTATTTAAAA 4048
Query 1303 -------------------------------------------------------------------------- 1302
Sbjct 4049 AAAAAATACCCTAAGTACTCTGTTTACTTCTGGTGAAACAAAACCAGTCATTAGAAATGGTCTGTGCTTTTATT 4122
Query 1303 -------------------------------------------------------------------------- 1302
Sbjct 4123 TTCCCAGACTGGAGTGGCTTTTCTGAAACACACACACACACACACACACACACACACACACACACACACACACA 4196
Query 1303 -------------------------------------------------------------------------- 1302
Sbjct 4197 CACGTACACACATCCCTCACTTCTCTTAAGCCAAGAAGTTTGCTTTCCCTAGCTGCAGTGTAGATGGCTCTTGT 4270
Query 1303 -------------------------------------------------------------------------- 1302
Sbjct 4271 TTTTGTTTTTTTGTTTTAATCATTTGGCATTCACATGTGGCTGTTAATATGTGCTTGTTTTTAATTAAAACAAG 4344
Query 1303 -------------------------------------------------------------------------- 1302
Sbjct 4345 AAGCTTTAAACTGGTGTGTGGTGTTCTTAAAACCTTCTCAGCAGATTTCCCCGTGGTGATGGCCCAGCAATGAC 4418
Query 1303 -------------------------------------------------------------------------- 1302
Sbjct 4419 CCCCATTTCTAACCTGTCTTCTCACACTACAATCTGTGCTACCTCAATATTGCCCATTCCCCTCCCCCTGTCTT 4492
Query 1303 -------------------------------------------------------------------------- 1302
Sbjct 4493 ACTTTGAATGTCCTCTTTCTTTGGCTAATTTCATGTTTTCTTTCTCTTTCTCTCTCCTTTCCAGCTTTTTTTAA 4566
Query 1303 -------------------------------------------------------------------------- 1302
Sbjct 4567 TCTTGTCTTCAGCAGCTGCACTAAGTCTAAAGGAGAAGACTGCCATTATAGAAGAGTTAGGGTTCCATATTGTC 4640
Query 1303 -------------------------------------------------------------------------- 1302
Sbjct 4641 TCAAATCAGAAATCAACCAATTTCCTCTCCCCTCAAACTGCAAGCACACACACATACACCACACCACTCAACAA 4714
Query 1303 -------------------------------------------------------------------------- 1302
Sbjct 4715 GTGTTCATGTGTCCCTGTGTCCAGGCAAGAAGCTCTCTTCCTGACTCACATGGTATTTTAAATGGAAGTGTCTT 4788
Query 1303 -------------------------------------------------------------------------- 1302
Sbjct 4789 GTCCTAACTAACAAGGCAGGAAAAGAACCATCAGAGCTGGAAAATGGACGAAATGTAACCTCAGAGAAACAACT 4862
Query 1303 -------------------------------------------------------------------------- 1302
Sbjct 4863 ACAGGACCACTCACCCAAGTGTAAGTGACTGGGGCAGGACACCTCAGCTGTGGGTATGAAAGTACTGTTCTGTT 4936
Query 1303 -------------------------------------------------------------------------- 1302
Sbjct 4937 CACAAGGTTTTGTTTGAGTTTTATGTTTTTCTTTTAAACATTTCTCTGGTTCGATGGGTTGACTGTCTACAGCC 5010
Query 1303 -------------------------------------------------------------------------- 1302
Sbjct 5011 ACTGTTAAACATTTCTGAATATGCAAGAGAAAGTCAAGTGACATTTGTATCTTCTTCAGCATTCGCAGACCTTC 5084
Query 1303 -------------------------------------------------------------------------- 1302
Sbjct 5085 TATAGATTCCAGCAAAGGGGGAAAATGTATCCACTATCTAACACTTAGGTAGAGAAGGGAGGGGGTTTAAGCTT 5158
Query 1303 -------------------------------------------------------------------------- 1302
Sbjct 5159 AGTGAGGGCAAAATTACTCCATTCCACCTTCCGAGACCAGTTAGGGTTTTGAGAGAGGTTTCTGCTCAACCTGG 5232
Query 1303 -------------------------------------------------------------------------- 1302
Sbjct 5233 GATCTGGAGGGAGAGCTTTGATGTTGGTAAATCTGCCTTGAATTCATTGGTTTAACTTGCATCAAAATACCATG 5306
Query 1303 -------------------------------------------------------------------------- 1302
Sbjct 5307 TGAGTGTGCTCATTCTCATATATCCCCTACCACCATCACCACCATTCTGCTGTTCAGTGTCTCTTGAGAGAGCC 5380
Query 1303 -------------------------------------------------------------------------- 1302
Sbjct 5381 TCTTTGCATGTTTTCCAGAATCTGTGTGTGTTTTTCCTTTCTTCTCCTTTGTTCTTTTTGCTCAAAGGTGTGAC 5454
Query 1303 -------------------------------------------------------------------------- 1302
Sbjct 5455 CAGTCATTGCCCCTCTGGGGCTTTCATTCTCCAGGAGAAACATCCCAGAACCAGCACTGTTTAGCCTGATACCT 5528
Query 1303 ------------------------------------------- 1302
Sbjct 5529 TTCTAATGTCCATGTCAATTTTCAATAAAATTCAAAGAAATGC 5571
