Nucleotide Global Alignment
Description
- Query:
- TRCN0000479117
- Subject:
- NM_001163420.1
- Aligned Length:
- 1252
- Identities:
- 815
- Gaps:
- 335
Alignment
Query 1 ATGTCTATTTCCTTGAGCTCTTTAATTTTGTTGCCAATTTGGATAAACATGGCACAAATCCAGCAGGGAGGTCC 74
Sbjct 1 -------------------------------------------------------------------------- 0
Query 75 AGATGAAAAAGAAAAGACTACCGCACTGAAAGATTTATTATCTAGGATAGATTTGGATGAACTAATGAAAAAAG 148
||||||||.|
Sbjct 1 ----------------------------------------------------------------ATGAAAAAGG 10
Query 149 ATGAACCGCCTCTTGATTTTCCTGATACCCTGGAAGGATTTGAATATGCTTTTAATGAAAAGGGACAGTTAAGA 222
|.|||||.|||.||||||||||.|||||.||||||||.||||||||||||||||||||||||||.|||||||||
Sbjct 11 ACGAACCACCTTTTGATTTTCCAGATACACTGGAAGGCTTTGAATATGCTTTTAATGAAAAGGGGCAGTTAAGA 84
Query 223 CACATAAAAACTGGGGAACCATTTGTTTTTAACTACCGGGAAGATTTACACAGATGGAACCAGAAAAGATACGA 296
||||||||||||||||||||||||||||||||||||||.|||||.||||||||.|||||||||||||||||.||
Sbjct 85 CACATAAAAACTGGGGAACCATTTGTTTTTAACTACCGAGAAGACTTACACAGGTGGAACCAGAAAAGATATGA 158
Query 297 GGCTCTAGGAGAGATCATCACGAAG-TATGTATATGAGCTCCTGGAAAAGGATTGTAATTTGAAAAAAGTATCT 369
.|||||.||.||||||||||| ||| |||||.||||||||||||||||..||.|||||||||||||||.|.|||
Sbjct 159 AGCTCTGGGCGAGATCATCAC-AAGATATGTTTATGAGCTCCTGGAAAGTGACTGTAATTTGAAAAAAATCTCT 231
Query 370 ATTCCAGTAGATGCCACTGAGAGTGAACCAAAGAGTTTTATCTTTATGAGTGAGGATGCTTTGACAAATCCACA 443
||||||
Sbjct 232 ATTCCA-------------------------------------------------------------------- 237
Query 444 GAAACTGATGGTTTTAATTCATGGTAGTGGTGTTGTCAGGGCAGGGCAGTGGGCTAGAAGACTTATTATAAATG 517
Sbjct 238 -------------------------------------------------------------------------- 237
Query 518 AAGATCTGGACAGTGGCACACAGATACCGTTTATTAAAAGAGCTGTGGCTGAAGGATATGGAGTAATAGTACTA 591
|||||.||||||||.||.||.||.
Sbjct 238 --------------------------------------------------GAAGGGTATGGAGTCATCGTCCTG 261
Query 592 AATCCCAATGAAAACTATATTGAAGTAGAAAAGCCGAAGATACACGTACAGTCATCA---TCTGATAGTTCAGA 662
||.||.||||||||||||||.|||||.|||||||.|||.||.||...|||||||||| ||||||.||.||||
Sbjct 262 AACCCAAATGAAAACTATATAGAAGTGGAAAAGCAGAAAATGCATAAACAGTCATCATCTTCTGATGGTACAGA 335
Query 663 TGAACCAGCAGAAAAACGGGAAAGAAAAGATAAAGTTTCTAAAGAAACAAAGAAGCGACGTGATTTCTATGAGA 736
|||.|||||||..||.||||||||.|.||||||.||.||.||.||||||||||||||.||||||||||||||||
Sbjct 336 TGAGCCAGCAGGGAAGCGGGAAAGGAGAGATAAGGTCTCCAAGGAAACAAAGAAGCGTCGTGATTTCTATGAGA 409
Query 737 AGTATCGTAACCCCCAAAGAGAAAAAGAAATGATGCAATTGTATATCAGAGAAAATGGTTCTCCTGAAGAACAT 810
||||.||.|||||.||||..||.||||||||||||||.||||.||||||.||||||||||||||||||||.|||
Sbjct 410 AGTACCGCAACCCTCAAAAGGAGAAAGAAATGATGCAGTTGTTTATCAGGGAAAATGGTTCTCCTGAAGAGCAT 483
Query 811 GCAATCTATGTTTGGGATCATTTCATAGCTCAGGCTGCTGCTGAGAATGTGTTTTTCGTTGCTCACAGCTATGG 884
||..|||||||.|||||.|||||||||||.|||||||||||||||||||||||.||.||.|||||.||||||||
Sbjct 484 GCGGTCTATGTGTGGGACCATTTCATAGCCCAGGCTGCTGCTGAGAATGTGTTCTTTGTGGCTCATAGCTATGG 557
Query 885 AGGACTTGCTTTTGTTGAACTGATGATTCAACGAGAAGCCGATGTAAAAAATAAGGTAACTGCTGTGGCATTGA 958
|||||||||||||||||||||||||||||||||||||||.||||||||||.||||||.||||||||||||||||
Sbjct 558 AGGACTTGCTTTTGTTGAACTGATGATTCAACGAGAAGCAGATGTAAAAAGTAAGGTGACTGCTGTGGCATTGA 631
Query 959 CAGACTCTGTTCACAATGTGTGGCATCAAGAAGCTGGCAAAACGATTCGAGAATGGATGAGAGAGAACTGTTGT 1032
|||||||||||||||||||||||||||||||||||||||||||.||.|||||||||||||||||||||||||||
Sbjct 632 CAGACTCTGTTCACAATGTGTGGCATCAAGAAGCTGGCAAAACCATCCGAGAATGGATGAGAGAGAACTGTTGT 705
Query 1033 AATTGGGTCTCTAGCTCAGAACCATTAGACACATCAGTGGAGTCCATGCTACCTGATTGCCCCCGGGTCTCAGC 1106
||.||||||||.|||||||||||||||||.|||||.|||||.||||||||.|||||.||.|||.|.||.||.||
Sbjct 706 AACTGGGTCTCCAGCTCAGAACCATTAGATACATCGGTGGAATCCATGCTGCCTGACTGTCCCAGAGTGTCTGC 779
Query 1107 AGGCACCGACCGTCACGAGCTAACTTCCTGGAAGAGCTTTCCGTCTATTTTCAAATTCTTTACCGAAGCCTCAG 1180
|||||||||||||||||||||.|||||||||||||||||.||||||||.|||||.|||||..|.||||||||.|
Sbjct 780 AGGCACCGACCGTCACGAGCTCACTTCCTGGAAGAGCTTCCCGTCTATCTTCAAGTTCTTCGCGGAAGCCTCGG 853
Query 1181 AGGCCAAGACCAGCTCCCTGAAGCCGGCTGTGACGCGCCGCTCCCACCGCATCAAGCACGAAGAGCTG 1248
|||||||||.||||||.|.|||||||||..|||||||.|||||.|||||.|||||||||||.||||||
Sbjct 854 AGGCCAAGAGCAGCTCGCAGAAGCCGGCCCTGACGCGGCGCTCGCACCGGATCAAGCACGAGGAGCTG 921