Nucleotide Global Alignment
Description
- Query:
- TRCN0000479282
- Subject:
- XM_006530261.3
- Aligned Length:
- 2205
- Identities:
- 1470
- Gaps:
- 408
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGCGTAGCTCTGAGGGCGCGCCGTCCTGGGCTGTGGCTTTGCCCCCGCCGCTGCGGCCGTGCGCCTATGGCGT 74
Query 1 -------------------------------------------------------ATGAACCCTCCGGCAGCCT 19
|||||||||.||||..|||
Sbjct 75 CTCGGAGGTGACCCGCTGCTGGCACCAACTCTCTCTGGGGGCGGGGGAGTCATCCATGAACCCTTCGGCGACCT 148
Query 20 T---CCTTGCCGGGCGCCAGAACATCGGGTCAGAAGTTGAGATTTCCACTATCGAGAAACAACGGAAGGAGCTG 90
| || ||||||||||||||||.|||||||||||||.|||||||||.|||||.||.||||||||.||.
Sbjct 149 TATACC------GGCGCCAGAACATCGGATCAGAAGTTGAGACTTCCACTATTGAGAAGCAGCGGAAGGAACTT 216
Query 91 CAGTTGCTCATTGGAGAATTAAAAGATCGAGATAAAGAGCTCAATGACATGGTTGCAGTGCACCAGCAACAGCT 164
|||.|||||||.||.||..|.|||||.||.|||||.|||||||||||||||||.||||||||.|||...|||||
Sbjct 217 CAGCTGCTCATCGGGGAGCTGAAAGACCGCGATAAGGAGCTCAATGACATGGTCGCAGTGCATCAGAGGCAGCT 290
Query 165 TCTTTCATGGGAAGAGGATCGGCAGAAAGTGTTGACACTGGAAGAACGTTGCAGCAAATTAGAAGGTGAACTAC 238
|||.||.|||||||||||.||||||||||||.||||.|||||.||.||.||||||||..|.||||||||.||.|
Sbjct 291 TCTCTCCTGGGAAGAGGACCGGCAGAAAGTGCTGACCCTGGAGGAGCGCTGCAGCAAGCTCGAAGGTGAGCTGC 364
Query 239 ATAAAAGAACTGAAATAATCAGGTAGACT--CCAAGAAGGTAAAAGCTCTTGAATCACAATCAAATGGAATGCC 310
|||||||.|||||.|||||||.|| .||| ..||||||||.||..|.||.||.|| |||||||...||.||||
Sbjct 365 ATAAAAGGACTGACATAATCAAGT-CACTGATGAAGAAGGTCAAGACCCTGGAGTC-CAATCAAGCAGAGTGCC 436
Query 311 AAACAGCTCTCCAAAAGACCCAACTACAGCTTCAGGAAATGGCTCAAAAGGCAACGCATTCTTCTCTTCTCTCT 384
|.||||||||.||.|||||.||.|..|||||.|||||.||||||||.|||||.||.||.||..|.||.|||||.
Sbjct 437 AGACAGCTCTTCAGAAGACGCAGCAGCAGCTCCAGGAGATGGCTCAGAAGGCCACACACTCCACCCTCCTCTCG 510
Query 385 GAAGACCTTGAGGCTAGAAACGAAACTCTCAGCAACACGTTAGTGGAACTTTCTGCCCAGGTAGGACAGCTACA 458
||||||||||||||||||||.||||.||||||||.||||||||||||.||.|||||.|||||||||||..|.||
Sbjct 511 GAAGACCTTGAGGCTAGAAATGAAAATCTCAGCAGCACGTTAGTGGACCTCTCTGCTCAGGTAGGACAATTGCA 584
Query 459 AGCTCGAGAACAAGCTCTTACGACAATGATAAAGCTAAAGGACAAAGATATTATTGAGGCAGTTAATCACATTG 532
||||.||||.||.|||||.||.||.|||||||||||||||||||||||.|||||||||||.||.|||||||||.
