Nucleotide Global Alignment
Description
- Query:
- TRCN0000479075
- Subject:
- XR_001755676.2
- Aligned Length:
- 4434
- Identities:
- 1133
- Gaps:
- 3301
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ACTTTCTCTTTGTCGGAGGAGCTCCTCTGTTTCCTGTGCAGTAGCTCCCGTTGCGGCGGCACCCGTGGCAGCCC 74
Query 1 -----------------ATGGCAGCGACCGATATAGCTCGCCAGGTGGGTGAAGGTTGCCGAACTGTCCCCCTG 57
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 TGGCGGACGCAGGAGCGATGGCAGCGACCGATATAGCTCGCCAGGTGGGTGAAGGTTGCCGAACTGTCCCCCTG 148
Query 58 GCTGGACATGTGGGGTTTGACAGCTTGCCTGACCAGCTGGTGAATAAGTCCGTCAGCCAGGGCTTCTGCTTCAA 131
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 GCTGGACATGTGGGGTTTGACAGCTTGCCTGACCAGCTGGTGAATAAGTCCGTCAGCCAGGGCTTCTGCTTCAA 222
Query 132 CATCCTGTGCGTGGGAGAGACAGGTTTGGGCAAGTCCACCCTCATGGACACCCTGTTCAACACCAAATTCGAAG 205
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 CATCCTGTGCGTGGGAGAGACAGGTTTGGGCAAGTCCACCCTCATGGACACCCTGTTCAACACCAAATTCGAAG 296
Query 206 GGGAGCCAGCCACCCACACACAGCCGGGTGTCCAGCTCCAGTCTAATACCTATGACCTCCAAGAGAGCAACGTG 279
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 GGGAGCCAGCCACCCACACACAGCCGGGTGTCCAGCTCCAGTCTAATACCTATGACCTCCAAGAGAGCAACGTG 370
Query 280 AGGCTAAAGCTCACGATCGTTAGCACAGTTGGCTTTGGGGACCAGATCAACAAAGAGGACAGCTACAAGCCTAT 353
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 AGGCTAAAGCTCACGATCGTTAGCACAGTTGGCTTTGGGGACCAGATCAACAAAGAGGACAGCTACAAGCCTAT 444
Query 354 CGTGGAATTCATCGATGCACAATTCGAGGCCTACCTGCAGGAAGAGCTAAAGATCCGAAGAGTGCTACACACCT 427
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 CGTGGAATTCATCGATGCACAATTCGAGGCCTACCTGCAGGAAGAGCTAAAGATCCGAAGAGTGCTACACACCT 518
Query 428 ACCATGACTCCCGAATCCATGTCTGCTTGTATTTCATTGCCCCCACGGGTCATTCCCTGAAGTCTCTGGACCTA 501
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 ACCATGACTCCCGAATCCATGTCTGCTTGTATTTCATTGCCCCCACGGGTCATTCCCTGAAGTCTCTGGACCTA 592
Query 502 GTGACTATGAAGAAGCTGGACAGTAAGGTGAACATCATCCCCATCATTGCCAAAGCAGATGCCATTTCGAAGAG 575
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 GTGACTATGAAGAAGCTGGACAGTAAGGTGAACATCATCCCCATCATTGCCAAAGCAGATGCCATTTCGAAGAG 666
Query 576 TGAGCTAACAAAGTTCAAAATCAAAATCACCAGCGAGCTTGTCAGCAACGGAGTCCAGATCTATCAGTTTCCTA 649
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 TGAGCTAACAAAGTTCAAAATCAAAATCACCAGCGAGCTTGTCAGCAACGGAGTCCAGATCTATCAGTTTCCTA 740
Query 650 CAGATGATGAGTCGGTGGCAGAGATCAATGGAACCATGAACGCCCACCTGCCGTTTGCTGTCATTGGCAGCACA 723
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 CAGATGATGAGTCGGTGGCAGAGATCAATGGAACCATGAACGCCCACCTGCCGTTTGCTGTCATTGGCAGCACA 814
Query 724 GAAGAACTGAAGATAGGCAACAAGATGATGAGGGCGCGGCAGTATCCTTGGGGCACTGTGCAGGTTGAAAACGA 797
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 GAAGAACTGAAGATAGGCAACAAGATGATGAGGGCGCGGCAGTATCCTTGGGGCACTGTGCAG----------- 877
Query 798 GGCCCACTGCGACTTTGTGAAGCTGCGGGAGATGCTGATTCGGGTCAACATGGAGGATCTGCGGGAGCAGACCC 871
Sbjct 878 -------------------------------------------------------------------------- 877
