Nucleotide Global Alignment
Description
- Query:
- TRCN0000479180
- Subject:
- XM_011521590.2
- Aligned Length:
- 1522
- Identities:
- 623
- Gaps:
- 869
Alignment
Query 1 ---------------------------------ATGGATGAAAGGAACCGACAG---ACTTT----AAGA---- 30
||||||||||||||||||||| ||||| ||||
Sbjct 1 ATGGGGCGGAAGAAAATACAAATCACACGCATAATGGATGAAAGGAACCGACAGGTCACTTTTACAAAGAGAAA 74
Query 31 -------------AAGAAAGGC------CTTAATG------GT---TGTGA----------------------- 53
|||||||.| ||||.|| || |||||
Sbjct 75 GTTTGGATTAATGAAGAAAGCCTATGAACTTAGTGTGCTCTGTGACTGTGAAATAGCACTCATCATTTTCAACA 148
Query 54 -------------------------GAGCCCTGATGCTGACGA--TTACTT--------------------TG- 79
.|||.|||||...|||.| || ||| ||
Sbjct 149 GCTCTAACAAACTGTTTCAATATGCTAGCACTGATATGGACAAAGTT-CTTCTCAAGTATACAGAATATAATGA 221
Query 80 ----------AGCACAGTCCACT---------------CTC----------GGAGGACAGA------------- 105
||||.|..|.||| ||| |||..|||||
Sbjct 222 ACCTCATGAAAGCAGAACCAACTCGGATATTGTTGAGGCTCTGAACAAGAAGGAACACAGAGGGTGCGACAGCC 295
Query 106 -------------TTCA-----GCAAACT--AAAT---GAAGA---------------TAGTG----ATTTTAT 137
|||| ||.|||| |.|| ||||| ||.|| ||||.||
Sbjct 296 CAGACCCTGATACTTCATATGTGCTAACTCCACATACAGAAGAAAAATATAAAAAAATTAATGAGGAATTTGAT 369
Query 138 TTTCAA-ACGAGGC-----CCT---------------------CCTGGTCTGCCACCTCAGAACTTTTCAATGT 184
|| |.||.|| |.| |||||||||||||||||||||||||||||||
Sbjct 370 ----AATATGATGCGGAATCATAAAATCGCAGTGAGTACTAAACCTGGTCTGCCACCTCAGAACTTTTCAATGT 439
Query 185 CTGTCACAGTTCCAGTGACCAGCCCCAATGCTTTGTCCTACACTAACCCAGGGAGTTCACTGGTGTCCCCATCT 258
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 440 CTGTCACAGTTCCAGTGACCAGCCCCAATGCTTTGTCCTACACTAACCCAGGGAGTTCACTGGTGTCCCCATCT 513
Query 259 TTGGCAGCCAGCTCAACGTTAACAGATTCAAGCATGCTCTCTCCACCTCAAACCACATTACATAGAAATGTGTC 332
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 514 TTGGCAGCCAGCTCAACGTTAACAGATTCAAGCATGCTCTCTCCACCTCAAACCACATTACATAGAAATGTGTC 587
Query 333 TCCTGGAGCTCCTCAGAGACCACCAAGTACTGGCAATGCAGGTGGGATGTTGAGCACTACAGACCTCACAGTGC 406
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 588 TCCTGGAGCTCCTCAGAGACCACCAAGTACTGGCAATGCAGGTGGGATGTTGAGCACTACAGACCTCACAGTGC 661
Query 407 CAAATGGAGCTGGAAGCAGTCCAGTGGGGAATGGATTTGTAAACTCAAGAGCTTCTCCAAATTTGATTGGAGCT 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 662 CAAATGGAGCTGGAAGCAGTCCAGTGGGGAATGGATTTGTAAACTCAAGAGCTTCTCCAAATTTGATTGGAGCT 735
Query 481 ACTGGTGCAAATAGCTTAGGCAAAGTCATGCCTACAAAGTCTCCCCCTCCACCAGGTGGTGGTAATCTTGGAAT 554
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 736 ACTGGTGCAAATAGCTTAGGCAAAGTCATGCCTACAAAGTCTCCCCCTCCACCAGGTGGTGGTAATCTTGGAAT 809
Query 555 GAACAGTAGGAAACCAGATCTTCGAGTTGTCATCCCCCCTTCAAGCAAGGGCATGATGCCTCCACTAAACACCC 628
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |.|.||
Sbjct 810 GAACAGTAGGAAACCAGATCTTCGAGTTGTCATCCCCCCTTCAAGCAAGGGCATGATGCCTCCACT--AGATCC 881
Query 629 AA---AGGAT----CAGTAGTTCTCAAGCCACTCA-ACCTCTTGCTACCCCAGTCGTGTCTGTGACAACCCCAA 694
|| ||||| ||.|| |.|..|| ||.||| ..|||||
Sbjct 882 AATCCAGGATACCACATTA--TATTTAG-CAATCATGTCTCTT------------------------------- 921
Query 695 GCTTGCCTCCGCAAGGACTTGTGTACTCAGCAATGCCGACTGCCTACAACACTGATTATTCACTGACCAGCGCT 768
Sbjct 922 -------------------------------------------------------------------------- 921
Query 769 GACCTGTCAGCCCTTCAAGGCTTCAACTCGCCAGGAATGCTGTCGCTGGGACAGGTGTCGGCCTGGCAGCAGCA 842
Sbjct 922 -------------------------------------------------------------------------- 921
Query 843 CCACCTAGGACAAGCAGCCCTCAGCTCTCTTGTTGCTGGAGGGCAGTTATCTCAGGGTTCCAATTTATCCATTA 916
Sbjct 922 -------------------------------------------------------------------------- 921
Query 917 ATACCAACCAAAACATCAGCATCAAGTCCGAACCGATTTCACCTCCTCGGGATCGTATGACCCCATCGGGCTTC 990
Sbjct 922 -------------------------------------------------------------------------- 921
Query 991 CAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCCGCCGCCACCACCGCAGCCCCAGCCACAACCCCCGCAGCC 1064
Sbjct 922 -------------------------------------------------------------------------- 921
Query 1065 CCAGCCCCGACAGGAAATGGGGCGCTCCCCTGTGGACAGTCTGAGCAGCTCTAGTAGCTCCTATGATGGCAGTG 1138
Sbjct 922 -------------------------------------------------------------------------- 921
Query 1139 ATCGGGAGGATCCACGGGGCGACTTCCATTCTCCAATTGTGCTTGGCCGACCCCCAAACACTGAGGACAGAGAA 1212
Sbjct 922 -------------------------------------------------------------------------- 921
Query 1213 AGCCCTTCTGTAAAGCGAATGAGGATGGACGCGTGGGTGACC 1254
Sbjct 922 ------------------------------------------ 921