Sbjct 585 AGCTAGAGAGCAGGCTCTCACTACCATGATAAAGCTAAAGGACAAAGACATTATTGAGGCCGTCAATCACATTT 658
Query 533 CAGATTGTTCGGGTAAATTTAAAATGCTAGAGCATGCCCTACGTGATGCCAAGATGGCGGAGACTTGTATTGTG 606
||||.||.|||||||||||||||.||.|||||||.||..|||||||||||||||||||||||||.|||.|.|||
Sbjct 659 CAGACTGCTCGGGTAAATTTAAATTGTTAGAGCACGCTTTACGTGATGCCAAGATGGCGGAGACGTGTGTGGTG 732
Query 607 AAAGAAAAGCAAGATTATAAGCAGAAATTGAAGGCACTTAAGATTGAAGTCAACAAACTAAAAGAGGACCTCAA 680
|.||||||||||||||||||||||||||||||||||||||.||||||||||||.|||||.||||||||.||.||
Sbjct 733 AGAGAAAAGCAAGATTATAAGCAGAAATTGAAGGCACTTAGGATTGAAGTCAATAAACTGAAAGAGGATCTAAA 806
Query 681 TGAAAAGACGACAGAAAATAATGAGCAACGAGAAGAGATCATTCGCCTCAAGCAAGAGAAAAGTTGCCTGCACG 754
|||.|||||.||||||||.|||||.||||||||.|||||.|||||.|||||||||||||||||.||.||.||.|
Sbjct 807 TGAGAAGACAACAGAAAACAATGAACAACGAGAGGAGATAATTCGACTCAAGCAAGAGAAAAGCTGTCTACATG 880
Query 755 ATGAATTGCTTTTTACTGTAGAGAGAGAAAAGAGGAAAGATGAATTGCTTAATATTGCGAAGTCAAAGCAAGAA 828
||||..|..||||||||||.|||||.||||||||||||||||||||.|||.|||||||.||||||||||||||.
Sbjct 881 ATGAGCTAATTTTTACTGTTGAGAGGGAAAAGAGGAAAGATGAATTACTTGATATTGCAAAGTCAAAGCAAGAT 954
Query 829 CGCACAAATTCAGAACTGCACAATCTGAGACAGATTTATGTAAAACAACAGAGTGATCTGCAGTTTCTTAATTT 902
||.||||||||.||.||.||.||||||||||||||||||||||||||.||||||||.|||||||||||||||||
Sbjct 955 CGTACAAATTCCGAGCTCCAGAATCTGAGACAGATTTATGTAAAACAGCAGAGTGACCTGCAGTTTCTTAATTT 1028
Query 903 CAATGTGGAAAATTCTCAGGAATTAATACAGATGTATGACTCAAAGATGGAGGAATCAAAGGCTCTGGACTCCA 976
||||.|.||||.||||||||||||||||||.||..|||.||.|||||||||||||.|||||||.|||
Sbjct 1029 CAATATAGAAAGTTCTCAGGAATTAATACAAATACATGGCTTAAAGATGGAGGAACCAAAGGCCCTG------- 1095
Query 977 GCAGAGACATGTGTTTATCAGACCTTGAAAATAACCACCCAAAAGTCGATATTAAGAGGGAAAAAAATCAGAAG 1050
Sbjct 1096 -------------------------------------------------------------------------- 1095
Query 1051 TCACTGTTTAAGGACCAGAAATTTGAAGCCATGTTGGTTCAGCAAAATAGGTCAGACAAGAGCTCTTGCGATGA 1124
||
Sbjct 1096 ------------------------------------------------------------------------GA 1097
Query 1125 ATGCAAAGAGAAGAAACAACAGATCGATACTGTGTTTGGGGAGAAAAGTGTAATTAAGCTGTCATCCATATTCA 1198
.||||.|||||||||.|.||||.|..|.||||...|.|||||.||||||||||||...||.|||||..||||.|
Sbjct 1098 GTGCAGAGAGAAGAAGCTACAGGTTAACACTGCACTCGGGGAAAAAAGTGTAATTGCTCTCTCATCTCTATTTA 1171
Query 1199 CCAAAGACTTAGTAGAGAAACACAACCTCCCTTGGTCTCTGGGAGGAAAAACCCAGATTGAACCCGAAAACAAA 1272
|||||||||||.|.||.|||||.|| ..|||||||||||||.||.||||.|||||.||||||.|||||||||
Sbjct 1172 CCAAAGACTTACTGGACAAACAAAA---GTCTTGGTCTCTGGGTGGGAAAATCCAGACTGAACCGGAAAACAAA 1242
Query 1273 ATTACATTGTGCAAGATCCACACAAAATCACCAAAATGTCATGGCACTGGGG-TTCAGAAC-GAAGGAAAACAA 1344
.||||..|.||||||.||||..||||.|||||||||||..|||| |.||||| ||| .||| ||||..||.||.
Sbjct 1243 GTTACCCTATGCAAGGTCCATGCAAAGTCACCAAAATGCGATGG-AGTGGGGCTTC-CAACGGAAGAGAAGCAG 1314
Query 1345 CCCTCAGAAACACC---CACTTTATCTGATGAGAAGCAGTGGCATGATGTCAGTGTTTACCTGGGCCTGACCAA 1415
|.|||.|||||..| |.|..|.|||||.|||||||||||||||||..|||..||.|||||||||||..|||.