Query 872 ACACCCGGCACTATGAGCTGTATCGCCGCTGTAAGCTGGAGGAGATGGGCTTCAAGGACACCGACCCTGACAGC 945
Sbjct 878 -------------------------------------------------------------------------- 877
Query 946 AAACCCTTCAGTTTACAGGAGACATATGAGGCCAAAAGGAACGAGTTCCTAGGGGAACTCCAGAAAAAAGAAGA 1019
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 878 ----------GTTTACAGGAGACATATGAGGCCAAAAGGAACGAGTTCCTAGGGGAACTCCAGAAAAAAGAAGA 941
Query 1020 GGAGATGAGACAGATGTTCGTCCAGCGAGTCAAAGAGAAAGAAGCGGAGCTCAAAGAGGCAGAGAAAGAGCTGC 1093
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 942 GGAGATGAGACAGATGTTCGTCCAGCGAGTCAAAGAGAAAGAAGCGGAGCTCAAAGAGGCAGAGAAAGAGCTGC 1015
Query 1094 ACGAGAAGTTTGACCGTCTGAAGAAACTGCACCAGGACGAGAAGAAGAAACTGGAGGATAAGAAGAAATCCCTG 1167
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1016 ACGAGAAGTTTGACCGTCTGAAGAAACTGCACCAGGACGAGAAGAAGAAACTGGAGGATAAGAAGAAATCCCTG 1089
Query 1168 GATGATGAAGTGAATGCTTTCAAGCAAAGAAAGACGGCGGCTGAGCTGCTCCAGTCCCAGGGCTCCCAGGCTGG 1241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1090 GATGATGAAGTGAATGCTTTCAAGCAAAGAAAGACGGCGGCTGAGCTGCTCCAGTCCCAGGGCTCCCAGGCTGG 1163
Query 1242 AGGCTCACAGACTCTGAAGAGAGACAAAGAGAAGAAAAATAATCCATGGCTGTGTACTGAA------------- 1302
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1164 AGGCTCACAGACTCTGAAGAGAGACAAAGAGAAGAAAAATAATCCATGGCTGTGTACTGAATAGTATTCCCCGC 1237
Query 1303 -------------------------------------------------------------------------- 1302
Sbjct 1238 TACAGCTGGACTGGACTCCATTTAGCCTTTTAAGCCGAGGTTCCTATTTTAACTGACAGCTTTCCTTTGGGGTG 1311
Query 1303 -------------------------------------------------------------------------- 1302
Sbjct 1312 CCAGGCAGCGAGGCCCCCCACCCCTATCCTGCCATGTACTTCAAGCTCACTTCTTCTTTTTGAGTTCCGCAACT 1385
Query 1303 -------------------------------------------------------------------------- 1302
Sbjct 1386 TGCTCCTGCCTCCCAGCCCCACTGGCACTGACCATGACCACCTACTTCTATTTTTTTTTTAGAGTTTCTTTTTT 1459
Query 1303 -------------------------------------------------------------------------- 1302
Sbjct 1460 TGATCACTTACTTTCAAAGCACACAGTCAAACAAGGTTATGCCAAATTTCCAGGCCTTTTTGAAGTATTGAGAA 1533
Query 1303 -------------------------------------------------------------------------- 1302
Sbjct 1534 GGGGAAGGGGATTTCTCACTTCAATTATAGATCATAATAGGAAGCAAAAAGAAAAAAATGAAAAGCAAACATAT 1607
Query 1303 -------------------------------------------------------------------------- 1302
Sbjct 1608 GCACGCACTTTTCTTGTTGACAAAGCAAGAATATAGGTTTGCTGTGTAGGTTTGGTGCTCTATTGATTGGTGAG 1681
Query 1303 -------------------------------------------------------------------------- 1302
Sbjct 1682 TGACCAGAGCAAGTATGAAGGTGATGCTGCCAAAGCACAAGCCAGTTTCTTGGGAAAATTCAAGTTACAGTGGA 1755
Query 1303 -------------------------------------------------------------------------- 1302
Sbjct 1756 GTATTTTTTTGAAGACCATATGCTTGGAGGTAGAAACAAACCAACGACCAAAAAAAAAAAAAAAAAAATCTGCT 1829
Query 1303 -------------------------------------------------------------------------- 1302
Sbjct 1830 CAGATACTCAGCCAGTAGCTCAGAGAGATGCTGAGTTAGGCCTGTCAGGTCTCCTTGGGAAAGGCTTCATATTT 1903
Query 1303 -------------------------------------------------------------------------- 1302
Sbjct 1904 GCAACTTTGATGATTCTATGTCCAGCTTCAGAGCTGCTTTCCCAGAAATTCACGCTTAAACAACCAACCGGTAA 1977
Query 1303 -------------------------------------------------------------------------- 1302
Sbjct 1978 CCACCACTTCCCCACACCGCCGCCCGGTAATTATTTGCATTACAAACCGGAGGCGCCCTCATTTGCATTTGTGT 2051
Query 1303 -------------------------------------------------------------------------- 1302
Sbjct 2052 ACAGATTAACTAGTTAAGGCTTGAGAAGCTCTGAATAATTCAAAAGTATTAGACCCACACAGCCTTGGAGAGAC 2125
Query 1303 -------------------------------------------------------------------------- 1302
Sbjct 2126 CTTCAGAAACTAAGGAGGAGTTTTATATTAAGGGAGACATTTTAGTCAGTAAGACGATATAACCTACTTACTCC 2199
Query 1303 -------------------------------------------------------------------------- 1302
Sbjct 2200 GTAAGGGGAAATGAAGGCCCAGAGAAGGGAAGGGACTTGACCGAGGTCCCACTTCTGTTTCGAGGCAGAAGCCA 2273
Query 1303 -------------------------------------------------------------------------- 1302
Sbjct 2274 GACTAATTTTCATGCCTCCTGACTCCCAATCAGTTTCACAAAGGGATTCAATCTGTTTATATACGTTACATTCC 2347
Query 1303 -------------------------------------------------------------------------- 1302
Sbjct 2348 TGGATACGAGGTCTTTTGATGTTCAGAGTAACTGACTAGTTAGTATTAGAAGACCCTCGAGGTTTTTTTCCACA 2421
Query 1303 -------------------------------------------------------------------------- 1302
Sbjct 2422 GAAAAACATCTGAAGATGGATTGGGTGAGGGCTGGCAAAACGAAGGCATGCCGGGCCAGCTCCTTAACCCAATG 2495
Query 1303 -------------------------------------------------------------------------- 1302
Sbjct 2496 ACCCAGTGATGCTGCAAGGCTGGAACGGGGTCCAGGAGACTGTGTGTAACAGGTGCCCTAGGTGACCCTTATAA 2569
Query 1303 -------------------------------------------------------------------------- 1302
Sbjct 2570 TCAGGGAAGTTTGGTGAACAAAAATCGAACCCATGAGTGAACATAAATTAAAAAGTTGATCAACCTATTAAAAT 2643
Query 1303 -------------------------------------------------------------------------- 1302
Sbjct 2644 GTGTATTTCATTGGGTAGCTTTTCTCACTGTAGACAGATTTTTTCCTTCTTCAATGAAAAGGCTTTTAAATTAG 2717
Query 1303 -------------------------------------------------------------------------- 1302
Sbjct 2718 TACAACTGTTACTATTTAAAAAAAAAATACCCTAAGTACTCTGTTTACTTCTGGTGAAACAAAACCAGTCATTA 2791
Query 1303 -------------------------------------------------------------------------- 1302
Sbjct 2792 GAAATGGTCTGTGCTTTTATTTTCCCAGACTGGAGTGGCTTTTCTGAAACACACACACACACACACACACACAC 2865
Query 1303 -------------------------------------------------------------------------- 1302
Sbjct 2866 ACACACACACACACACACACACACGTACACACATCCCTCACTTCTCTTAAGCCAAGAAGTTTGCTTTCCCTAGC 2939
Query 1303 -------------------------------------------------------------------------- 1302
Sbjct 2940 TGCAGTGTAGATGGCTCTTGTTTTTGTTTTTTTGTTTTAATCATTTGGCATTCACATGTGGCTGTTAATATGTG 3013
Query 1303 -------------------------------------------------------------------------- 1302
Sbjct 3014 CTTGTTTTTAATTAAAACAAGAAGCTTTAAACTGGTGTGTGGTGTTCTTAAAACCTTCTCAGCAGATTTCCCCG 3087