Sbjct 1315 CTCTCGGAAACCTCCGTCTCGCTGTCTGACGAGAAGCAGTGGCATGACATCAACGTCTACCTGGGCCTTTCCAG 1388
Query 1416 CTGTCCAAGTTCAAAACATCCAGAAAAGCTGGATGTAGAATGTCAAGATCAGATGGAAAGG----TCCGAAATC 1485
|| |.||||||||.|||||.|.||||||.|..||..|.||.||.| |.|.||| ||.||..||
Sbjct 1389 CT------GCTCAAAACAGCCAGACAGGCTGGACGGGGATGGCCACGACC----GCACAGGAACATCTGAGGTC 1452
Query 1486 TCATGCTGCCAGAA----AAATGAAGCCTGTCTGGGCGAAAGTGGCATGTGTGACTCCAAGTGCTGCCACCCGA 1555
||.|||||| | |||||.||.||||.|.||.||.|.||.|.|||..||.|||||||||||||||||.|
Sbjct 1453 TCCTGCTGC----ACCCCAAATGTAGTCTGTATAGGTGACAATGACCTGTCCGAGTCCAAGTGCTGCCACCCAA 1522
Query 1556 GTAACTTCATAATTGAAGCCCCAGGCCACATGTCTGACGTGGAGTGGATGAGTATTTTCAAGCCTTCCAAAATG 1629
|||||.||||.||.|||||||||||.||.|||.||||....||||||||||.|||||||||||||||||.|...
Sbjct 1523 GTAACATCATCATCGAAGCCCCAGGACATATGACTGATACAGAGTGGATGAATATTTTCAAGCCTTCCAGAGCA 1596
Query 1630 CAGAGAATTGTCCGCCTCAAATCTGGGTGCACCTGTTCAGAAAGCATCTGT-GGCACA---CAACATGACTCCC 1699
||.||.|||||.||||.||||.|...||||||.||||||..||| ||| .||.|| .||.||.|.|||.
Sbjct 1597 CAAAGGATTGTTCGCCACAAAACCATGTGCACTTGTTCAAGAAG----TGTCAGCGCAATGAAATATAATTCCT 1666
Query 1700 CGGCAAGTGAGCTAATTGCCATCCAAGATTCCCACTCTTTGGGTTCTTCAAAATCTGCCTTG--AGAGAAGATG 1771
|.|||||||||||.||||.|||.||...||||||.|.|.|||||||.|.|||.||||| || ||||||||.|
Sbjct 1667 CAGCAAGTGAGCTCATTGGCATGCAGCCTTCCCAGTGTGTGGGTTCCTTAAAGTCTGC--TGAAAGAGAAGAGG 1738
Query 1772 AGACGGAGTCCTCTTCCAATAAAAAGAACTCACCTACGAGTTTGTTAATCTACAAAGATGCACCAGCATTCAAT 1845
||.|.|.|.|| |||||....|.|||| |||| |||| ||||
Sbjct 1739 AGTCAGCGGCC-CTTCCTGACAGAAGA----ACCT----------------------------CAGC---CAAT 1776
Query 1846 GAAAAGGCTTCAATTGTGTTACCCTCCCAGGATGATTTCTCGCCCACGAGCAAGCTCCAGCGTTTGCTGGCGGA 1919
|||| |||||||.|||||.||.|||||.|||||||||||..|||||||.||
Sbjct 1777 GAAA------------------------AGGATGACTTCTCTCCTACGAGTAAGCTCCAGCGGCTGCTGGCCGA 1826
Query 1920 ATCTCGTCAGATGGTGACGGACCTGGAGCTGAGCACACTGCTGCCCATCAGCCATGAGAATCTCACTGGCAGTG 1993
.||.||.||||||||.|||||.||||||||||||||.|||||.|||||||||...||||||||||
Sbjct 1827 GTCCCGGCAGATGGTCACGGATCTGGAGCTGAGCACGCTGCTACCCATCAGCTGCGAGAATCTCA--------- 1891
Query 1994 CCACAAATAAGTCAGAGGTCCCAGAAGAGTCAGCTCAAAAAAATACCTTTGTCAGTTAT 2052
.||.||..||.|.|||.|||.||||||||.|||.|.||||||..|||.||||||||.||
Sbjct 1892 ACAGAAGCAAATTAGAAGTCTCAGAAGAGCCAGATGAAAAAACCACCCTTGTCAGTCAT 1950