Query 1303 -------------------------------------------------------------------------- 1302
Sbjct 3088 TGGTGATGGCCCAGCAATGACCCCCATTTCTAACCTGTCTTCTCACACTACAATCTGTGCTACCTCAATATTGC 3161
Query 1303 -------------------------------------------------------------------------- 1302
Sbjct 3162 CCATTCCCCTCCCCCTGTCTTACTTTGAATGTCCTCTTTCTTTGGCTAATTTCATGTTTTCTTTCTCTTTCTCT 3235
Query 1303 -------------------------------------------------------------------------- 1302
Sbjct 3236 CTCCTTTCCAGCTTTTTTTAATCTTGTCTTCAGCAGCTGCACTAAGTCTAAAGGAGAAGACTGCCATTATAGAA 3309
Query 1303 -------------------------------------------------------------------------- 1302
Sbjct 3310 GAGTTAGGGTTCCATATTGTCTCAAATCAGAAATCAACCAATTTCCTCTCCCCTCAAACTGCAAGCACACACAC 3383
Query 1303 -------------------------------------------------------------------------- 1302
Sbjct 3384 ATACACCACACCACTCAACAAGTGTTCATGTGTCCCTGTGTCCAGGCAAGAAGCTCTCTTCCTGACTCACATGG 3457
Query 1303 -------------------------------------------------------------------------- 1302
Sbjct 3458 TATTTTAAATGGAAGTGTCTTGTCCTAACTAACAAGGCAGGAAAAGAACCATCAGAGCTGGAAAATGGACGAAA 3531
Query 1303 -------------------------------------------------------------------------- 1302
Sbjct 3532 TGTAACCTCAGAGAAACAACTACAGGACCACTCACCCAAGTGTAAGTGACTGGGGCAGGACACCTCAGCTGTGG 3605
Query 1303 -------------------------------------------------------------------------- 1302
Sbjct 3606 GTATGAAAGTACTGTTCTGTTCACAAGGTTTTGTTTGAGTTTTATGTTTTTCTTTTAAACATTTCTCTGGTTCG 3679
Query 1303 -------------------------------------------------------------------------- 1302
Sbjct 3680 ATGGGTTGACTGTCTACAGCCACTGTTAAACATTTCTGAATATGCAAGAGAAAGTCAAGTGACATTTGTATCTT 3753
Query 1303 -------------------------------------------------------------------------- 1302
Sbjct 3754 CTTCAGCATTCGCAGACCTTCTATAGATTCCAGCAAAGGGGGAAAATGTATCCACTATCTAACACTTAGGTAGA 3827
Query 1303 -------------------------------------------------------------------------- 1302
Sbjct 3828 GAAGGGAGGGGGTTTAAGCTTAGTGAGGGCAAAATTACTCCATTCCACCTTCCGAGACCAGTTAGGGTTTTGAG 3901
Query 1303 -------------------------------------------------------------------------- 1302
Sbjct 3902 AGAGGTTTCTGCTCAACCTGGGATCTGGAGGGAGAGCTTTGATGTTGGTAAATCTGCCTTGAATTCATTGGTTT 3975
Query 1303 -------------------------------------------------------------------------- 1302
Sbjct 3976 AACTTGCATCAAAATACCATGTGAGTGTGCTCATTCTCATATATCCCCTACCACCATCACCACCATTCTGCTGT 4049
Query 1303 -------------------------------------------------------------------------- 1302
Sbjct 4050 TCAGTGTCTCTTGAGAGAGCCTCTTTGCATGTTTTCCAGAATCTGTGTGTGTTTTTCCTTTCTTCTCCTTTGTT 4123
Query 1303 -------------------------------------------------------------------------- 1302
Sbjct 4124 CTTTTTGCTCAAAGGTGTGACCAGTCATTGCCCCTCTGGGGCTTTCATTCTCCAGGAGAAACATCCCAGAACCA 4197
Query 1303 -------------------------------------------------------------------- 1302
Sbjct 4198 GCACTGTTTAGCCTGATACCTTTCTAATGTCCATGTCAATTTTCAATAAAATTCAAAGAAATGCTAAA 4265
